RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 C3orf67Q6ZVT6 689 aa10.54□□□□□ -0.72
SF1-218ENST00000489544 C10orf71Q711Q0 1435 aa10.54□□□□□ -0.72
SF1-218ENST00000489544 CLUAP1Q96AJ1 413 aa10.54□□□□□ -0.72
SF1-218ENST00000489544 FAM89AQ96GI7 184 aa10.54□□□□□ -0.72
SF1-218ENST00000489544 SYT17Q9BSW7 474 aa10.54□□□□□ -0.72
SF1-218ENST00000489544 UTP14AQ9BVJ6 771 aaKnown RBP10.54□□□□□ -0.72
SF1-218ENST00000489544 TRMT112Q9UI30 125 aaKnown RBP10.54□□□□□ -0.72
SF1-218ENST00000489544 PTPRCP08575 1304 aa10.54□□□□□ -0.72
SF1-218ENST00000489544 A0A0G2JLW4 131 aa10.53□□□□□ -0.72
SF1-218ENST00000489544 HCLS1P14317 486 aaPredicted RBP10.53□□□□□ -0.72
SF1-218ENST00000489544 TRIM27P14373 513 aa10.53□□□□□ -0.72
SF1-218ENST00000489544 GTF2E1P29083 439 aaPredicted RBP10.53□□□□□ -0.72
SF1-218ENST00000489544 NEXNQ0ZGT2 675 aa10.53□□□□□ -0.72
SF1-218ENST00000489544 TRIM28Q13263 835 aaKnown RBP10.53□□□□□ -0.72
SF1-218ENST00000489544 PARP10Q53GL7 1025 aa10.53□□□□□ -0.72
SF1-218ENST00000489544 TPTE2Q6XPS3 522 aa10.53□□□□□ -0.72
SF1-218ENST00000489544 PPP1R42Q7Z4L9 355 aa10.53□□□□□ -0.72
SF1-218ENST00000489544 CWC25Q9NXE8 425 aaPredicted RBP10.53□□□□□ -0.72
SF1-218ENST00000489544 ANKRD36CQ5JPF3 1778 aa10.52□□□□□ -0.72
SF1-218ENST00000489544 DPEP1P16444 411 aa10.52□□□□□ -0.73
SF1-218ENST00000489544 ST5P78524 1137 aa10.52□□□□□ -0.73
SF1-218ENST00000489544 CCDC191Q8NCU4 936 aa10.52□□□□□ -0.73
SF1-218ENST00000489544 LINS1Q8NG48 757 aa10.52□□□□□ -0.73
SF1-218ENST00000489544 NYXQ9GZU5 481 aa10.52□□□□□ -0.73
SF1-218ENST00000489544 CD2APQ9Y5K6 639 aa10.52□□□□□ -0.73
SF1-218ENST00000489544 NRXN2Q9P2S2 1712 aa10.52□□□□□ -0.73
SF1-218ENST00000489544 KIF16BQ96L93 1317 aa10.52□□□□□ -0.73
SF1-218ENST00000489544 CACNA1FO60840 1977 aa10.52□□□□□ -0.73
SF1-218ENST00000489544 RLBP1P12271 317 aa10.51□□□□□ -0.73
SF1-218ENST00000489544 GCKRQ14397 625 aa10.51□□□□□ -0.73
SF1-218ENST00000489544 ZKSCAN2Q63HK3 967 aa10.51□□□□□ -0.73
SF1-218ENST00000489544 ATF7IPQ6VMQ6 1270 aa10.51□□□□□ -0.73
SF1-218ENST00000489544 UBE3BQ7Z3V4 1068 aa10.51□□□□□ -0.73
SF1-218ENST00000489544 BRIP1Q9BX63 1249 aa10.51□□□□□ -0.73
SF1-218ENST00000489544 API5Q9BZZ5 524 aaKnown RBP10.51□□□□□ -0.73
SF1-218ENST00000489544 SRCIN1Q9C0H9 1055 aa10.51□□□□□ -0.73
SF1-218ENST00000489544 SH3TC1Q8TE82 1336 aa10.51□□□□□ -0.73
SF1-218ENST00000489544 PXDNLA1KZ92 1463 aa10.5□□□□□ -0.73
SF1-218ENST00000489544 IRS4O14654 1257 aaPredicted RBP10.5□□□□□ -0.73
SF1-218ENST00000489544 IPO8O15397 1037 aaKnown RBP10.5□□□□□ -0.73
SF1-218ENST00000489544 PCCAP05165 728 aaPredicted RBP10.5□□□□□ -0.73
SF1-218ENST00000489544 KCNA3P22001 575 aa10.5□□□□□ -0.73
SF1-218ENST00000489544 C2CD5Q86YS7 1000 aa10.5□□□□□ -0.73
SF1-218ENST00000489544 TMEM57Q8N5G2 664 aa10.5□□□□□ -0.73
SF1-218ENST00000489544 ZBTB38Q8NAP3 1195 aaPredicted RBP10.5□□□□□ -0.73
SF1-218ENST00000489544 PANK1Q8TE04 598 aa10.5□□□□□ -0.73
SF1-218ENST00000489544 ARHGAP45Q92619 1136 aa10.5□□□□□ -0.73
SF1-218ENST00000489544 CCDC85AQ96PX6 553 aaPredicted RBP10.5□□□□□ -0.73
SF1-218ENST00000489544 ABCC4O15439 1325 aa10.5□□□□□ -0.73
SF1-218ENST00000489544 TNRC6CQ9HCJ0 1690 aaKnown RBP10.5□□□□□ -0.73
SF1-218ENST00000489544 IBTKQ9P2D0 1353 aaPredicted RBP10.5□□□□□ -0.73
SF1-218ENST00000489544 ANKRD31Q8N7Z5 1873 aa10.49□□□□□ -0.73
SF1-218ENST00000489544 H7C1W4 665 aa10.49□□□□□ -0.73
SF1-218ENST00000489544 CASP7P55210 303 aa10.49□□□□□ -0.73
SF1-218ENST00000489544 SLC10A5Q5PT55 438 aa10.49□□□□□ -0.73
SF1-218ENST00000489544 C20orf194Q5TEA3 1177 aa10.49□□□□□ -0.73
SF1-218ENST00000489544 SLC51AQ86UW1 340 aa10.49□□□□□ -0.73
SF1-218ENST00000489544 KIAA1551Q9HCM1 1747 aa10.48□□□□□ -0.73
SF1-218ENST00000489544 N4BP2Q86UW6 1770 aaPredicted RBP10.48□□□□□ -0.73
SF1-218ENST00000489544 GRM8O00222 908 aa10.48□□□□□ -0.73
SF1-218ENST00000489544 ALDH1L1O75891 902 aa10.48□□□□□ -0.73
SF1-218ENST00000489544 NBPF7P0C2Y1 421 aaPredicted RBP10.48□□□□□ -0.73
SF1-218ENST00000489544 PDE6BP35913 854 aa10.48□□□□□ -0.73
SF1-218ENST00000489544 TGFB2P61812 414 aa10.48□□□□□ -0.73
SF1-218ENST00000489544 EPHA10Q5JZY3 1008 aa10.48□□□□□ -0.73
SF1-218ENST00000489544 PELP1Q8IZL8 1130 aaKnown RBP10.48□□□□□ -0.73
SF1-218ENST00000489544 ZNF622Q969S3 477 aaKnown RBP eCLIP10.48□□□□□ -0.732e-7■■□□□ 12.7
SF1-218ENST00000489544 SUCLG2Q96I99 432 aa10.48□□□□□ -0.73
SF1-218ENST00000489544 USP44Q9H0E7 712 aa10.48□□□□□ -0.73
SF1-218ENST00000489544 C9orf78Q9NZ63 289 aaPredicted RBP10.48□□□□□ -0.73
SF1-218ENST00000489544 KIF13BQ9NQT8 1826 aa10.47□□□□□ -0.73
SF1-218ENST00000489544 KLRG2A4D1S0 409 aaPredicted RBP10.47□□□□□ -0.73
SF1-218ENST00000489544 H0YIN7 160 aa10.47□□□□□ -0.73
SF1-218ENST00000489544 SRGNP10124 158 aa10.47□□□□□ -0.73
SF1-218ENST00000489544 CCT4P50991 539 aaKnown RBP10.47□□□□□ -0.73
SF1-218ENST00000489544 INTS3Q68E01 1043 aaKnown RBP10.47□□□□□ -0.73
SF1-218ENST00000489544 FTSJ3Q8IY81 847 aaKnown RBP10.47□□□□□ -0.73
SF1-218ENST00000489544 DZIP1LQ8IYY4 767 aaKnown RBP10.47□□□□□ -0.73
SF1-218ENST00000489544 NLRP3Q96P20 1036 aa10.47□□□□□ -0.73
SF1-218ENST00000489544 MEIS3Q99687 375 aa10.47□□□□□ -0.73
SF1-218ENST00000489544 COL11A2P13942 1736 aaPredicted RBP10.47□□□□□ -0.73
SF1-218ENST00000489544 DCAF8L1A6NGE4 600 aa10.46□□□□□ -0.73
SF1-218ENST00000489544 YBX3P16989 372 aaKnown RBP eCLIP10.46□□□□□ -0.73
SF1-218ENST00000489544 YY1P25490 414 aa10.46□□□□□ -0.73
SF1-218ENST00000489544 CRY2Q49AN0 593 aa10.46□□□□□ -0.73
SF1-218ENST00000489544 KAZALD1Q96I82 304 aa10.46□□□□□ -0.73
SF1-218ENST00000489544 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.73
SF1-218ENST00000489544 BCS1LQ9Y276 419 aa10.46□□□□□ -0.73
SF1-218ENST00000489544 RNF123Q5XPI4 1314 aa10.46□□□□□ -0.73
SF1-218ENST00000489544 CDHR2Q9BYE9 1310 aa10.46□□□□□ -0.73
SF1-218ENST00000489544 DDX60Q8IY21 1712 aaKnown RBP10.46□□□□□ -0.74
SF1-218ENST00000489544 COL4A1P02462 1669 aa10.45□□□□□ -0.74
SF1-218ENST00000489544 RIC1Q4ADV7 1423 aa10.45□□□□□ -0.74
SF1-218ENST00000489544 UTYO14607 1347 aa10.45□□□□□ -0.74
SF1-218ENST00000489544 PDE8AO60658 829 aa10.45□□□□□ -0.74
SF1-218ENST00000489544 NPR1P16066 1061 aa10.45□□□□□ -0.74
SF1-218ENST00000489544 RRP1P56182 461 aaKnown RBP10.45□□□□□ -0.74
SF1-218ENST00000489544 CTSWP56202 376 aa10.45□□□□□ -0.74
SF1-218ENST00000489544 FOXO4P98177 505 aa10.45□□□□□ -0.74
SF1-218ENST00000489544 OLFM4Q6UX06 510 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms