RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 SUPT16HQ9Y5B9 1047 aaKnown RBP20.4■□□□□ 0.86
CLIC4-203ENST00000489758 ALDH1L1O75891 902 aa20.39■□□□□ 0.85
CLIC4-203ENST00000489758 CENPBP07199 599 aaPredicted RBP20.39■□□□□ 0.85
CLIC4-203ENST00000489758 GCKRQ14397 625 aa20.39■□□□□ 0.85
CLIC4-203ENST00000489758 C20orf194Q5TEA3 1177 aa20.39■□□□□ 0.85
CLIC4-203ENST00000489758 TMEM57Q8N5G2 664 aa20.39■□□□□ 0.85
CLIC4-203ENST00000489758 PANK1Q8TE04 598 aa20.39■□□□□ 0.85
CLIC4-203ENST00000489758 CWC25Q9NXE8 425 aaPredicted RBP20.39■□□□□ 0.85
CLIC4-203ENST00000489758 NUP98P52948 1817 aa20.39■□□□□ 0.85
CLIC4-203ENST00000489758 SERPINB2P05120 415 aa20.38■□□□□ 0.85
CLIC4-203ENST00000489758 PDE3AQ14432 1141 aa20.38■□□□□ 0.85
CLIC4-203ENST00000489758 FTSJ3Q8IY81 847 aaKnown RBP20.38■□□□□ 0.85
CLIC4-203ENST00000489758 PARP3Q9Y6F1 533 aa20.38■□□□□ 0.85
CLIC4-203ENST00000489758 ANKRD36CQ5JPF3 1778 aa20.38■□□□□ 0.85
CLIC4-203ENST00000489758 FAM177BA6PVY3 158 aa20.37■□□□□ 0.85
CLIC4-203ENST00000489758 PPP1R42Q7Z4L9 355 aa20.37■□□□□ 0.85
CLIC4-203ENST00000489758 NBPF5PQ86XG9 351 aaPredicted RBP20.37■□□□□ 0.85
CLIC4-203ENST00000489758 UTP14AQ9BVJ6 771 aaKnown RBP20.37■□□□□ 0.85
CLIC4-203ENST00000489758 MS4A1P11836 297 aa20.36■□□□□ 0.85
CLIC4-203ENST00000489758 PRR5LQ6MZQ0 368 aa20.36■□□□□ 0.85
CLIC4-203ENST00000489758 H7C1W4 665 aa20.35■□□□□ 0.85
CLIC4-203ENST00000489758 POLD1P28340 1107 aa20.35■□□□□ 0.85
CLIC4-203ENST00000489758 CASP7P55210 303 aa20.35■□□□□ 0.85
CLIC4-203ENST00000489758 TPTE2Q6XPS3 522 aa20.35■□□□□ 0.85
CLIC4-203ENST00000489758 SYNE4Q8N205 404 aa20.35■□□□□ 0.85
CLIC4-203ENST00000489758 ZBTB38Q8NAP3 1195 aaPredicted RBP20.35■□□□□ 0.85
CLIC4-203ENST00000489758 NYXQ9GZU5 481 aa20.35■□□□□ 0.85
CLIC4-203ENST00000489758 TRMT112Q9UI30 125 aaKnown RBP20.35■□□□□ 0.85
CLIC4-203ENST00000489758 NRXN2Q9P2S2 1712 aa20.35■□□□□ 0.85
CLIC4-203ENST00000489758 UTYO14607 1347 aa20.34■□□□□ 0.85
CLIC4-203ENST00000489758 DCAF8L1A6NGE4 600 aa20.34■□□□□ 0.85
CLIC4-203ENST00000489758 PCCAP05165 728 aaPredicted RBP20.34■□□□□ 0.85
CLIC4-203ENST00000489758 ERFEQ4G0M1 354 aa20.34■□□□□ 0.85
CLIC4-203ENST00000489758 NUTM1Q86Y26 1132 aa20.34■□□□□ 0.85
CLIC4-203ENST00000489758 CNBD1Q8NA66 436 aa20.34■□□□□ 0.85
CLIC4-203ENST00000489758 FAM89AQ96GI7 184 aa20.34■□□□□ 0.85
CLIC4-203ENST00000489758 USP44Q9H0E7 712 aa20.34■□□□□ 0.85
CLIC4-203ENST00000489758 ABCC12Q96J65 1359 aa20.34■□□□□ 0.85
CLIC4-203ENST00000489758 SH3TC1Q8TE82 1336 aa20.33■□□□□ 0.85
CLIC4-203ENST00000489758 GRM8O00222 908 aa20.33■□□□□ 0.85
CLIC4-203ENST00000489758 JARID2Q92833 1246 aaPredicted RBP20.33■□□□□ 0.85
CLIC4-203ENST00000489758 N4BP2Q86UW6 1770 aaPredicted RBP20.33■□□□□ 0.84
CLIC4-203ENST00000489758 NBPF7P0C2Y1 421 aaPredicted RBP20.32■□□□□ 0.84
CLIC4-203ENST00000489758 MVPQ14764 893 aaKnown RBP20.32■□□□□ 0.84
CLIC4-203ENST00000489758 SLC10A5Q5PT55 438 aa20.32■□□□□ 0.84
CLIC4-203ENST00000489758 ITPRIPQ8IWB1 547 aa20.32■□□□□ 0.84
CLIC4-203ENST00000489758 CCDC24Q8N4L8 307 aa20.32■□□□□ 0.84
CLIC4-203ENST00000489758 COG6Q9Y2V7 657 aa20.32■□□□□ 0.84
CLIC4-203ENST00000489758 CDHR2Q9BYE9 1310 aa20.31■□□□□ 0.84
CLIC4-203ENST00000489758 C10orf71Q711Q0 1435 aa20.31■□□□□ 0.84
CLIC4-203ENST00000489758 RTL5Q5HYW3 569 aaPredicted RBP20.31■□□□□ 0.84
CLIC4-203ENST00000489758 UBE3BQ7Z3V4 1068 aa20.31■□□□□ 0.84
CLIC4-203ENST00000489758 MEIS3Q99687 375 aa20.3■□□□□ 0.84
CLIC4-203ENST00000489758 C9orf78Q9NZ63 289 aaPredicted RBP20.3■□□□□ 0.84
CLIC4-203ENST00000489758 RIC1Q4ADV7 1423 aa20.29■□□□□ 0.84
CLIC4-203ENST00000489758 IRS4O14654 1257 aaPredicted RBP20.29■□□□□ 0.84
CLIC4-203ENST00000489758 ZBTB7BO15156 539 aaPredicted RBP20.29■□□□□ 0.84
CLIC4-203ENST00000489758 HCLS1P14317 486 aaPredicted RBP20.29■□□□□ 0.84
CLIC4-203ENST00000489758 GTF2E1P29083 439 aaPredicted RBP20.29■□□□□ 0.84
CLIC4-203ENST00000489758 ST5P78524 1137 aa20.29■□□□□ 0.84
CLIC4-203ENST00000489758 KAZALD1Q96I82 304 aa20.28■□□□□ 0.84
CLIC4-203ENST00000489758 BRIP1Q9BX63 1249 aa20.28■□□□□ 0.84
CLIC4-203ENST00000489758 NPHP1O15259 732 aa20.27■□□□□ 0.84
CLIC4-203ENST00000489758 C3orf67Q6ZVT6 689 aa20.27■□□□□ 0.84
CLIC4-203ENST00000489758 PLA2G12BQ9BX93 195 aa20.27■□□□□ 0.84
CLIC4-203ENST00000489758 AFDNP55196 1824 aaKnown RBP20.27■□□□□ 0.84
CLIC4-203ENST00000489758 KLRG2A4D1S0 409 aaPredicted RBP20.26■□□□□ 0.83
CLIC4-203ENST00000489758 SUCLG2Q96I99 432 aa20.26■□□□□ 0.83
CLIC4-203ENST00000489758 DDX19BQ9UMR2 479 aa20.26■□□□□ 0.83
CLIC4-203ENST00000489758 GNAI3P08754 354 aa20.25■□□□□ 0.83
CLIC4-203ENST00000489758 UBTFL1P0CB47 393 aaPredicted RBP20.25■□□□□ 0.83
CLIC4-203ENST00000489758 YY1P25490 414 aa20.25■□□□□ 0.83
CLIC4-203ENST00000489758 FOXO4P98177 505 aa20.25■□□□□ 0.83
CLIC4-203ENST00000489758 EPHA10Q5JZY3 1008 aa20.25■□□□□ 0.83
CLIC4-203ENST00000489758 CRBNQ96SW2 442 aa20.25■□□□□ 0.83
CLIC4-203ENST00000489758 TNRC6CQ9HCJ0 1690 aaKnown RBP20.25■□□□□ 0.83
CLIC4-203ENST00000489758 PDE8AO60658 829 aa20.24■□□□□ 0.83
CLIC4-203ENST00000489758 CRY2Q49AN0 593 aa20.24■□□□□ 0.83
CLIC4-203ENST00000489758 ZBTB40Q9NUA8 1239 aa20.24■□□□□ 0.83
CLIC4-203ENST00000489758 CD2APQ9Y5K6 639 aa20.24■□□□□ 0.83
CLIC4-203ENST00000489758 HSP90B1P14625 803 aaKnown RBP20.23■□□□□ 0.83
CLIC4-203ENST00000489758 DDX60Q8IY21 1712 aaKnown RBP20.22■□□□□ 0.83
CLIC4-203ENST00000489758 CSF1RP07333 972 aa20.22■□□□□ 0.83
CLIC4-203ENST00000489758 PDE6BP35913 854 aa20.22■□□□□ 0.83
CLIC4-203ENST00000489758 CTSWP56202 376 aa20.22■□□□□ 0.83
CLIC4-203ENST00000489758 SF3B3Q15393 1217 aaKnown RBP20.22■□□□□ 0.83
CLIC4-203ENST00000489758 ANKRD44Q8N8A2 993 aa20.22■□□□□ 0.83
CLIC4-203ENST00000489758 NLRP3Q96P20 1036 aa20.22■□□□□ 0.83
CLIC4-203ENST00000489758 LRRFIP2Q9Y608 721 aaKnown RBP20.22■□□□□ 0.83
CLIC4-203ENST00000489758 RABL6Q3YEC7 729 aaPredicted RBP20.21■□□□□ 0.83
CLIC4-203ENST00000489758 TTLL11Q8NHH1 800 aa20.21■□□□□ 0.83
CLIC4-203ENST00000489758 BICC1Q9H694 974 aaKnown RBP20.21■□□□□ 0.83
CLIC4-203ENST00000489758 ANKRD31Q8N7Z5 1873 aa20.21■□□□□ 0.83
CLIC4-203ENST00000489758 LAMB2P55268 1798 aa20.21■□□□□ 0.83
CLIC4-203ENST00000489758 GNAI2P04899 355 aa20.2■□□□□ 0.82
CLIC4-203ENST00000489758 SRGNP10124 158 aa20.2■□□□□ 0.82
CLIC4-203ENST00000489758 IRX6P78412 446 aaPredicted RBP20.2■□□□□ 0.82
CLIC4-203ENST00000489758 FHDC1Q9C0D6 1143 aaPredicted RBP20.2■□□□□ 0.82
CLIC4-203ENST00000489758 KIF13BQ9NQT8 1826 aa20.2■□□□□ 0.82
CLIC4-203ENST00000489758 CHRNA5P30532 468 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms