RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 VTI1AQ96AJ9 217 aa5.12□□□□□ -1.59
CALD1-221ENST00000489019 SAP130Q9H0E3 1048 aa5.12□□□□□ -1.59
CALD1-221ENST00000489019 AVENQ9NQS1 362 aaPredicted RBP5.12□□□□□ -1.59
CALD1-221ENST00000489019 PRR12Q9ULL5 1215 aa5.12□□□□□ -1.59
CALD1-221ENST00000489019 CNTNAP5Q8WYK1 1306 aa5.12□□□□□ -1.59
CALD1-221ENST00000489019 PPP1R15AO75807 674 aaPredicted RBP5.11□□□□□ -1.59
CALD1-221ENST00000489019 ADH6P28332 368 aa5.11□□□□□ -1.59
CALD1-221ENST00000489019 MARSP56192 900 aaKnown RBP5.11□□□□□ -1.59
CALD1-221ENST00000489019 SPEM2Q0P670 501 aa5.11□□□□□ -1.59
CALD1-221ENST00000489019 KCNMA1Q12791 1236 aa5.11□□□□□ -1.59
CALD1-221ENST00000489019 HIF1AQ16665 826 aa5.11□□□□□ -1.59
CALD1-221ENST00000489019 C11orf91Q3C1V1 193 aa5.11□□□□□ -1.59
CALD1-221ENST00000489019 FAM26DQ5JW98 314 aa5.11□□□□□ -1.59
CALD1-221ENST00000489019 MDFIQ99750 246 aa5.11□□□□□ -1.59
CALD1-221ENST00000489019 KCNH4Q9UQ05 1017 aa5.11□□□□□ -1.59
CALD1-221ENST00000489019 INPP5BP32019 993 aa5.1□□□□□ -1.59
CALD1-221ENST00000489019 SCNN1AP37088 669 aa5.1□□□□□ -1.59
CALD1-221ENST00000489019 IDH3AP50213 366 aa5.1□□□□□ -1.59
CALD1-221ENST00000489019 NAA30Q147X3 362 aaPredicted RBP5.1□□□□□ -1.59
CALD1-221ENST00000489019 COL26A1Q96A83 441 aa5.1□□□□□ -1.59
CALD1-221ENST00000489019 BTBD6Q96KE9 485 aa5.1□□□□□ -1.59
CALD1-221ENST00000489019 ARID3AQ99856 593 aa5.1□□□□□ -1.59
CALD1-221ENST00000489019 TNFRSF10BO14763 440 aa5.09□□□□□ -1.59
CALD1-221ENST00000489019 MICAL2O94851 1124 aa5.09□□□□□ -1.59
CALD1-221ENST00000489019 ATP2B4P23634 1241 aa5.09□□□□□ -1.59
CALD1-221ENST00000489019 IRS1P35568 1242 aa5.09□□□□□ -1.59
CALD1-221ENST00000489019 C16orf46Q6P387 395 aa5.09□□□□□ -1.59
CALD1-221ENST00000489019 ERICH6Q7L0X2 663 aa5.09□□□□□ -1.59
CALD1-221ENST00000489019 ETFBKMTQ8IXQ9 262 aa5.09□□□□□ -1.59
CALD1-221ENST00000489019 IFT43Q96FT9 208 aa5.09□□□□□ -1.59
CALD1-221ENST00000489019 SCARF2Q96GP6 870 aaPredicted RBP5.09□□□□□ -1.59
CALD1-221ENST00000489019 GSX2Q9BZM3 304 aa5.09□□□□□ -1.59
CALD1-221ENST00000489019 USP20Q9Y2K6 914 aa5.09□□□□□ -1.59
CALD1-221ENST00000489019 RNF225M0QZC1 329 aaPredicted RBP5.08□□□□□ -1.6
CALD1-221ENST00000489019 OPLAHO14841 1288 aa5.08□□□□□ -1.6
CALD1-221ENST00000489019 SIN3BO75182 1162 aa5.08□□□□□ -1.6
CALD1-221ENST00000489019 AMPD1P23109 780 aa5.08□□□□□ -1.6
CALD1-221ENST00000489019 DGKGP49619 791 aa5.08□□□□□ -1.6
CALD1-221ENST00000489019 RASSF7Q02833 373 aa5.08□□□□□ -1.6
CALD1-221ENST00000489019 LINC00114Q6XXX2 140 aa5.08□□□□□ -1.6
CALD1-221ENST00000489019 CHSY3Q70JA7 882 aa5.08□□□□□ -1.6
CALD1-221ENST00000489019 TREML1Q86YW5 311 aa5.08□□□□□ -1.6
CALD1-221ENST00000489019 TNFRSF25Q93038 417 aa5.08□□□□□ -1.6
CALD1-221ENST00000489019 BHMTQ93088 406 aa5.08□□□□□ -1.6
CALD1-221ENST00000489019 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.08□□□□□ -1.6
CALD1-221ENST00000489019 SEPT3Q9UH03 358 aa5.08□□□□□ -1.6
CALD1-221ENST00000489019 ELOA3CA0A087WX78 387 aaPredicted RBP5.07□□□□□ -1.6
CALD1-221ENST00000489019 ELOA3DA6NLF2 546 aaPredicted RBP5.07□□□□□ -1.6
CALD1-221ENST00000489019 ADARB2-AS1A8MUL3 147 aa5.07□□□□□ -1.6
CALD1-221ENST00000489019 PTCD1O75127 700 aaKnown RBP5.07□□□□□ -1.6
CALD1-221ENST00000489019 ARSDP51689 593 aa5.07□□□□□ -1.6
CALD1-221ENST00000489019 ELOA3BQ3SY89 546 aa5.07□□□□□ -1.6
CALD1-221ENST00000489019 PHLDB3Q6NSJ2 640 aa5.07□□□□□ -1.6
CALD1-221ENST00000489019 BEND7Q8N7W2 519 aaPredicted RBP5.07□□□□□ -1.6
CALD1-221ENST00000489019 ELOA3Q8NG57 546 aa5.07□□□□□ -1.6
CALD1-221ENST00000489019 RRAGCQ9HB90 399 aa5.07□□□□□ -1.6
CALD1-221ENST00000489019 SSFA2P28290 1259 aa5.06□□□□□ -1.6
CALD1-221ENST00000489019 ZFATQ9P243 1243 aa5.06□□□□□ -1.6
CALD1-221ENST00000489019 STARD13Q9Y3M8 1113 aa5.06□□□□□ -1.6
CALD1-221ENST00000489019 ZBTB39O15060 712 aa5.05□□□□□ -1.6
CALD1-221ENST00000489019 GDF11O95390 407 aa5.05□□□□□ -1.6
CALD1-221ENST00000489019 EPB42P16452 691 aa5.05□□□□□ -1.6
CALD1-221ENST00000489019 NFKB1P19838 968 aa5.05□□□□□ -1.6
CALD1-221ENST00000489019 BRD2P25440 801 aaKnown RBP5.05□□□□□ -1.6
CALD1-221ENST00000489019 TARSP26639 723 aaKnown RBP5.05□□□□□ -1.6
CALD1-221ENST00000489019 ADH7P40394 386 aa5.05□□□□□ -1.6
CALD1-221ENST00000489019 CCINQ13939 588 aa5.05□□□□□ -1.6
CALD1-221ENST00000489019 KANK3Q6NY19 840 aa5.05□□□□□ -1.6
CALD1-221ENST00000489019 KRT25Q7Z3Z0 450 aa5.05□□□□□ -1.6
CALD1-221ENST00000489019 PODNQ7Z5L7 613 aa5.05□□□□□ -1.6
CALD1-221ENST00000489019 RGL4Q8IZJ4 473 aa5.05□□□□□ -1.6
CALD1-221ENST00000489019 SUV39H2Q9H5I1 410 aa5.05□□□□□ -1.6
CALD1-221ENST00000489019 MKL2Q9ULH7 1088 aa5.05□□□□□ -1.6
CALD1-221ENST00000489019 RTCBQ9Y3I0 505 aaKnown RBP5.05□□□□□ -1.6
CALD1-221ENST00000489019 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.05□□□□□ -1.6
CALD1-221ENST00000489019 KCNMB2Q9Y691 235 aa5.05□□□□□ -1.6
CALD1-221ENST00000489019 PHF20L1A8MW92 1017 aa5.04□□□□□ -1.6
CALD1-221ENST00000489019 SASH3O75995 380 aa5.04□□□□□ -1.6
CALD1-221ENST00000489019 ALAS2P22557 587 aa5.04□□□□□ -1.6
CALD1-221ENST00000489019 COL8A1P27658 744 aa5.04□□□□□ -1.6
CALD1-221ENST00000489019 NEUROD1Q13562 356 aa5.04□□□□□ -1.6
CALD1-221ENST00000489019 TRIP4Q15650 581 aaPredicted RBP5.04□□□□□ -1.6
CALD1-221ENST00000489019 C8orf86Q6ZUL3 223 aa5.04□□□□□ -1.6
CALD1-221ENST00000489019 CMTR1Q8N1G2 835 aaKnown RBP5.04□□□□□ -1.6
CALD1-221ENST00000489019 TMEM151AQ8N4L1 468 aa5.04□□□□□ -1.6
CALD1-221ENST00000489019 PNMA5Q96PV4 448 aa5.04□□□□□ -1.6
CALD1-221ENST00000489019 UBE2OQ9C0C9 1292 aaKnown RBP5.04□□□□□ -1.6
CALD1-221ENST00000489019 IGFLR1Q9H665 355 aa5.04□□□□□ -1.6
CALD1-221ENST00000489019 EFCC1Q9HA90 598 aa5.04□□□□□ -1.6
CALD1-221ENST00000489019 STIM2Q9P246 746 aa5.04□□□□□ -1.6
CALD1-221ENST00000489019 EGFRP00533 1210 aa5.03□□□□□ -1.6
CALD1-221ENST00000489019 ALBP02768 609 aa5.03□□□□□ -1.6
CALD1-221ENST00000489019 TBC1D8BQ0IIM8 1120 aa5.03□□□□□ -1.6
CALD1-221ENST00000489019 COL9A3Q14050 684 aaPredicted RBP5.03□□□□□ -1.6
CALD1-221ENST00000489019 TRIM11Q96F44 468 aa5.03□□□□□ -1.6
CALD1-221ENST00000489019 DCAF5Q96JK2 942 aa5.03□□□□□ -1.6
CALD1-221ENST00000489019 C11orf16Q9NQ32 467 aa5.03□□□□□ -1.6
CALD1-221ENST00000489019 DNAJB12Q9NXW2 375 aaKnown RBP5.03□□□□□ -1.6
CALD1-221ENST00000489019 NAGPAQ9UK23 515 aa5.03□□□□□ -1.6
CALD1-221ENST00000489019 SLC6A14Q9UN76 642 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms