RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 SYNE4Q8N205 404 aa12.34□□□□□ -0.43
SNX17-207ENST00000489402 PSMD1Q99460 953 aa12.34□□□□□ -0.43
SNX17-207ENST00000489402 ZBTB3Q9H5J0 574 aa12.34□□□□□ -0.43
SNX17-207ENST00000489402 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
SNX17-207ENST00000489402 RIC1Q4ADV7 1423 aa12.34□□□□□ -0.43
SNX17-207ENST00000489402 ERBB4Q15303 1308 aa12.34□□□□□ -0.43
SNX17-207ENST00000489402 FZD9O00144 591 aa12.33□□□□□ -0.44
SNX17-207ENST00000489402 GRIPAP1Q4V328 841 aa12.33□□□□□ -0.44
SNX17-207ENST00000489402 PNMA8AQ86V59 439 aaPredicted RBP12.33□□□□□ -0.44
SNX17-207ENST00000489402 SNED1Q8TER0 1413 aa12.33□□□□□ -0.44
SNX17-207ENST00000489402 UBN2Q6ZU65 1347 aa12.33□□□□□ -0.44
SNX17-207ENST00000489402 PASKQ96RG2 1323 aa12.33□□□□□ -0.44
SNX17-207ENST00000489402 CNTNAP1P78357 1384 aa12.32□□□□□ -0.44
SNX17-207ENST00000489402 CAPN15O75808 1086 aa12.32□□□□□ -0.44
SNX17-207ENST00000489402 ANXA1P04083 346 aa12.32□□□□□ -0.44
SNX17-207ENST00000489402 HOXA10P31260 410 aaPredicted RBP12.32□□□□□ -0.44
SNX17-207ENST00000489402 EIF6P56537 245 aaKnown RBP12.32□□□□□ -0.44
SNX17-207ENST00000489402 PROSER3Q2NL68 480 aa12.32□□□□□ -0.44
SNX17-207ENST00000489402 GIGYF2Q6Y7W6 1299 aaKnown RBP12.32□□□□□ -0.44
SNX17-207ENST00000489402 PPP1R42Q7Z4L9 355 aa12.32□□□□□ -0.44
SNX17-207ENST00000489402 GPC2Q8N158 579 aa12.32□□□□□ -0.44
SNX17-207ENST00000489402 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
SNX17-207ENST00000489402 RBM17Q96I25 401 aaKnown RBP12.32□□□□□ -0.44
SNX17-207ENST00000489402 TMX4Q9H1E5 349 aaPredicted RBP12.32□□□□□ -0.44
SNX17-207ENST00000489402 TSPYL4Q9UJ04 414 aa12.32□□□□□ -0.44
SNX17-207ENST00000489402 RNF123Q5XPI4 1314 aa12.32□□□□□ -0.44
SNX17-207ENST00000489402 ADAMTSL1Q8N6G6 1762 aa12.31□□□□□ -0.44
SNX17-207ENST00000489402 TMEM88BA6NKF7 163 aa12.31□□□□□ -0.44
SNX17-207ENST00000489402 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
SNX17-207ENST00000489402 PARP10Q53GL7 1025 aa12.31□□□□□ -0.44
SNX17-207ENST00000489402 SUSD4Q5VX71 490 aa12.31□□□□□ -0.44
SNX17-207ENST00000489402 LRP10Q7Z4F1 713 aa12.31□□□□□ -0.44
SNX17-207ENST00000489402 ZNF34Q8IZ26 560 aa12.31□□□□□ -0.44
SNX17-207ENST00000489402 CRAMP1Q96RY5 1269 aa12.31□□□□□ -0.44
SNX17-207ENST00000489402 PPEF1O14829 653 aaPredicted RBP12.3□□□□□ -0.44
SNX17-207ENST00000489402 NTSR2O95665 410 aa12.3□□□□□ -0.44
SNX17-207ENST00000489402 ITGBL1O95965 494 aaPredicted RBP12.3□□□□□ -0.44
SNX17-207ENST00000489402 LMOD3Q0VAK6 560 aa12.3□□□□□ -0.44
SNX17-207ENST00000489402 PDIA6Q15084 440 aa12.3□□□□□ -0.44
SNX17-207ENST00000489402 KRT24Q2M2I5 525 aa12.3□□□□□ -0.44
SNX17-207ENST00000489402 LARGE2Q8N3Y3 721 aa12.3□□□□□ -0.44
SNX17-207ENST00000489402 GJA3Q9Y6H8 435 aa12.3□□□□□ -0.44
SNX17-207ENST00000489402 LTBP1Q14766 1721 aa12.29□□□□□ -0.44
SNX17-207ENST00000489402 ANKRD36CQ5JPF3 1778 aa12.29□□□□□ -0.44
SNX17-207ENST00000489402 TCERG1O14776 1098 aaKnown RBP12.29□□□□□ -0.44
SNX17-207ENST00000489402 EIF2S2P20042 333 aaKnown RBP12.29□□□□□ -0.44
SNX17-207ENST00000489402 RIPK4P57078 832 aa12.29□□□□□ -0.44
SNX17-207ENST00000489402 FMR1Q06787 632 aaKnown RBP eCLIP12.29□□□□□ -0.44
SNX17-207ENST00000489402 NIM1KQ8IY84 436 aa12.29□□□□□ -0.44
SNX17-207ENST00000489402 AIDAQ96BJ3 306 aa12.29□□□□□ -0.44
SNX17-207ENST00000489402 NLRP3Q96P20 1036 aa12.29□□□□□ -0.44
SNX17-207ENST00000489402 BABAM1Q9NWV8 329 aa12.29□□□□□ -0.44
SNX17-207ENST00000489402 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
SNX17-207ENST00000489402 RALBP1Q15311 655 aa12.28□□□□□ -0.44
SNX17-207ENST00000489402 MAP1SQ66K74 1059 aaPredicted RBP12.28□□□□□ -0.44
SNX17-207ENST00000489402 CNTROBQ8N137 903 aa12.28□□□□□ -0.44
SNX17-207ENST00000489402 NECTIN2Q92692 538 aa12.28□□□□□ -0.44
SNX17-207ENST00000489402 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
SNX17-207ENST00000489402 VEGFBP49765 207 aa12.27□□□□□ -0.45
SNX17-207ENST00000489402 HSP90AB3PQ58FF7 597 aa12.27□□□□□ -0.45
SNX17-207ENST00000489402 CCDC146Q8IYE0 955 aa12.27□□□□□ -0.45
SNX17-207ENST00000489402 TAF1P21675 1872 aa12.27□□□□□ -0.45
SNX17-207ENST00000489402 COL4A1P02462 1669 aa12.26□□□□□ -0.45
SNX17-207ENST00000489402 LAMB2P55268 1798 aa12.26□□□□□ -0.45
SNX17-207ENST00000489402 FOXN1O15353 648 aa12.26□□□□□ -0.45
SNX17-207ENST00000489402 PPIP5K2O43314 1243 aa12.26□□□□□ -0.45
SNX17-207ENST00000489402 TMPOP42166 694 aaKnown RBP12.26□□□□□ -0.45
SNX17-207ENST00000489402 SUPT20HQ8NEM7 779 aa12.26□□□□□ -0.45
SNX17-207ENST00000489402 VPS33BQ9H267 617 aa12.26□□□□□ -0.45
SNX17-207ENST00000489402 ABT1Q9ULW3 272 aaKnown RBP12.26□□□□□ -0.45
SNX17-207ENST00000489402 ATP6V0A2Q9Y487 856 aa12.26□□□□□ -0.45
SNX17-207ENST00000489402 RASSF10A6NK89 507 aa12.25□□□□□ -0.45
SNX17-207ENST00000489402 CTCFP49711 727 aaPredicted RBP12.25□□□□□ -0.45
SNX17-207ENST00000489402 SCNN1DP51172 638 aa12.25□□□□□ -0.45
SNX17-207ENST00000489402 AIMP1Q12904 312 aaKnown RBP12.25□□□□□ -0.45
SNX17-207ENST00000489402 AOC3Q16853 763 aa12.25□□□□□ -0.45
SNX17-207ENST00000489402 DEFB115Q30KQ5 88 aa12.25□□□□□ -0.45
SNX17-207ENST00000489402 NCBP3Q53F19 620 aaKnown RBP12.25□□□□□ -0.45
SNX17-207ENST00000489402 SLC10A5Q5PT55 438 aa12.25□□□□□ -0.45
SNX17-207ENST00000489402 ABCC4O15439 1325 aa12.24□□□□□ -0.45
SNX17-207ENST00000489402 EPS15P42566 896 aa12.24□□□□□ -0.45
SNX17-207ENST00000489402 NEUROD2Q15784 382 aa12.24□□□□□ -0.45
SNX17-207ENST00000489402 USP50Q70EL3 339 aaPredicted RBP12.24□□□□□ -0.45
SNX17-207ENST00000489402 COPS6Q7L5N1 327 aa12.24□□□□□ -0.45
SNX17-207ENST00000489402 XAGE3Q8WTP9 111 aa12.24□□□□□ -0.45
SNX17-207ENST00000489402 PRDM10Q9NQV6 1147 aa12.24□□□□□ -0.45
SNX17-207ENST00000489402 DDX21Q9NR30 783 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNX17-207ENST00000489402 TRPM7Q96QT4 1865 aa12.23□□□□□ -0.45
SNX17-207ENST00000489402 MYBBP1AQ9BQG0 1328 aaKnown RBP12.23□□□□□ -0.45
SNX17-207ENST00000489402 WDR33Q9C0J8 1336 aaKnown RBP12.23□□□□□ -0.45
SNX17-207ENST00000489402 BBOX1O75936 387 aa12.23□□□□□ -0.45
SNX17-207ENST00000489402 DDX10Q13206 875 aaKnown RBP12.23□□□□□ -0.45
SNX17-207ENST00000489402 DPP8Q6V1X1 898 aaPredicted RBP12.23□□□□□ -0.45
SNX17-207ENST00000489402 DDX46Q7L014 1031 aaKnown RBP12.23□□□□□ -0.45
SNX17-207ENST00000489402 NLRP10Q86W26 655 aa12.23□□□□□ -0.45
SNX17-207ENST00000489402 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
SNX17-207ENST00000489402 TRMT112Q9UI30 125 aaKnown RBP12.23□□□□□ -0.45
SNX17-207ENST00000489402 ZNRF3Q9ULT6 936 aa12.23□□□□□ -0.45
SNX17-207ENST00000489402 TRIM35Q9UPQ4 493 aa12.23□□□□□ -0.45
SNX17-207ENST00000489402 SH3TC1Q8TE82 1336 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms