RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.37
SSBP1-212ENST00000489378 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.37
SSBP1-212ENST00000489378 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.37
SSBP1-212ENST00000489378 LTBP1Q14766 1721 aa12.71□□□□□ -0.37
SSBP1-212ENST00000489378 TNNT2P45379 298 aaPredicted RBP12.71□□□□□ -0.38
SSBP1-212ENST00000489378 CYP4F22Q6NT55 531 aa12.71□□□□□ -0.38
SSBP1-212ENST00000489378 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.38
SSBP1-212ENST00000489378 GPR101Q96P66 508 aaPredicted RBP12.71□□□□□ -0.38
SSBP1-212ENST00000489378 PDZRN3Q9UPQ7 1066 aa12.71□□□□□ -0.38
SSBP1-212ENST00000489378 RNF123Q5XPI4 1314 aa12.7□□□□□ -0.38
SSBP1-212ENST00000489378 CANXP27824 592 aaKnown RBP12.7□□□□□ -0.38
SSBP1-212ENST00000489378 SLC39A6Q13433 755 aa12.7□□□□□ -0.38
SSBP1-212ENST00000489378 CNKSR1Q969H4 720 aa12.7□□□□□ -0.38
SSBP1-212ENST00000489378 DDX21Q9NR30 783 aaKnown RBP eCLIP12.7□□□□□ -0.38
SSBP1-212ENST00000489378 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.7□□□□□ -0.38
SSBP1-212ENST00000489378 GOLGA2Q08379 1002 aa12.69□□□□□ -0.38
SSBP1-212ENST00000489378 STYK1Q6J9G0 422 aa12.69□□□□□ -0.38
SSBP1-212ENST00000489378 PNMA8AQ86V59 439 aaPredicted RBP12.69□□□□□ -0.38
SSBP1-212ENST00000489378 ARFGEF2Q9Y6D5 1785 aa12.69□□□□□ -0.38
SSBP1-212ENST00000489378 AOC2O75106 756 aa12.68□□□□□ -0.38
SSBP1-212ENST00000489378 SRGNP10124 158 aa12.68□□□□□ -0.38
SSBP1-212ENST00000489378 ECE1P42892 770 aa12.68□□□□□ -0.38
SSBP1-212ENST00000489378 SOGA3Q5TF21 947 aa12.68□□□□□ -0.38
SSBP1-212ENST00000489378 C7orf43Q8WVR3 580 aa12.68□□□□□ -0.38
SSBP1-212ENST00000489378 SLC52A2Q9HAB3 445 aa12.68□□□□□ -0.38
SSBP1-212ENST00000489378 ZNF277Q9NRM2 450 aaPredicted RBP12.68□□□□□ -0.38
SSBP1-212ENST00000489378 EIF5P55010 431 aaKnown RBP12.67□□□□□ -0.38
SSBP1-212ENST00000489378 LGR6Q9HBX8 967 aa12.67□□□□□ -0.38
SSBP1-212ENST00000489378 SCN7AQ01118 1682 aa12.66□□□□□ -0.38
SSBP1-212ENST00000489378 DGKZQ13574 1117 aa12.66□□□□□ -0.38
SSBP1-212ENST00000489378 CCDC93Q567U6 631 aa12.66□□□□□ -0.38
SSBP1-212ENST00000489378 CST9Q5W186 159 aa12.66□□□□□ -0.38
SSBP1-212ENST00000489378 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
SSBP1-212ENST00000489378 MASTLQ96GX5 879 aa12.66□□□□□ -0.38
SSBP1-212ENST00000489378 FKBP4Q02790 459 aaKnown RBP eCLIP12.65□□□□□ -0.38
SSBP1-212ENST00000489378 CDCA8Q53HL2 280 aa12.65□□□□□ -0.38
SSBP1-212ENST00000489378 CNBD1Q8NA66 436 aa12.65□□□□□ -0.38
SSBP1-212ENST00000489378 TRPM7Q96QT4 1865 aa12.65□□□□□ -0.38
SSBP1-212ENST00000489378 MRC1P22897 1456 aa12.65□□□□□ -0.39
SSBP1-212ENST00000489378 A0A087WZG4 1122 aa12.64□□□□□ -0.39
SSBP1-212ENST00000489378 FZD9O00144 591 aa12.64□□□□□ -0.39
SSBP1-212ENST00000489378 TRAF5O00463 557 aa12.64□□□□□ -0.39
SSBP1-212ENST00000489378 TBC1D2BQ9UPU7 963 aa12.64□□□□□ -0.39
SSBP1-212ENST00000489378 TLL2Q9Y6L7 1015 aa12.64□□□□□ -0.39
SSBP1-212ENST00000489378 MAP2K2P36507 400 aa12.63□□□□□ -0.39
SSBP1-212ENST00000489378 SOX10P56693 466 aa12.63□□□□□ -0.39
SSBP1-212ENST00000489378 SULT6B1Q6IMI4 303 aa12.63□□□□□ -0.39
SSBP1-212ENST00000489378 VSIG10Q8N0Z9 540 aa12.63□□□□□ -0.39
SSBP1-212ENST00000489378 NPHP1O15259 732 aa12.62□□□□□ -0.39
SSBP1-212ENST00000489378 AKAP4Q5JQC9 854 aa12.62□□□□□ -0.39
SSBP1-212ENST00000489378 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
SSBP1-212ENST00000489378 GPC2Q8N158 579 aa12.62□□□□□ -0.39
SSBP1-212ENST00000489378 SETDB2Q96T68 719 aa12.62□□□□□ -0.39
SSBP1-212ENST00000489378 ZNF330Q9Y3S2 320 aaPredicted RBP12.62□□□□□ -0.39
SSBP1-212ENST00000489378 UBR2Q8IWV8 1755 aa12.62□□□□□ -0.39
SSBP1-212ENST00000489378 RNMTO43148 476 aaKnown RBP12.62□□□□□ -0.39
SSBP1-212ENST00000489378 CA12O43570 354 aa12.62□□□□□ -0.39
SSBP1-212ENST00000489378 IARSP41252 1262 aaKnown RBP12.62□□□□□ -0.39
SSBP1-212ENST00000489378 ST5P78524 1137 aa12.62□□□□□ -0.39
SSBP1-212ENST00000489378 PRPF38BQ5VTL8 546 aaKnown RBP12.62□□□□□ -0.39
SSBP1-212ENST00000489378 STARD3NLO95772 234 aa12.61□□□□□ -0.39
SSBP1-212ENST00000489378 EPS15P42566 896 aa12.61□□□□□ -0.39
SSBP1-212ENST00000489378 GJA3Q9Y6H8 435 aa12.61□□□□□ -0.39
SSBP1-212ENST00000489378 COL4A5P29400 1685 aa12.6□□□□□ -0.39
SSBP1-212ENST00000489378 CAMTA2O94983 1202 aa12.6□□□□□ -0.39
SSBP1-212ENST00000489378 BRPF1P55201 1214 aaPredicted RBP12.6□□□□□ -0.39
SSBP1-212ENST00000489378 SAPCD2Q86UD0 394 aa12.6□□□□□ -0.39
SSBP1-212ENST00000489378 RTKN2Q8IZC4 609 aa12.6□□□□□ -0.39
SSBP1-212ENST00000489378 SYNE4Q8N205 404 aa12.6□□□□□ -0.39
SSBP1-212ENST00000489378 NPR1P16066 1061 aa12.59□□□□□ -0.39
SSBP1-212ENST00000489378 LMOD1P29536 600 aaPredicted RBP12.59□□□□□ -0.39
SSBP1-212ENST00000489378 SCNN1DP51172 638 aa12.59□□□□□ -0.39
SSBP1-212ENST00000489378 CIAPIN1Q6FI81 312 aa12.59□□□□□ -0.39
SSBP1-212ENST00000489378 SNPHO15079 494 aa12.58□□□□□ -0.4
SSBP1-212ENST00000489378 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
SSBP1-212ENST00000489378 ZIC5Q96T25 663 aa12.58□□□□□ -0.4
SSBP1-212ENST00000489378 BCORQ6W2J9 1755 aa12.57□□□□□ -0.4
SSBP1-212ENST00000489378 IL6STP40189 918 aaPredicted RBP12.57□□□□□ -0.4
SSBP1-212ENST00000489378 ZNF496Q96IT1 587 aaPredicted RBP12.57□□□□□ -0.4
SSBP1-212ENST00000489378 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
SSBP1-212ENST00000489378 SNED1Q8TER0 1413 aa12.57□□□□□ -0.4
SSBP1-212ENST00000489378 KLRG2A4D1S0 409 aaPredicted RBP12.56□□□□□ -0.4
SSBP1-212ENST00000489378 CELF2O95319 508 aaKnown RBP12.56□□□□□ -0.4
SSBP1-212ENST00000489378 A1BGP04217 495 aa12.56□□□□□ -0.4
SSBP1-212ENST00000489378 IL13P35225 146 aa12.56□□□□□ -0.4
SSBP1-212ENST00000489378 EIF6P56537 245 aaKnown RBP12.56□□□□□ -0.4
SSBP1-212ENST00000489378 USP50Q70EL3 339 aaPredicted RBP12.56□□□□□ -0.4
SSBP1-212ENST00000489378 NBPF5PQ86XG9 351 aaPredicted RBP12.56□□□□□ -0.4
SSBP1-212ENST00000489378 JDP2Q8WYK2 163 aa12.56□□□□□ -0.4
SSBP1-212ENST00000489378 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
SSBP1-212ENST00000489378 TTC5Q8N0Z6 440 aa12.55□□□□□ -0.4
SSBP1-212ENST00000489378 HEG1Q9ULI3 1381 aa12.54□□□□□ -0.4
SSBP1-212ENST00000489378 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
SSBP1-212ENST00000489378 HHIPL1Q96JK4 782 aa12.54□□□□□ -0.4
SSBP1-212ENST00000489378 PSMD1Q99460 953 aa12.54□□□□□ -0.4
SSBP1-212ENST00000489378 GLIS2Q9BZE0 524 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-212ENST00000489378 MTHFSDQ2M296 383 aaKnown RBP12.54□□□□□ -0.4
SSBP1-212ENST00000489378 PIP4K2AP48426 406 aaPredicted RBP12.53□□□□□ -0.4
SSBP1-212ENST00000489378 SLC51AQ86UW1 340 aa12.53□□□□□ -0.4
SSBP1-212ENST00000489378 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms