RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 TPTE2Q6XPS3 522 aa11.2□□□□□ -0.62
PCOLCE-209ENST00000490909 ZBTB3Q9H5J0 574 aa11.2□□□□□ -0.62
PCOLCE-209ENST00000490909 GPTP24298 496 aa11.19□□□□□ -0.62
PCOLCE-209ENST00000490909 NGEFQ8N5V2 710 aa11.19□□□□□ -0.62
PCOLCE-209ENST00000490909 PSMD1Q99460 953 aa11.19□□□□□ -0.62
PCOLCE-209ENST00000490909 HACL1Q9UJ83 578 aa11.19□□□□□ -0.62
PCOLCE-209ENST00000490909 ERVV-1B6SEH8 477 aa11.18□□□□□ -0.62
PCOLCE-209ENST00000490909 MYL6BP14649 208 aa11.18□□□□□ -0.62
PCOLCE-209ENST00000490909 HOXA10P31260 410 aaPredicted RBP11.18□□□□□ -0.62
PCOLCE-209ENST00000490909 VEGFBP49765 207 aa11.18□□□□□ -0.62
PCOLCE-209ENST00000490909 SCNN1DP51172 638 aa11.18□□□□□ -0.62
PCOLCE-209ENST00000490909 NFE2L2Q16236 605 aa11.18□□□□□ -0.62
PCOLCE-209ENST00000490909 PROSER3Q2NL68 480 aa11.18□□□□□ -0.62
PCOLCE-209ENST00000490909 SUSD4Q5VX71 490 aa11.18□□□□□ -0.62
PCOLCE-209ENST00000490909 MAP1SQ66K74 1059 aaPredicted RBP11.18□□□□□ -0.62
PCOLCE-209ENST00000490909 RTKN2Q8IZC4 609 aa11.18□□□□□ -0.62
PCOLCE-209ENST00000490909 SYNE4Q8N205 404 aa11.18□□□□□ -0.62
PCOLCE-209ENST00000490909 TMEM88BA6NKF7 163 aa11.17□□□□□ -0.62
PCOLCE-209ENST00000490909 FMR1Q06787 632 aaKnown RBP eCLIP11.17□□□□□ -0.62
PCOLCE-209ENST00000490909 PDIA6Q15084 440 aa11.17□□□□□ -0.62
PCOLCE-209ENST00000490909 ZNF34Q8IZ26 560 aa11.17□□□□□ -0.62
PCOLCE-209ENST00000490909 GPC2Q8N158 579 aa11.17□□□□□ -0.62
PCOLCE-209ENST00000490909 RRP7AQ9Y3A4 280 aaKnown RBP11.17□□□□□ -0.62
PCOLCE-209ENST00000490909 ERBB4Q15303 1308 aa11.16□□□□□ -0.62
PCOLCE-209ENST00000490909 PPEF1O14829 653 aaPredicted RBP11.16□□□□□ -0.62
PCOLCE-209ENST00000490909 ANXA1P04083 346 aa11.16□□□□□ -0.62
PCOLCE-209ENST00000490909 ALDH1B1P30837 517 aa11.16□□□□□ -0.62
PCOLCE-209ENST00000490909 GIGYF2Q6Y7W6 1299 aaKnown RBP11.16□□□□□ -0.62
PCOLCE-209ENST00000490909 KIF6Q6ZMV9 814 aa11.16□□□□□ -0.62
PCOLCE-209ENST00000490909 NYXQ9GZU5 481 aa11.16□□□□□ -0.62
PCOLCE-209ENST00000490909 ABCC4O15439 1325 aa11.15□□□□□ -0.62
PCOLCE-209ENST00000490909 RASSF10A6NK89 507 aa11.15□□□□□ -0.62
PCOLCE-209ENST00000490909 GTF2E1P29083 439 aaPredicted RBP11.15□□□□□ -0.62
PCOLCE-209ENST00000490909 PNISRQ8TF01 805 aaKnown RBP11.15□□□□□ -0.62
PCOLCE-209ENST00000490909 RPGRQ92834 1020 aaKnown RBP11.15□□□□□ -0.62
PCOLCE-209ENST00000490909 SCN9AQ15858 1988 aa11.15□□□□□ -0.62
PCOLCE-209ENST00000490909 ZNF646O15015 1829 aaPredicted RBP11.14□□□□□ -0.63
PCOLCE-209ENST00000490909 PSME4Q14997 1843 aa11.14□□□□□ -0.63
PCOLCE-209ENST00000490909 EPS15P42566 896 aa11.14□□□□□ -0.63
PCOLCE-209ENST00000490909 CNTROBQ8N137 903 aa11.14□□□□□ -0.63
PCOLCE-209ENST00000490909 WBP1LQ9NX94 342 aa11.14□□□□□ -0.63
PCOLCE-209ENST00000490909 GJA3Q9Y6H8 435 aa11.14□□□□□ -0.63
PCOLCE-209ENST00000490909 TCERG1O14776 1098 aaKnown RBP11.13□□□□□ -0.63
PCOLCE-209ENST00000490909 DDX10Q13206 875 aaKnown RBP11.13□□□□□ -0.63
PCOLCE-209ENST00000490909 AOC3Q16853 763 aa11.13□□□□□ -0.63
PCOLCE-209ENST00000490909 KRT24Q2M2I5 525 aa11.13□□□□□ -0.63
PCOLCE-209ENST00000490909 CC2D2BQ6DHV5 1058 aa11.13□□□□□ -0.63
PCOLCE-209ENST00000490909 PNMA8AQ86V59 439 aaPredicted RBP11.13□□□□□ -0.63
PCOLCE-209ENST00000490909 LARGE2Q8N3Y3 721 aa11.13□□□□□ -0.63
PCOLCE-209ENST00000490909 CRAMP1Q96RY5 1269 aa11.13□□□□□ -0.63
PCOLCE-209ENST00000490909 DDX21Q9NR30 783 aaKnown RBP eCLIP11.13□□□□□ -0.63
PCOLCE-209ENST00000490909 TSPYL4Q9UJ04 414 aa11.13□□□□□ -0.63
PCOLCE-209ENST00000490909 CLEC11AQ9Y240 323 aa11.13□□□□□ -0.63
PCOLCE-209ENST00000490909 MAPK8IP3Q9UPT6 1336 aa11.12□□□□□ -0.63
PCOLCE-209ENST00000490909 TRAF5O00463 557 aa11.12□□□□□ -0.63
PCOLCE-209ENST00000490909 HSPA8P11142 646 aaKnown RBP11.12□□□□□ -0.63
PCOLCE-209ENST00000490909 JDP2Q8WYK2 163 aa11.12□□□□□ -0.63
PCOLCE-209ENST00000490909 PRDM10Q9NQV6 1147 aa11.12□□□□□ -0.63
PCOLCE-209ENST00000490909 SPEF2Q9C093 1822 aa11.12□□□□□ -0.63
PCOLCE-209ENST00000490909 PPIP5K2O43314 1243 aa11.11□□□□□ -0.63
PCOLCE-209ENST00000490909 LBX1P52954 281 aa11.11□□□□□ -0.63
PCOLCE-209ENST00000490909 EIF6P56537 245 aaKnown RBP11.11□□□□□ -0.63
PCOLCE-209ENST00000490909 PARP10Q53GL7 1025 aa11.11□□□□□ -0.63
PCOLCE-209ENST00000490909 RBM17Q96I25 401 aaKnown RBP11.11□□□□□ -0.63
PCOLCE-209ENST00000490909 WDR33Q9C0J8 1336 aaKnown RBP11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 TNRC18O15417 2968 aaPredicted RBP11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 SLC34A2O95436 690 aa11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 EIF2S2P20042 333 aaKnown RBP11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 CTCFP49711 727 aaPredicted RBP11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 CST9Q5W186 159 aa11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 NLRP10Q86W26 655 aa11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 NIM1KQ8IY84 436 aa11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 ZNF428Q96B54 188 aa11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 RTFDC1Q9BY42 306 aaPredicted RBP11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 GPRC5DQ9NZD1 345 aa11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 ABT1Q9ULW3 272 aaKnown RBP11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 ATP6V0A2Q9Y487 856 aa11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 POLR2AP24928 1970 aaKnown RBP11.1□□□□□ -0.63
PCOLCE-209ENST00000490909 CASP8AP2Q9UKL3 1982 aa11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 SHTN1A0MZ66 631 aa11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 YDJCA8MPS7 323 aa11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 NEFMP07197 916 aa11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 HCLS1P14317 486 aaPredicted RBP11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 LMOD1P29536 600 aaPredicted RBP11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 TMPOP42166 694 aaKnown RBP11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 CXCL9Q07325 125 aa11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 DEFB115Q30KQ5 88 aa11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 SLC10A5Q5PT55 438 aa11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 CYP4F22Q6NT55 531 aa11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 PPP1R42Q7Z4L9 355 aa11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 XAGE3Q8WTP9 111 aa11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 NECTIN2Q92692 538 aa11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 UTP14AQ9BVJ6 771 aaKnown RBP11.09□□□□□ -0.63
PCOLCE-209ENST00000490909 GMPSP49915 693 aaPredicted RBP11.08□□□□□ -0.64
PCOLCE-209ENST00000490909 RIPK4P57078 832 aa11.08□□□□□ -0.64
PCOLCE-209ENST00000490909 KIAA2012Q0VF49 1180 aa11.08□□□□□ -0.64
PCOLCE-209ENST00000490909 RALBP1Q15311 655 aa11.08□□□□□ -0.64
PCOLCE-209ENST00000490909 GRIPAP1Q4V328 841 aa11.08□□□□□ -0.64
PCOLCE-209ENST00000490909 USP50Q70EL3 339 aaPredicted RBP11.08□□□□□ -0.64
PCOLCE-209ENST00000490909 COPS6Q7L5N1 327 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms