RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 RPGRQ92834 1020 aaKnown RBP20.59■□□□□ 0.89
NUP58-213ENST00000490231 CREBZFQ9NS37 354 aa20.59■□□□□ 0.89
NUP58-213ENST00000490231 NUP98P52948 1817 aa20.59■□□□□ 0.89
NUP58-213ENST00000490231 PARP10Q53GL7 1025 aa20.58■□□□□ 0.89
NUP58-213ENST00000490231 PPP1R42Q7Z4L9 355 aa20.58■□□□□ 0.89
NUP58-213ENST00000490231 EIF2S2P20042 333 aaKnown RBP20.57■□□□□ 0.88
NUP58-213ENST00000490231 RBM17Q96I25 401 aaKnown RBP20.57■□□□□ 0.88
NUP58-213ENST00000490231 CRAMP1Q96RY5 1269 aa20.57■□□□□ 0.88
NUP58-213ENST00000490231 HACL1Q9UJ83 578 aa20.57■□□□□ 0.88
NUP58-213ENST00000490231 SCN4AP35499 1836 aa20.57■□□□□ 0.88
NUP58-213ENST00000490231 MYBBP1AQ9BQG0 1328 aaKnown RBP20.56■□□□□ 0.88
NUP58-213ENST00000490231 JDP2Q8WYK2 163 aa20.56■□□□□ 0.88
NUP58-213ENST00000490231 PASKQ96RG2 1323 aa20.55■□□□□ 0.88
NUP58-213ENST00000490231 COL13A1Q5TAT6 717 aaPredicted RBP20.55■□□□□ 0.88
NUP58-213ENST00000490231 GPC2Q8N158 579 aa20.55■□□□□ 0.88
NUP58-213ENST00000490231 EPHX2P34913 555 aa20.54■□□□□ 0.88
NUP58-213ENST00000490231 PROSER3Q2NL68 480 aa20.54■□□□□ 0.88
NUP58-213ENST00000490231 SLC10A5Q5PT55 438 aa20.54■□□□□ 0.88
NUP58-213ENST00000490231 PNMA8AQ86V59 439 aaPredicted RBP20.54■□□□□ 0.88
NUP58-213ENST00000490231 NLRP3Q96P20 1036 aa20.54■□□□□ 0.88
NUP58-213ENST00000490231 RNF123Q5XPI4 1314 aa20.53■□□□□ 0.88
NUP58-213ENST00000490231 PPEF1O14829 653 aaPredicted RBP20.53■□□□□ 0.88
NUP58-213ENST00000490231 C3orf67Q6ZVT6 689 aa20.53■□□□□ 0.88
NUP58-213ENST00000490231 UTP14AQ9BVJ6 771 aaKnown RBP20.53■□□□□ 0.88
NUP58-213ENST00000490231 ANXA1P04083 346 aa20.52■□□□□ 0.88
NUP58-213ENST00000490231 HSPA1AP0DMV8 641 aaKnown RBP20.52■□□□□ 0.88
NUP58-213ENST00000490231 HSPA1BP0DMV9 641 aaKnown RBP20.52■□□□□ 0.88
NUP58-213ENST00000490231 DDX10Q13206 875 aaKnown RBP20.52■□□□□ 0.88
NUP58-213ENST00000490231 EAPPQ56P03 285 aaPredicted RBP20.52■□□□□ 0.88
NUP58-213ENST00000490231 HSP90AB3PQ58FF7 597 aa20.52■□□□□ 0.88
NUP58-213ENST00000490231 CHL1O00533 1208 aa20.51■□□□□ 0.87
NUP58-213ENST00000490231 ITGBL1O95965 494 aaPredicted RBP20.51■□□□□ 0.87
NUP58-213ENST00000490231 EIF6P56537 245 aaKnown RBP20.51■□□□□ 0.87
NUP58-213ENST00000490231 COPS6Q7L5N1 327 aa20.51■□□□□ 0.87
NUP58-213ENST00000490231 RUNDC1Q96C34 613 aa20.51■□□□□ 0.87
NUP58-213ENST00000490231 ADAMTSL1Q8N6G6 1762 aa20.5■□□□□ 0.87
NUP58-213ENST00000490231 CCDC146Q8IYE0 955 aa20.5■□□□□ 0.87
NUP58-213ENST00000490231 MKRN1Q9UHC7 482 aaKnown RBP20.5■□□□□ 0.87
NUP58-213ENST00000490231 COL4A5P29400 1685 aa20.49■□□□□ 0.87
NUP58-213ENST00000490231 NEUROD2Q15784 382 aa20.49■□□□□ 0.87
NUP58-213ENST00000490231 LARGE2Q8N3Y3 721 aa20.49■□□□□ 0.87
NUP58-213ENST00000490231 XAGE3Q8WTP9 111 aa20.49■□□□□ 0.87
NUP58-213ENST00000490231 TMX4Q9H1E5 349 aaPredicted RBP20.49■□□□□ 0.87
NUP58-213ENST00000490231 DDX21Q9NR30 783 aaKnown RBP eCLIP20.49■□□□□ 0.87
NUP58-213ENST00000490231 TRIM35Q9UPQ4 493 aa20.49■□□□□ 0.87
NUP58-213ENST00000490231 CLEC11AQ9Y240 323 aa20.49■□□□□ 0.87
NUP58-213ENST00000490231 ATP6V0A2Q9Y487 856 aa20.49■□□□□ 0.87
NUP58-213ENST00000490231 CNTNAP1P78357 1384 aa20.48■□□□□ 0.87
NUP58-213ENST00000490231 PCNTO95613 3336 aa20.48■□□□□ 0.87
NUP58-213ENST00000490231 TMEM88BA6NKF7 163 aa20.48■□□□□ 0.87
NUP58-213ENST00000490231 AIMP1Q12904 312 aaKnown RBP20.48■□□□□ 0.87
NUP58-213ENST00000490231 WDR43Q15061 677 aaKnown RBP eCLIP20.48■□□□□ 0.87
NUP58-213ENST00000490231 NLRP10Q86W26 655 aa20.48■□□□□ 0.87
NUP58-213ENST00000490231 NECTIN2Q92692 538 aa20.48■□□□□ 0.87
NUP58-213ENST00000490231 VPS33BQ9H267 617 aa20.48■□□□□ 0.87
NUP58-213ENST00000490231 TCERG1O14776 1098 aaKnown RBP20.47■□□□□ 0.87
NUP58-213ENST00000490231 TCIRG1Q13488 830 aa20.47■□□□□ 0.87
NUP58-213ENST00000490231 SLC51AQ86UW1 340 aa20.47■□□□□ 0.87
NUP58-213ENST00000490231 GJA3Q9Y6H8 435 aa20.47■□□□□ 0.87
NUP58-213ENST00000490231 ABCC4O15439 1325 aa20.47■□□□□ 0.87
NUP58-213ENST00000490231 HOXB7P09629 217 aa20.46■□□□□ 0.87
NUP58-213ENST00000490231 LMOD1P29536 600 aaPredicted RBP20.46■□□□□ 0.87
NUP58-213ENST00000490231 KRT24Q2M2I5 525 aa20.46■□□□□ 0.87
NUP58-213ENST00000490231 CNTROBQ8N137 903 aa20.46■□□□□ 0.87
NUP58-213ENST00000490231 BBOX1O75936 387 aa20.45■□□□□ 0.86
NUP58-213ENST00000490231 MAP1SQ66K74 1059 aaPredicted RBP20.45■□□□□ 0.86
NUP58-213ENST00000490231 NIM1KQ8IY84 436 aa20.45■□□□□ 0.86
NUP58-213ENST00000490231 TNS4Q8IZW8 715 aa20.45■□□□□ 0.86
NUP58-213ENST00000490231 SUPT20HQ8NEM7 779 aa20.45■□□□□ 0.86
NUP58-213ENST00000490231 RTFDC1Q9BY42 306 aaPredicted RBP20.45■□□□□ 0.86
NUP58-213ENST00000490231 TRMT112Q9UI30 125 aaKnown RBP20.45■□□□□ 0.86
NUP58-213ENST00000490231 ADAMTS8Q9UP79 889 aa20.45■□□□□ 0.86
NUP58-213ENST00000490231 LAS1LQ9Y4W2 734 aaKnown RBP20.45■□□□□ 0.86
NUP58-213ENST00000490231 PPIP5K2O43314 1243 aa20.44■□□□□ 0.86
NUP58-213ENST00000490231 HCLS1P14317 486 aaPredicted RBP20.44■□□□□ 0.86
NUP58-213ENST00000490231 SCNN1DP51172 638 aa20.44■□□□□ 0.86
NUP58-213ENST00000490231 HDGFL1Q5TGJ6 251 aa20.44■□□□□ 0.86
NUP58-213ENST00000490231 CHPF2Q9P2E5 772 aa20.44■□□□□ 0.86
NUP58-213ENST00000490231 SH3TC1Q8TE82 1336 aa20.44■□□□□ 0.86
NUP58-213ENST00000490231 AOC3Q16853 763 aa20.43■□□□□ 0.86
NUP58-213ENST00000490231 SP8Q8IXZ3 490 aa20.43■□□□□ 0.86
NUP58-213ENST00000490231 ANKRD36CQ5JPF3 1778 aa20.43■□□□□ 0.86
NUP58-213ENST00000490231 USP50Q70EL3 339 aaPredicted RBP20.42■□□□□ 0.86
NUP58-213ENST00000490231 DDX46Q7L014 1031 aaKnown RBP20.42■□□□□ 0.86
NUP58-213ENST00000490231 PLBD2Q8NHP8 589 aa20.42■□□□□ 0.86
NUP58-213ENST00000490231 CFAP44Q96MT7 982 aa20.42■□□□□ 0.86
NUP58-213ENST00000490231 DBF4Q9UBU7 674 aaPredicted RBP20.42■□□□□ 0.86
NUP58-213ENST00000490231 LTBP1Q14766 1721 aa20.41■□□□□ 0.86
NUP58-213ENST00000490231 EPS15P42566 896 aa20.41■□□□□ 0.86
NUP58-213ENST00000490231 VEGFBP49765 207 aa20.41■□□□□ 0.86
NUP58-213ENST00000490231 GRAPQ13588 217 aa20.41■□□□□ 0.86
NUP58-213ENST00000490231 DPP8Q6V1X1 898 aaPredicted RBP20.41■□□□□ 0.86
NUP58-213ENST00000490231 ANKRD13DQ6ZTN6 518 aa20.41■□□□□ 0.86
NUP58-213ENST00000490231 GRAPLQ8TC17 118 aaPredicted RBP20.41■□□□□ 0.86
NUP58-213ENST00000490231 RASSF10A6NK89 507 aa20.4■□□□□ 0.86
NUP58-213ENST00000490231 TMC4Q7Z404 712 aa20.4■□□□□ 0.86
NUP58-213ENST00000490231 MPNDQ8N594 471 aa20.4■□□□□ 0.86
NUP58-213ENST00000490231 ZNRF3Q9ULT6 936 aa20.4■□□□□ 0.86
NUP58-213ENST00000490231 KIAA2012Q0VF49 1180 aa20.39■□□□□ 0.85
NUP58-213ENST00000490231 ISCA1Q9BUE6 129 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms