RNA–Protein interactions for RNA: ENST00000488443.1

UBAP2-211, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-211ENST00000488443 CNTNAP1P78357 1384 aa17.54■□□□□ 0.4
UBAP2-211ENST00000488443 C3orf67Q6ZVT6 689 aa17.54■□□□□ 0.4
UBAP2-211ENST00000488443 TSPYL4Q9UJ04 414 aa17.54■□□□□ 0.4
UBAP2-211ENST00000488443 COL4A5P29400 1685 aa17.54■□□□□ 0.4
UBAP2-211ENST00000488443 PASKQ96RG2 1323 aa17.53■□□□□ 0.4
UBAP2-211ENST00000488443 TMEM88BA6NKF7 163 aa17.53■□□□□ 0.4
UBAP2-211ENST00000488443 ERVV-1B6SEH8 477 aa17.53■□□□□ 0.4
UBAP2-211ENST00000488443 EIF6P56537 245 aaKnown RBP17.53■□□□□ 0.4
UBAP2-211ENST00000488443 FZD9O00144 591 aa17.52■□□□□ 0.4
UBAP2-211ENST00000488443 PPEF1O14829 653 aaPredicted RBP17.52■□□□□ 0.4
UBAP2-211ENST00000488443 FOXN1O15353 648 aa17.52■□□□□ 0.4
UBAP2-211ENST00000488443 VEGFBP49765 207 aa17.52■□□□□ 0.4
UBAP2-211ENST00000488443 LARGE2Q8N3Y3 721 aa17.52■□□□□ 0.4
UBAP2-211ENST00000488443 RBM17Q96I25 401 aaKnown RBP17.52■□□□□ 0.4
UBAP2-211ENST00000488443 RGL2O15211 777 aa17.51■□□□□ 0.39
UBAP2-211ENST00000488443 ITGBL1O95965 494 aaPredicted RBP17.51■□□□□ 0.39
UBAP2-211ENST00000488443 LMOD1P29536 600 aaPredicted RBP17.51■□□□□ 0.39
UBAP2-211ENST00000488443 GRM1Q13255 1194 aa17.51■□□□□ 0.39
UBAP2-211ENST00000488443 LTBP1Q14766 1721 aa17.51■□□□□ 0.39
UBAP2-211ENST00000488443 CRY2Q49AN0 593 aa17.51■□□□□ 0.39
UBAP2-211ENST00000488443 CNTROBQ8N137 903 aa17.51■□□□□ 0.39
UBAP2-211ENST00000488443 AIDAQ96BJ3 306 aa17.51■□□□□ 0.39
UBAP2-211ENST00000488443 ABT1Q9ULW3 272 aaKnown RBP17.51■□□□□ 0.39
UBAP2-211ENST00000488443 PCNTO95613 3336 aa17.51■□□□□ 0.39
UBAP2-211ENST00000488443 ADAMTSL1Q8N6G6 1762 aa17.51■□□□□ 0.39
UBAP2-211ENST00000488443 NTSR2O95665 410 aa17.5■□□□□ 0.39
UBAP2-211ENST00000488443 FMR1Q06787 632 aaKnown RBP eCLIP17.5■□□□□ 0.39
UBAP2-211ENST00000488443 AIMP1Q12904 312 aaKnown RBP17.5■□□□□ 0.39
UBAP2-211ENST00000488443 PROSER3Q2NL68 480 aa17.5■□□□□ 0.39
UBAP2-211ENST00000488443 PAXIP1Q6ZW49 1069 aaPredicted RBP17.5■□□□□ 0.39
UBAP2-211ENST00000488443 GPC2Q8N158 579 aa17.5■□□□□ 0.39
UBAP2-211ENST00000488443 PSMD1Q99460 953 aa17.5■□□□□ 0.39
UBAP2-211ENST00000488443 RIPK4P57078 832 aa17.49■□□□□ 0.39
UBAP2-211ENST00000488443 NEUROD2Q15784 382 aa17.49■□□□□ 0.39
UBAP2-211ENST00000488443 GIGYF2Q6Y7W6 1299 aaKnown RBP17.49■□□□□ 0.39
UBAP2-211ENST00000488443 PPP1R42Q7Z4L9 355 aa17.49■□□□□ 0.39
UBAP2-211ENST00000488443 PNMA8AQ86V59 439 aaPredicted RBP17.49■□□□□ 0.39
UBAP2-211ENST00000488443 ZNF34Q8IZ26 560 aa17.49■□□□□ 0.39
UBAP2-211ENST00000488443 SNED1Q8TER0 1413 aa17.48■□□□□ 0.39
UBAP2-211ENST00000488443 PPIP5K2O43314 1243 aa17.48■□□□□ 0.39
UBAP2-211ENST00000488443 EPS15P42566 896 aa17.48■□□□□ 0.39
UBAP2-211ENST00000488443 AOC3Q16853 763 aa17.48■□□□□ 0.39
UBAP2-211ENST00000488443 NIM1KQ8IY84 436 aa17.48■□□□□ 0.39
UBAP2-211ENST00000488443 CCDC146Q8IYE0 955 aa17.48■□□□□ 0.39
UBAP2-211ENST00000488443 PNNQ9H307 717 aaKnown RBP17.48■□□□□ 0.39
UBAP2-211ENST00000488443 LAS1LQ9Y4W2 734 aaKnown RBP17.48■□□□□ 0.39
UBAP2-211ENST00000488443 LAMB2P55268 1798 aa17.48■□□□□ 0.39
UBAP2-211ENST00000488443 CC2D2BQ6DHV5 1058 aa17.47■□□□□ 0.39
UBAP2-211ENST00000488443 NLRP3Q96P20 1036 aa17.47■□□□□ 0.39
UBAP2-211ENST00000488443 UTP14AQ9BVJ6 771 aaKnown RBP17.47■□□□□ 0.39
UBAP2-211ENST00000488443 TMX4Q9H1E5 349 aaPredicted RBP17.47■□□□□ 0.39
UBAP2-211ENST00000488443 ANKRD36CQ5JPF3 1778 aa17.47■□□□□ 0.39
UBAP2-211ENST00000488443 RIC1Q4ADV7 1423 aa17.47■□□□□ 0.39
UBAP2-211ENST00000488443 IBTKQ9P2D0 1353 aaPredicted RBP17.46■□□□□ 0.39
UBAP2-211ENST00000488443 HCLS1P14317 486 aaPredicted RBP17.46■□□□□ 0.39
UBAP2-211ENST00000488443 HOXA10P31260 410 aaPredicted RBP17.46■□□□□ 0.39
UBAP2-211ENST00000488443 CRAMP1Q96RY5 1269 aa17.46■□□□□ 0.39
UBAP2-211ENST00000488443 TAF1P21675 1872 aa17.46■□□□□ 0.38
UBAP2-211ENST00000488443 SCNN1DP51172 638 aa17.45■□□□□ 0.38
UBAP2-211ENST00000488443 PDIA6Q15084 440 aa17.45■□□□□ 0.38
UBAP2-211ENST00000488443 KRT24Q2M2I5 525 aa17.45■□□□□ 0.38
UBAP2-211ENST00000488443 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
UBAP2-211ENST00000488443 XAGE3Q8WTP9 111 aa17.45■□□□□ 0.38
UBAP2-211ENST00000488443 ABCC4O15439 1325 aa17.45■□□□□ 0.38
UBAP2-211ENST00000488443 ERBB4Q15303 1308 aa17.45■□□□□ 0.38
UBAP2-211ENST00000488443 TRAF5O00463 557 aa17.44■□□□□ 0.38
UBAP2-211ENST00000488443 CTCFP49711 727 aaPredicted RBP17.44■□□□□ 0.38
UBAP2-211ENST00000488443 LBX1P52954 281 aa17.44■□□□□ 0.38
UBAP2-211ENST00000488443 PARP10Q53GL7 1025 aa17.44■□□□□ 0.38
UBAP2-211ENST00000488443 COPS6Q7L5N1 327 aa17.44■□□□□ 0.38
UBAP2-211ENST00000488443 DDX21Q9NR30 783 aaKnown RBP eCLIP17.43■□□□□ 0.38
UBAP2-211ENST00000488443 WDR33Q9C0J8 1336 aaKnown RBP17.43■□□□□ 0.38
UBAP2-211ENST00000488443 TMPOP42166 694 aaKnown RBP17.42■□□□□ 0.38
UBAP2-211ENST00000488443 LRP10Q7Z4F1 713 aa17.42■□□□□ 0.38
UBAP2-211ENST00000488443 ATP6V0A2Q9Y487 856 aa17.42■□□□□ 0.38
UBAP2-211ENST00000488443 TRPM7Q96QT4 1865 aa17.41■□□□□ 0.38
UBAP2-211ENST00000488443 RASSF10A6NK89 507 aa17.41■□□□□ 0.38
UBAP2-211ENST00000488443 DPP8Q6V1X1 898 aaPredicted RBP17.41■□□□□ 0.38
UBAP2-211ENST00000488443 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
UBAP2-211ENST00000488443 RAD17O75943 681 aa17.4■□□□□ 0.38
UBAP2-211ENST00000488443 GMPSP49915 693 aaPredicted RBP17.4■□□□□ 0.38
UBAP2-211ENST00000488443 LMOD3Q0VAK6 560 aa17.4■□□□□ 0.38
UBAP2-211ENST00000488443 CYP4F22Q6NT55 531 aa17.4■□□□□ 0.38
UBAP2-211ENST00000488443 NLRP10Q86W26 655 aa17.4■□□□□ 0.38
UBAP2-211ENST00000488443 ZNF408Q9H9D4 720 aa17.4■□□□□ 0.38
UBAP2-211ENST00000488443 WBP1LQ9NX94 342 aa17.4■□□□□ 0.38
UBAP2-211ENST00000488443 CXCL9Q07325 125 aa17.39■□□□□ 0.37
UBAP2-211ENST00000488443 GRIPAP1Q4V328 841 aa17.39■□□□□ 0.37
UBAP2-211ENST00000488443 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
UBAP2-211ENST00000488443 DDX46Q7L014 1031 aaKnown RBP17.39■□□□□ 0.37
UBAP2-211ENST00000488443 MPNDQ8N594 471 aa17.39■□□□□ 0.37
UBAP2-211ENST00000488443 CAPNS2Q96L46 248 aa17.39■□□□□ 0.37
UBAP2-211ENST00000488443 BCL2L13Q9BXK5 485 aa17.39■□□□□ 0.37
UBAP2-211ENST00000488443 PRDM10Q9NQV6 1147 aa17.39■□□□□ 0.37
UBAP2-211ENST00000488443 CHPF2Q9P2E5 772 aa17.39■□□□□ 0.37
UBAP2-211ENST00000488443 HSPA8P11142 646 aaKnown RBP17.38■□□□□ 0.37
UBAP2-211ENST00000488443 DDX10Q13206 875 aaKnown RBP17.38■□□□□ 0.37
UBAP2-211ENST00000488443 HSP90AB3PQ58FF7 597 aa17.38■□□□□ 0.37
UBAP2-211ENST00000488443 USP50Q70EL3 339 aaPredicted RBP17.38■□□□□ 0.37
UBAP2-211ENST00000488443 SUPT20HQ8NEM7 779 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms