RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 ZNF34Q8IZ26 560 aa15.54■□□□□ 0.08
ACTN4-206ENST00000489451 ZBTB3Q9H5J0 574 aa15.54■□□□□ 0.08
ACTN4-206ENST00000489451 WBP1LQ9NX94 342 aa15.54■□□□□ 0.08
ACTN4-206ENST00000489451 LAMB2P55268 1798 aa15.54■□□□□ 0.08
ACTN4-206ENST00000489451 ANKRD36CQ5JPF3 1778 aa15.54■□□□□ 0.08
ACTN4-206ENST00000489451 LTBP1Q14766 1721 aa15.54■□□□□ 0.08
ACTN4-206ENST00000489451 NTSR2O95665 410 aa15.53■□□□□ 0.08
ACTN4-206ENST00000489451 NEFMP07197 916 aa15.53■□□□□ 0.08
ACTN4-206ENST00000489451 ERBB4Q15303 1308 aa15.52■□□□□ 0.08
ACTN4-206ENST00000489451 MAPK8IP3Q9UPT6 1336 aa15.52■□□□□ 0.08
ACTN4-206ENST00000489451 ANXA1P04083 346 aa15.52■□□□□ 0.08
ACTN4-206ENST00000489451 VEGFBP49765 207 aa15.52■□□□□ 0.08
ACTN4-206ENST00000489451 CHADLQ6NUI6 762 aa15.52■□□□□ 0.08
ACTN4-206ENST00000489451 TAF1DQ9H5J8 278 aaPredicted RBP15.52■□□□□ 0.08
ACTN4-206ENST00000489451 TSPYL4Q9UJ04 414 aa15.52■□□□□ 0.08
ACTN4-206ENST00000489451 TNRC18O15417 2968 aaPredicted RBP15.52■□□□□ 0.07
ACTN4-206ENST00000489451 PASKQ96RG2 1323 aa15.51■□□□□ 0.07
ACTN4-206ENST00000489451 FZD9O00144 591 aa15.51■□□□□ 0.07
ACTN4-206ENST00000489451 HOXA10P31260 410 aaPredicted RBP15.51■□□□□ 0.07
ACTN4-206ENST00000489451 IARSP41252 1262 aaKnown RBP15.51■□□□□ 0.07
ACTN4-206ENST00000489451 TMPOP42166 694 aaKnown RBP15.51■□□□□ 0.07
ACTN4-206ENST00000489451 RIPK4P57078 832 aa15.51■□□□□ 0.07
ACTN4-206ENST00000489451 GIGYF2Q6Y7W6 1299 aaKnown RBP15.51■□□□□ 0.07
ACTN4-206ENST00000489451 KIF6Q6ZMV9 814 aa15.51■□□□□ 0.07
ACTN4-206ENST00000489451 SYNE4Q8N205 404 aa15.51■□□□□ 0.07
ACTN4-206ENST00000489451 NYXQ9GZU5 481 aa15.51■□□□□ 0.07
ACTN4-206ENST00000489451 ALDH1B1P30837 517 aa15.5■□□□□ 0.07
ACTN4-206ENST00000489451 RALBP1Q15311 655 aa15.5■□□□□ 0.07
ACTN4-206ENST00000489451 KRT24Q2M2I5 525 aa15.5■□□□□ 0.07
ACTN4-206ENST00000489451 RTKN2Q8IZC4 609 aa15.5■□□□□ 0.07
ACTN4-206ENST00000489451 PDE4DIPQ5VU43 2346 aa15.49■□□□□ 0.07
ACTN4-206ENST00000489451 GTF2E1P29083 439 aaPredicted RBP15.49■□□□□ 0.07
ACTN4-206ENST00000489451 PSMD1Q99460 953 aa15.49■□□□□ 0.07
ACTN4-206ENST00000489451 RNF123Q5XPI4 1314 aa15.48■□□□□ 0.07
ACTN4-206ENST00000489451 EIF2S2P20042 333 aaKnown RBP15.48■□□□□ 0.07
ACTN4-206ENST00000489451 LDHDQ86WU2 507 aa15.48■□□□□ 0.07
ACTN4-206ENST00000489451 CCDC146Q8IYE0 955 aa15.48■□□□□ 0.07
ACTN4-206ENST00000489451 PNNQ9H307 717 aaKnown RBP15.48■□□□□ 0.07
ACTN4-206ENST00000489451 TRIM35Q9UPQ4 493 aa15.48■□□□□ 0.07
ACTN4-206ENST00000489451 TAF1P21675 1872 aa15.48■□□□□ 0.07
ACTN4-206ENST00000489451 IQCA1LA6NCM1 817 aa15.47■□□□□ 0.07
ACTN4-206ENST00000489451 ITGBL1O95965 494 aaPredicted RBP15.47■□□□□ 0.07
ACTN4-206ENST00000489451 BABAM1Q9NWV8 329 aa15.47■□□□□ 0.07
ACTN4-206ENST00000489451 MYBBP1AQ9BQG0 1328 aaKnown RBP15.46■□□□□ 0.07
ACTN4-206ENST00000489451 DDX60Q8IY21 1712 aaKnown RBP15.46■□□□□ 0.07
ACTN4-206ENST00000489451 MAP2K1Q02750 393 aaPredicted RBP15.46■□□□□ 0.07
ACTN4-206ENST00000489451 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
ACTN4-206ENST00000489451 NECTIN2Q92692 538 aa15.46■□□□□ 0.07
ACTN4-206ENST00000489451 RPGRQ92834 1020 aaKnown RBP15.46■□□□□ 0.07
ACTN4-206ENST00000489451 CRAMP1Q96RY5 1269 aa15.46■□□□□ 0.07
ACTN4-206ENST00000489451 COL4A1P02462 1669 aa15.46■□□□□ 0.07
ACTN4-206ENST00000489451 CHL1O00533 1208 aa15.45■□□□□ 0.06
ACTN4-206ENST00000489451 PPEF1O14829 653 aaPredicted RBP15.45■□□□□ 0.06
ACTN4-206ENST00000489451 EPHX2P34913 555 aa15.45■□□□□ 0.06
ACTN4-206ENST00000489451 SLC10A5Q5PT55 438 aa15.45■□□□□ 0.06
ACTN4-206ENST00000489451 HACL1Q9UJ83 578 aa15.45■□□□□ 0.06
ACTN4-206ENST00000489451 ABCC4O15439 1325 aa15.44■□□□□ 0.06
ACTN4-206ENST00000489451 TMEM88BA6NKF7 163 aa15.44■□□□□ 0.06
ACTN4-206ENST00000489451 PARP10Q53GL7 1025 aa15.44■□□□□ 0.06
ACTN4-206ENST00000489451 EAPPQ56P03 285 aaPredicted RBP15.44■□□□□ 0.06
ACTN4-206ENST00000489451 CC2D2BQ6DHV5 1058 aa15.44■□□□□ 0.06
ACTN4-206ENST00000489451 COPS6Q7L5N1 327 aa15.44■□□□□ 0.06
ACTN4-206ENST00000489451 GPC2Q8N158 579 aa15.44■□□□□ 0.06
ACTN4-206ENST00000489451 XAGE3Q8WTP9 111 aa15.44■□□□□ 0.06
ACTN4-206ENST00000489451 DUOX1Q9NRD9 1551 aa15.44■□□□□ 0.06
ACTN4-206ENST00000489451 TCERG1O14776 1098 aaKnown RBP15.43■□□□□ 0.06
ACTN4-206ENST00000489451 SCNN1DP51172 638 aa15.43■□□□□ 0.06
ACTN4-206ENST00000489451 NEUROD2Q15784 382 aa15.43■□□□□ 0.06
ACTN4-206ENST00000489451 PPP1R42Q7Z4L9 355 aa15.43■□□□□ 0.06
ACTN4-206ENST00000489451 NLRP10Q86W26 655 aa15.43■□□□□ 0.06
ACTN4-206ENST00000489451 RBM17Q96I25 401 aaKnown RBP15.43■□□□□ 0.06
ACTN4-206ENST00000489451 BEGAINQ9BUH8 593 aa15.43■□□□□ 0.06
ACTN4-206ENST00000489451 UTP14AQ9BVJ6 771 aaKnown RBP15.43■□□□□ 0.06
ACTN4-206ENST00000489451 LRRC37AA6NMS7 1700 aa15.43■□□□□ 0.06
ACTN4-206ENST00000489451 LMOD3Q0VAK6 560 aa15.42■□□□□ 0.06
ACTN4-206ENST00000489451 AIMP1Q12904 312 aaKnown RBP15.42■□□□□ 0.06
ACTN4-206ENST00000489451 MAP1SQ66K74 1059 aaPredicted RBP15.42■□□□□ 0.06
ACTN4-206ENST00000489451 ZNF428Q96B54 188 aa15.42■□□□□ 0.06
ACTN4-206ENST00000489451 ADAMTS8Q9UP79 889 aa15.42■□□□□ 0.06
ACTN4-206ENST00000489451 THSD7BQ9C0I4 1608 aa15.42■□□□□ 0.06
ACTN4-206ENST00000489451 HCLS1P14317 486 aaPredicted RBP15.41■□□□□ 0.06
ACTN4-206ENST00000489451 RUNDC1Q96C34 613 aa15.41■□□□□ 0.06
ACTN4-206ENST00000489451 NLRP3Q96P20 1036 aa15.41■□□□□ 0.06
ACTN4-206ENST00000489451 DDX21Q9NR30 783 aaKnown RBP eCLIP15.41■□□□□ 0.06
ACTN4-206ENST00000489451 CHPF2Q9P2E5 772 aa15.41■□□□□ 0.06
ACTN4-206ENST00000489451 ATP6V0A2Q9Y487 856 aa15.41■□□□□ 0.06
ACTN4-206ENST00000489451 EPS15P42566 896 aa15.4■□□□□ 0.06
ACTN4-206ENST00000489451 FMR1Q06787 632 aaKnown RBP eCLIP15.4■□□□□ 0.067e-8■■■□□ 14.8
ACTN4-206ENST00000489451 TCIRG1Q13488 830 aa15.4■□□□□ 0.06
ACTN4-206ENST00000489451 AOC3Q16853 763 aa15.4■□□□□ 0.06
ACTN4-206ENST00000489451 PRPF38BQ5VTL8 546 aaKnown RBP15.4■□□□□ 0.06
ACTN4-206ENST00000489451 LARGE2Q8N3Y3 721 aa15.4■□□□□ 0.06
ACTN4-206ENST00000489451 JDP2Q8WYK2 163 aa15.4■□□□□ 0.06
ACTN4-206ENST00000489451 RTFDC1Q9BY42 306 aaPredicted RBP15.4■□□□□ 0.06
ACTN4-206ENST00000489451 GJA3Q9Y6H8 435 aa15.4■□□□□ 0.06
ACTN4-206ENST00000489451 WDR33Q9C0J8 1336 aaKnown RBP15.4■□□□□ 0.06
ACTN4-206ENST00000489451 DEFB115Q30KQ5 88 aa15.39■□□□□ 0.05
ACTN4-206ENST00000489451 CNTROBQ8N137 903 aa15.39■□□□□ 0.05
ACTN4-206ENST00000489451 MCOLN1Q9GZU1 580 aa15.39■□□□□ 0.05
ACTN4-206ENST00000489451 RASSF10A6NK89 507 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms