RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 NBPF14Q5TI25 921 aa18.7■□□□□ 0.58
PTK7-216ENST00000489707 NBPF10Q6P3W6 841 aaKnown RBP18.7■□□□□ 0.58
PTK7-216ENST00000489707 VSIG10Q8N0Z9 540 aa18.7■□□□□ 0.58
PTK7-216ENST00000489707 ZGPATQ8N5A5 531 aaKnown RBP18.7■□□□□ 0.58
PTK7-216ENST00000489707 NBPF15Q8N660 670 aa18.7■□□□□ 0.58
PTK7-216ENST00000489707 CCDC8Q9H0W5 538 aaPredicted RBP18.7■□□□□ 0.58
PTK7-216ENST00000489707 IL25Q9H293 177 aa18.7■□□□□ 0.58
PTK7-216ENST00000489707 SNX14Q9Y5W7 946 aa18.7■□□□□ 0.58
PTK7-216ENST00000489707 FSD2A1L4K1 749 aa18.7■□□□□ 0.58
PTK7-216ENST00000489707 H7C1W4 665 aa18.7■□□□□ 0.58
PTK7-216ENST00000489707 RFX5P48382 616 aaPredicted RBP18.7■□□□□ 0.58
PTK7-216ENST00000489707 PTPN12Q05209 780 aaKnown RBP18.7■□□□□ 0.58
PTK7-216ENST00000489707 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.7■□□□□ 0.58
PTK7-216ENST00000489707 RFX7Q2KHR2 1363 aa18.7■□□□□ 0.58
PTK7-216ENST00000489707 ZKSCAN1P17029 563 aaPredicted RBP18.69■□□□□ 0.58
PTK7-216ENST00000489707 CASP7P55210 303 aa18.69■□□□□ 0.58
PTK7-216ENST00000489707 TJP1Q07157 1748 aa18.69■□□□□ 0.58
PTK7-216ENST00000489707 KLHL40Q2TBA0 621 aa18.69■□□□□ 0.58
PTK7-216ENST00000489707 UPF3BQ9BZI7 483 aaKnown RBP18.69■□□□□ 0.58
PTK7-216ENST00000489707 PLCH1Q4KWH8 1693 aa18.69■□□□□ 0.58
PTK7-216ENST00000489707 ATP5JP18859 108 aa18.68■□□□□ 0.58
PTK7-216ENST00000489707 MRE11P49959 708 aa18.68■□□□□ 0.58
PTK7-216ENST00000489707 FSD1Q9BTV5 496 aa18.68■□□□□ 0.58
PTK7-216ENST00000489707 TM6SF1Q9BZW5 370 aa18.68■□□□□ 0.58
PTK7-216ENST00000489707 SNRKQ9NRH2 765 aa18.68■□□□□ 0.58
PTK7-216ENST00000489707 TNNI3KQ59H18 835 aa18.68■□□□□ 0.58
PTK7-216ENST00000489707 TICAM2Q86XR7 235 aa18.68■□□□□ 0.58
PTK7-216ENST00000489707 FPGT-TNNI3KV9GXZ4 949 aa18.68■□□□□ 0.58
PTK7-216ENST00000489707 ITGB4P16144 1822 aa18.68■□□□□ 0.58
PTK7-216ENST00000489707 CCDC171Q6TFL3 1326 aa18.67■□□□□ 0.58
PTK7-216ENST00000489707 LRP6O75581 1613 aa18.67■□□□□ 0.58
PTK7-216ENST00000489707 RNF20Q5VTR2 975 aa18.67■□□□□ 0.58
PTK7-216ENST00000489707 FAM43AQ8N2R8 423 aa18.67■□□□□ 0.58
PTK7-216ENST00000489707 KLHDC4Q8TBB5 520 aa18.67■□□□□ 0.58
PTK7-216ENST00000489707 COL22A1Q8NFW1 1626 aaPredicted RBP18.67■□□□□ 0.58
PTK7-216ENST00000489707 KCNB2Q92953 911 aa18.66■□□□□ 0.58
PTK7-216ENST00000489707 ATG3Q9NT62 314 aa18.66■□□□□ 0.58
PTK7-216ENST00000489707 DDX49Q9Y6V7 483 aaKnown RBP18.66■□□□□ 0.58
PTK7-216ENST00000489707 A1BGP04217 495 aa18.66■□□□□ 0.58
PTK7-216ENST00000489707 KCNJ4P48050 445 aa18.66■□□□□ 0.58
PTK7-216ENST00000489707 MCTP1Q6DN14 999 aa18.66■□□□□ 0.58
PTK7-216ENST00000489707 LMBR1LQ6UX01 489 aa18.66■□□□□ 0.58
PTK7-216ENST00000489707 BOLA2Q9H3K6 86 aa18.66■□□□□ 0.58
PTK7-216ENST00000489707 GPR108Q9NPR9 543 aa18.66■□□□□ 0.58
PTK7-216ENST00000489707 LIMCH1Q9UPQ0 1083 aa18.66■□□□□ 0.58
PTK7-216ENST00000489707 TFCP2Q12800 502 aa18.65■□□□□ 0.58
PTK7-216ENST00000489707 TTLL7Q6ZT98 887 aa18.65■□□□□ 0.58
PTK7-216ENST00000489707 BTG4Q9NY30 223 aa18.65■□□□□ 0.58
PTK7-216ENST00000489707 TLR7Q9NYK1 1049 aaKnown RBP18.65■□□□□ 0.58
PTK7-216ENST00000489707 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.65■□□□□ 0.58
PTK7-216ENST00000489707 AHDC1Q5TGY3 1603 aaPredicted RBP18.65■□□□□ 0.58
PTK7-216ENST00000489707 STARD3NLO95772 234 aa18.64■□□□□ 0.58
PTK7-216ENST00000489707 TTC14Q96N46 770 aa18.64■□□□□ 0.58
PTK7-216ENST00000489707 CYP46A1Q9Y6A2 500 aa18.64■□□□□ 0.58
PTK7-216ENST00000489707 CASTP20810 708 aaKnown RBP18.64■□□□□ 0.57
PTK7-216ENST00000489707 PSMA5P28066 241 aa18.64■□□□□ 0.57
PTK7-216ENST00000489707 FOXO4P98177 505 aa18.64■□□□□ 0.57
PTK7-216ENST00000489707 NMIQ13287 307 aaPredicted RBP18.64■□□□□ 0.57
PTK7-216ENST00000489707 VPS53Q5VIR6 699 aa18.64■□□□□ 0.57
PTK7-216ENST00000489707 KIF6Q6ZMV9 814 aa18.64■□□□□ 0.57
PTK7-216ENST00000489707 MAP4K1Q92918 833 aa18.64■□□□□ 0.57
PTK7-216ENST00000489707 ZSCAN31Q96LW9 406 aaPredicted RBP18.64■□□□□ 0.57
PTK7-216ENST00000489707 CHMP3Q9Y3E7 222 aa18.64■□□□□ 0.57
PTK7-216ENST00000489707 WDR33Q9C0J8 1336 aaKnown RBP18.64■□□□□ 0.57
PTK7-216ENST00000489707 WNK3Q9BYP7 1800 aa18.63■□□□□ 0.57
PTK7-216ENST00000489707 ROBO1Q9Y6N7 1651 aa18.63■□□□□ 0.57
PTK7-216ENST00000489707 BRD1O95696 1058 aa18.63■□□□□ 0.57
PTK7-216ENST00000489707 IL15P40933 162 aaPredicted RBP18.63■□□□□ 0.57
PTK7-216ENST00000489707 NECTIN1Q15223 517 aa18.63■□□□□ 0.57
PTK7-216ENST00000489707 ZBTB3Q9H5J0 574 aa18.63■□□□□ 0.57
PTK7-216ENST00000489707 DBNLQ9UJU6 430 aaKnown RBP18.63■□□□□ 0.57
PTK7-216ENST00000489707 TRIM28Q13263 835 aaKnown RBP18.62■□□□□ 0.57
PTK7-216ENST00000489707 PKP1Q13835 747 aa18.62■□□□□ 0.57
PTK7-216ENST00000489707 PRPF40BQ6NWY9 871 aaKnown RBP18.62■□□□□ 0.57
PTK7-216ENST00000489707 NOL8Q76FK4 1167 aaKnown RBP18.62■□□□□ 0.57
PTK7-216ENST00000489707 RASEFQ8IZ41 740 aa18.62■□□□□ 0.57
PTK7-216ENST00000489707 JARID2Q92833 1246 aaPredicted RBP18.62■□□□□ 0.57
PTK7-216ENST00000489707 SH2B1Q9NRF2 756 aaPredicted RBP18.62■□□□□ 0.57
PTK7-216ENST00000489707 HMG20BQ9P0W2 317 aa18.62■□□□□ 0.57
PTK7-216ENST00000489707 FBXO3Q9UK99 471 aa18.62■□□□□ 0.57
PTK7-216ENST00000489707 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.62■□□□□ 0.57
PTK7-216ENST00000489707 SPEF2Q9C093 1822 aa18.62■□□□□ 0.57
PTK7-216ENST00000489707 DISP2A7MBM2 1401 aa18.62■□□□□ 0.57
PTK7-216ENST00000489707 CIAO1O76071 339 aa18.62■□□□□ 0.57
PTK7-216ENST00000489707 PTH1RQ03431 593 aa18.62■□□□□ 0.57
PTK7-216ENST00000489707 ZSWIM6Q9HCJ5 1215 aa18.62■□□□□ 0.57
PTK7-216ENST00000489707 ZDHHC9Q9Y397 364 aa18.62■□□□□ 0.57
PTK7-216ENST00000489707 RBM8AQ9Y5S9 174 aaKnown RBP18.62■□□□□ 0.57
PTK7-216ENST00000489707 MED23Q9ULK4 1368 aa18.62■□□□□ 0.57
PTK7-216ENST00000489707 AK2P54819 239 aa18.61■□□□□ 0.57
PTK7-216ENST00000489707 TCIRG1Q13488 830 aa18.61■□□□□ 0.57
PTK7-216ENST00000489707 JAKMIP1Q96N16 626 aaKnown RBP18.61■□□□□ 0.57
PTK7-216ENST00000489707 PDIA4P13667 645 aaKnown RBP18.61■□□□□ 0.57
PTK7-216ENST00000489707 RUFY3Q7L099 469 aa18.61■□□□□ 0.57
PTK7-216ENST00000489707 FAM227BQ96M60 508 aa18.61■□□□□ 0.57
PTK7-216ENST00000489707 HAUS7Q99871 368 aa18.61■□□□□ 0.57
PTK7-216ENST00000489707 ISCA1Q9BUE6 129 aa18.61■□□□□ 0.57
PTK7-216ENST00000489707 PDRG1Q9NUG6 133 aa18.61■□□□□ 0.57
PTK7-216ENST00000489707 LMBRD1Q9NUN5 540 aa18.61■□□□□ 0.57
PTK7-216ENST00000489707 ANKRD1Q15327 319 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms