RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 RECKO95980 971 aa7.58□□□□□ -1.2
SRRM1-215ENST00000488317 BMP1P13497 986 aa7.58□□□□□ -1.2
SRRM1-215ENST00000488317 ATP4AP20648 1035 aa7.58□□□□□ -1.2
SRRM1-215ENST00000488317 ORC1Q13415 861 aa7.58□□□□□ -1.2
SRRM1-215ENST00000488317 BTLAQ7Z6A9 289 aa7.58□□□□□ -1.2
SRRM1-215ENST00000488317 PGBD3Q8N328 593 aa7.58□□□□□ -1.2
SRRM1-215ENST00000488317 CEP63Q96MT8 703 aa7.58□□□□□ -1.2
SRRM1-215ENST00000488317 BACH2Q9BYV9 841 aa7.58□□□□□ -1.2
SRRM1-215ENST00000488317 GPAMQ9HCL2 828 aa7.58□□□□□ -1.2
SRRM1-215ENST00000488317 VTI1BQ9UEU0 232 aa7.58□□□□□ -1.2
SRRM1-215ENST00000488317 DMGDHQ9UI17 866 aaKnown RBP7.58□□□□□ -1.2
SRRM1-215ENST00000488317 RTCBQ9Y3I0 505 aaKnown RBP7.58□□□□□ -1.2
SRRM1-215ENST00000488317 UBAP1LF5GYI3 381 aa7.57□□□□□ -1.2
SRRM1-215ENST00000488317 EIF1AYO14602 144 aaKnown RBP7.57□□□□□ -1.2
SRRM1-215ENST00000488317 SORBS3O60504 671 aa7.57□□□□□ -1.2
SRRM1-215ENST00000488317 GAS2L1Q99501 681 aaPredicted RBP7.57□□□□□ -1.2
SRRM1-215ENST00000488317 RNF19AQ9NV58 838 aa7.57□□□□□ -1.2
SRRM1-215ENST00000488317 SOS2Q07890 1332 aaPredicted RBP7.56□□□□□ -1.2
SRRM1-215ENST00000488317 EPB42P16452 691 aa7.56□□□□□ -1.2
SRRM1-215ENST00000488317 INPP5BP32019 993 aa7.56□□□□□ -1.2
SRRM1-215ENST00000488317 DAB2P98082 770 aa7.56□□□□□ -1.2
SRRM1-215ENST00000488317 MRPL58Q14197 206 aaKnown RBP7.56□□□□□ -1.2
SRRM1-215ENST00000488317 PKDCCQ504Y2 493 aa7.56□□□□□ -1.2
SRRM1-215ENST00000488317 TMC4Q7Z404 712 aa7.56□□□□□ -1.2
SRRM1-215ENST00000488317 ZNF438Q7Z4V0 828 aa7.56□□□□□ -1.2
SRRM1-215ENST00000488317 RUBCNLQ9H714 662 aa7.56□□□□□ -1.2
SRRM1-215ENST00000488317 CPNE3O75131 537 aaKnown RBP7.55□□□□□ -1.2
SRRM1-215ENST00000488317 AVPP01185 164 aa7.55□□□□□ -1.2
SRRM1-215ENST00000488317 TRIM46Q7Z4K8 759 aa7.55□□□□□ -1.2
SRRM1-215ENST00000488317 TMEM87AQ8NBN3 555 aa7.55□□□□□ -1.2
SRRM1-215ENST00000488317 ZFP42Q96MM3 310 aa7.55□□□□□ -1.2
SRRM1-215ENST00000488317 DNAJC25Q9H1X3 360 aa7.55□□□□□ -1.2
SRRM1-215ENST00000488317 AXIN1O15169 862 aa7.54□□□□□ -1.2
SRRM1-215ENST00000488317 RGS20O76081 388 aa7.54□□□□□ -1.2
SRRM1-215ENST00000488317 F11P03951 625 aa7.54□□□□□ -1.2
SRRM1-215ENST00000488317 CTC1Q2NKJ3 1217 aa7.54□□□□□ -1.2
SRRM1-215ENST00000488317 FBF1Q8TES7 1133 aa7.54□□□□□ -1.2
SRRM1-215ENST00000488317 USP35Q9P2H5 1018 aa7.54□□□□□ -1.2
SRRM1-215ENST00000488317 SCAMP3O14828 347 aaKnown RBP7.53□□□□□ -1.2
SRRM1-215ENST00000488317 PHACTR2O75167 634 aa7.53□□□□□ -1.2
SRRM1-215ENST00000488317 TNFRSF21O75509 655 aa7.53□□□□□ -1.2
SRRM1-215ENST00000488317 DGAT1O75907 488 aa7.53□□□□□ -1.2
SRRM1-215ENST00000488317 GNA15P30679 374 aa7.53□□□□□ -1.2
SRRM1-215ENST00000488317 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.53□□□□□ -1.24e-13■■□□□ 12.8
SRRM1-215ENST00000488317 PDE12Q6L8Q7 609 aaKnown RBP7.53□□□□□ -1.2
SRRM1-215ENST00000488317 ELP3Q9H9T3 547 aa7.53□□□□□ -1.2
SRRM1-215ENST00000488317 FOXD3Q9UJU5 478 aaPredicted RBP7.53□□□□□ -1.2
SRRM1-215ENST00000488317 SPG7Q9UQ90 795 aa7.53□□□□□ -1.2
SRRM1-215ENST00000488317 DYRK1BQ9Y463 629 aa7.53□□□□□ -1.2
SRRM1-215ENST00000488317 MAN1A2O60476 641 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 GFRA3O60609 400 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 IGSF3O75054 1194 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 XYLBO75191 536 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 TYRO3Q06418 890 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 TRIP4Q15650 581 aaPredicted RBP7.52□□□□□ -1.21
SRRM1-215ENST00000488317 EFHC2Q5JST6 749 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 XKR5Q6UX68 686 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 RIPOR1Q6ZS17 1223 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 SNX29Q8TEQ0 813 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 FRMD6Q96NE9 622 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 BRD7Q9NPI1 651 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 NLRP2Q9NX02 1062 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 DNMT3LQ9UJW3 386 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 KCNMB2Q9Y691 235 aa7.52□□□□□ -1.21
SRRM1-215ENST00000488317 SMCPP49901 116 aaPredicted RBP7.51□□□□□ -1.21
SRRM1-215ENST00000488317 TTC39BQ5VTQ0 682 aaPredicted RBP7.51□□□□□ -1.21
SRRM1-215ENST00000488317 C9orf131Q5VYM1 1079 aa7.51□□□□□ -1.21
SRRM1-215ENST00000488317 USPL1Q5W0Q7 1092 aa7.51□□□□□ -1.21
SRRM1-215ENST00000488317 NLRP8Q86W28 1048 aa7.51□□□□□ -1.21
SRRM1-215ENST00000488317 CCDC74AQ96AQ1 378 aa7.51□□□□□ -1.21
SRRM1-215ENST00000488317 CFHR5Q9BXR6 569 aa7.51□□□□□ -1.21
SRRM1-215ENST00000488317 CRISPLD1Q9H336 500 aa7.51□□□□□ -1.21
SRRM1-215ENST00000488317 ZFYVE28Q9HCC9 887 aa7.51□□□□□ -1.21
SRRM1-215ENST00000488317 TMEM63CQ9P1W3 806 aa7.51□□□□□ -1.21
SRRM1-215ENST00000488317 EIF4BP23588 611 aaKnown RBP7.5□□□□□ -1.21
SRRM1-215ENST00000488317 ERCC5P28715 1186 aaPredicted RBP7.5□□□□□ -1.21
SRRM1-215ENST00000488317 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.5□□□□□ -1.21
SRRM1-215ENST00000488317 AK5Q9Y6K8 562 aa7.5□□□□□ -1.21
SRRM1-215ENST00000488317 POLR3DP05423 398 aaPredicted RBP7.49□□□□□ -1.21
SRRM1-215ENST00000488317 HDLBPQ00341 1268 aaKnown RBP7.49□□□□□ -1.21
SRRM1-215ENST00000488317 ZCCHC2Q9C0B9 1178 aaKnown RBP7.49□□□□□ -1.21
SRRM1-215ENST00000488317 FIGNL1Q6PIW4 674 aa7.48□□□□□ -1.21
SRRM1-215ENST00000488317 NLRP13Q86W25 1043 aa7.48□□□□□ -1.21
SRRM1-215ENST00000488317 EPS8L3Q8TE67 593 aaKnown RBP7.48□□□□□ -1.21
SRRM1-215ENST00000488317 RNF34Q969K3 372 aa7.48□□□□□ -1.21
SRRM1-215ENST00000488317 ABI2Q9NYB9 513 aaPredicted RBP7.48□□□□□ -1.21
SRRM1-215ENST00000488317 KCNH4Q9UQ05 1017 aa7.48□□□□□ -1.21
SRRM1-215ENST00000488317 SOBPA7XYQ1 873 aa7.47□□□□□ -1.21
SRRM1-215ENST00000488317 NRG2O14511 850 aaPredicted RBP7.47□□□□□ -1.21
SRRM1-215ENST00000488317 KHNYNO15037 678 aaKnown RBP7.47□□□□□ -1.21
SRRM1-215ENST00000488317 ATXN7O15265 892 aaPredicted RBP7.47□□□□□ -1.21
SRRM1-215ENST00000488317 GADD45BO75293 160 aaPredicted RBP7.47□□□□□ -1.21
SRRM1-215ENST00000488317 GRNP28799 593 aaKnown RBP7.47□□□□□ -1.21
SRRM1-215ENST00000488317 IRS1P35568 1242 aa7.47□□□□□ -1.21
SRRM1-215ENST00000488317 ZNF76P36508 570 aa7.47□□□□□ -1.21
SRRM1-215ENST00000488317 ZC3H6P61129 1189 aaKnown RBP7.47□□□□□ -1.21
SRRM1-215ENST00000488317 LDLRAD1Q5T700 205 aa7.47□□□□□ -1.21
SRRM1-215ENST00000488317 SAMD5Q5TGI4 173 aa7.47□□□□□ -1.21
SRRM1-215ENST00000488317 PI16Q6UXB8 463 aa7.47□□□□□ -1.21
SRRM1-215ENST00000488317 KRT25Q7Z3Z0 450 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms