RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 ABCC12Q96J65 1359 aa22.61■■□□□ 1.21
ATG3-205ENST00000488910 LTBP3Q9NS15 1303 aa22.6■■□□□ 1.21
ATG3-205ENST00000488910 NLRP10Q86W26 655 aa22.6■■□□□ 1.21
ATG3-205ENST00000488910 HOXA10P31260 410 aaPredicted RBP22.59■■□□□ 1.21
ATG3-205ENST00000488910 PRELPP51888 382 aa22.59■■□□□ 1.21
ATG3-205ENST00000488910 NLRP3Q96P20 1036 aa22.59■■□□□ 1.21
ATG3-205ENST00000488910 TAOK3Q9H2K8 898 aa22.59■■□□□ 1.21
ATG3-205ENST00000488910 FER1L6Q2WGJ9 1857 aa22.59■■□□□ 1.21
ATG3-205ENST00000488910 KDM2BQ8NHM5 1336 aa22.58■■□□□ 1.21
ATG3-205ENST00000488910 KIF3CO14782 793 aa22.58■■□□□ 1.21
ATG3-205ENST00000488910 CCDC93Q567U6 631 aa22.58■■□□□ 1.21
ATG3-205ENST00000488910 CCDC30Q5VVM6 783 aa22.58■■□□□ 1.21
ATG3-205ENST00000488910 RPGRQ92834 1020 aaKnown RBP22.58■■□□□ 1.21
ATG3-205ENST00000488910 CACNA1SQ13698 1873 aa22.58■■□□□ 1.2
ATG3-205ENST00000488910 CCDC88AQ3V6T2 1871 aa22.58■■□□□ 1.2
ATG3-205ENST00000488910 SENP3-EIF4A1A0A087X0R7 540 aa22.57■■□□□ 1.2
ATG3-205ENST00000488910 WDR63Q8IWG1 891 aa22.57■■□□□ 1.2
ATG3-205ENST00000488910 FAM9BQ8IZU0 186 aa22.57■■□□□ 1.2
ATG3-205ENST00000488910 ANKRD36CQ5JPF3 1778 aa22.57■■□□□ 1.2
ATG3-205ENST00000488910 RTKN2Q8IZC4 609 aa22.56■■□□□ 1.2
ATG3-205ENST00000488910 TSR2Q969E8 191 aaKnown RBP22.56■■□□□ 1.2
ATG3-205ENST00000488910 RBM17Q96I25 401 aaKnown RBP22.56■■□□□ 1.2
ATG3-205ENST00000488910 CRAMP1Q96RY5 1269 aa22.56■■□□□ 1.2
ATG3-205ENST00000488910 TNRC6CQ9HCJ0 1690 aaKnown RBP22.55■■□□□ 1.2
ATG3-205ENST00000488910 TSPYL6Q8N831 410 aa22.55■■□□□ 1.2
ATG3-205ENST00000488910 ISCA1Q9BUE6 129 aa22.55■■□□□ 1.2
ATG3-205ENST00000488910 TRMT112Q9UI30 125 aaKnown RBP22.55■■□□□ 1.2
ATG3-205ENST00000488910 GOLGA2Q08379 1002 aa22.54■■□□□ 1.2
ATG3-205ENST00000488910 TRIM28Q13263 835 aaKnown RBP22.54■■□□□ 1.2
ATG3-205ENST00000488910 CC2D2BQ6DHV5 1058 aa22.54■■□□□ 1.2
ATG3-205ENST00000488910 RIC3Q7Z5B4 369 aa22.54■■□□□ 1.2
ATG3-205ENST00000488910 NMRK2Q9NPI5 230 aa22.54■■□□□ 1.2
ATG3-205ENST00000488910 SH3TC1Q8TE82 1336 aa22.54■■□□□ 1.2
ATG3-205ENST00000488910 GLTPD2A6NH11 291 aa22.53■■□□□ 1.2
ATG3-205ENST00000488910 GRIPAP1Q4V328 841 aa22.53■■□□□ 1.2
ATG3-205ENST00000488910 PHAXQ9H814 394 aaKnown RBP22.53■■□□□ 1.2
ATG3-205ENST00000488910 SALL2Q9Y467 1007 aaPredicted RBP22.53■■□□□ 1.2
ATG3-205ENST00000488910 FKBP4Q02790 459 aaKnown RBP eCLIP22.52■■□□□ 1.2
ATG3-205ENST00000488910 DPY19L2Q6NUT2 758 aa22.52■■□□□ 1.2
ATG3-205ENST00000488910 DICER1Q9UPY3 1922 aaKnown RBP22.52■■□□□ 1.2
ATG3-205ENST00000488910 TOMM70O94826 608 aa22.51■■□□□ 1.19
ATG3-205ENST00000488910 DDX58O95786 925 aaKnown RBP22.51■■□□□ 1.19
ATG3-205ENST00000488910 TWISTNBQ3B726 338 aaPredicted RBP22.51■■□□□ 1.19
ATG3-205ENST00000488910 C3orf67Q6ZVT6 689 aa22.51■■□□□ 1.19
ATG3-205ENST00000488910 ATP5J2-PTCD1G3V325 749 aa22.5■■□□□ 1.19
ATG3-205ENST00000488910 STK31Q9BXU1 1019 aa22.5■■□□□ 1.19
ATG3-205ENST00000488910 RRAGCQ9HB90 399 aa22.5■■□□□ 1.19
ATG3-205ENST00000488910 HCLS1P14317 486 aaPredicted RBP22.49■■□□□ 1.19
ATG3-205ENST00000488910 OLFM4Q6UX06 510 aa22.49■■□□□ 1.19
ATG3-205ENST00000488910 SYNE4Q8N205 404 aa22.49■■□□□ 1.19
ATG3-205ENST00000488910 C16orf71Q8IYS4 520 aaPredicted RBP22.48■■□□□ 1.19
ATG3-205ENST00000488910 PSMD1Q99460 953 aa22.48■■□□□ 1.19
ATG3-205ENST00000488910 FANCIQ9NVI1 1328 aa22.48■■□□□ 1.19
ATG3-205ENST00000488910 PPEF1O14829 653 aaPredicted RBP22.47■■□□□ 1.19
ATG3-205ENST00000488910 BBOX1O75936 387 aa22.47■■□□□ 1.19
ATG3-205ENST00000488910 FAM89AQ96GI7 184 aa22.47■■□□□ 1.19
ATG3-205ENST00000488910 TMX4Q9H1E5 349 aaPredicted RBP22.47■■□□□ 1.19
ATG3-205ENST00000488910 TIAM2Q8IVF5 1701 aa22.47■■□□□ 1.19
ATG3-205ENST00000488910 VEGFAP15692 232 aaPredicted RBP22.46■■□□□ 1.19
ATG3-205ENST00000488910 DDX46Q7L014 1031 aaKnown RBP22.46■■□□□ 1.19
ATG3-205ENST00000488910 METTL22Q9BUU2 404 aaPredicted RBP22.46■■□□□ 1.19
ATG3-205ENST00000488910 ZNF277Q9NRM2 450 aaPredicted RBP22.46■■□□□ 1.19
ATG3-205ENST00000488910 SLC4A2P04920 1241 aa22.45■■□□□ 1.18
ATG3-205ENST00000488910 HSP90B1P14625 803 aaKnown RBP22.45■■□□□ 1.18
ATG3-205ENST00000488910 KSR2Q6VAB6 950 aa22.45■■□□□ 1.18
ATG3-205ENST00000488910 CCDC191Q8NCU4 936 aa22.45■■□□□ 1.18
ATG3-205ENST00000488910 RBM46Q8TBY0 533 aaKnown RBP22.45■■□□□ 1.18
ATG3-205ENST00000488910 MYD88Q99836 296 aa22.45■■□□□ 1.18
ATG3-205ENST00000488910 MYH16Q9H6N6 1097 aa22.45■■□□□ 1.18
ATG3-205ENST00000488910 ABCC4O15439 1325 aa22.44■■□□□ 1.18
ATG3-205ENST00000488910 ZBTB38Q8NAP3 1195 aaPredicted RBP22.44■■□□□ 1.18
ATG3-205ENST00000488910 SNED1Q8TER0 1413 aa22.44■■□□□ 1.18
ATG3-205ENST00000488910 ATP6V0A2Q9Y487 856 aa22.44■■□□□ 1.18
ATG3-205ENST00000488910 VAMP4O75379 141 aa22.43■■□□□ 1.18
ATG3-205ENST00000488910 IARSP41252 1262 aaKnown RBP22.43■■□□□ 1.18
ATG3-205ENST00000488910 SF3B3Q15393 1217 aaKnown RBP22.43■■□□□ 1.18
ATG3-205ENST00000488910 ZNF428Q96B54 188 aa22.43■■□□□ 1.18
ATG3-205ENST00000488910 MAP3K2Q9Y2U5 619 aa22.43■■□□□ 1.18
ATG3-205ENST00000488910 LAMB2P55268 1798 aa22.43■■□□□ 1.18
ATG3-205ENST00000488910 PI4KAP2A4QPH2 592 aa22.42■■□□□ 1.18
ATG3-205ENST00000488910 IRS4O14654 1257 aaPredicted RBP22.42■■□□□ 1.18
ATG3-205ENST00000488910 TCERG1O14776 1098 aaKnown RBP22.42■■□□□ 1.18
ATG3-205ENST00000488910 HSPA6P17066 643 aa22.42■■□□□ 1.18
ATG3-205ENST00000488910 EXOSC9Q06265 439 aaKnown RBP22.42■■□□□ 1.18
ATG3-205ENST00000488910 GRAPQ13588 217 aa22.42■■□□□ 1.18
ATG3-205ENST00000488910 SP8Q8IXZ3 490 aa22.42■■□□□ 1.18
ATG3-205ENST00000488910 PI4KAP1Q8N8J0 262 aa22.42■■□□□ 1.18
ATG3-205ENST00000488910 GRAPLQ8TC17 118 aaPredicted RBP22.42■■□□□ 1.18
ATG3-205ENST00000488910 CWC25Q9NXE8 425 aaPredicted RBP22.42■■□□□ 1.18
ATG3-205ENST00000488910 CACNA1FO60840 1977 aa22.41■■□□□ 1.18
ATG3-205ENST00000488910 TMC4Q7Z404 712 aa22.41■■□□□ 1.18
ATG3-205ENST00000488910 SPINK5Q9NQ38 1064 aaPredicted RBP22.41■■□□□ 1.18
ATG3-205ENST00000488910 PCCAP05165 728 aaPredicted RBP22.4■■□□□ 1.18
ATG3-205ENST00000488910 NEXNQ0ZGT2 675 aa22.4■■□□□ 1.18
ATG3-205ENST00000488910 FSTL1Q12841 308 aa22.4■■□□□ 1.18
ATG3-205ENST00000488910 RTL5Q5HYW3 569 aaPredicted RBP22.4■■□□□ 1.18
ATG3-205ENST00000488910 JDP2Q8WYK2 163 aa22.4■■□□□ 1.18
ATG3-205ENST00000488910 VPS33BQ9H267 617 aa22.4■■□□□ 1.18
ATG3-205ENST00000488910 WDR90Q96KV7 1748 aa22.4■■□□□ 1.18
ATG3-205ENST00000488910 POTECB2RU33 542 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms