RNA–Protein interactions for RNA: ENST00000488196.5

STRADB-209, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-209ENST00000488196 PRPF40BQ6NWY9 871 aaKnown RBP30.1■■■□□ 2.41
STRADB-209ENST00000488196 SBF1O95248 1867 aa30.1■■■□□ 2.41
STRADB-209ENST00000488196 C9orf131Q5VYM1 1079 aa30.09■■■□□ 2.41
STRADB-209ENST00000488196 CHMP4AQ9BY43 222 aa30.09■■■□□ 2.41
STRADB-209ENST00000488196 ARFGEF2Q9Y6D5 1785 aa30.08■■■□□ 2.41
STRADB-209ENST00000488196 ATP5J2-PTCD1G3V325 749 aa30.07■■■□□ 2.4
STRADB-209ENST00000488196 EXOSC9Q06265 439 aaKnown RBP30.07■■■□□ 2.4
STRADB-209ENST00000488196 GOLGA2Q08379 1002 aa30.07■■■□□ 2.4
STRADB-209ENST00000488196 DIEXFQ68CQ4 756 aaKnown RBP30.07■■■□□ 2.4
STRADB-209ENST00000488196 C3orf67Q6ZVT6 689 aa30.07■■■□□ 2.4
STRADB-209ENST00000488196 RIC3Q7Z5B4 369 aa30.07■■■□□ 2.4
STRADB-209ENST00000488196 SYNE4Q8N205 404 aa30.07■■■□□ 2.4
STRADB-209ENST00000488196 ZNF521Q96K83 1311 aa30.06■■■□□ 2.4
STRADB-209ENST00000488196 CRY2Q49AN0 593 aa30.06■■■□□ 2.4
STRADB-209ENST00000488196 ZNF526Q8TF50 670 aaPredicted RBP30.06■■■□□ 2.4
STRADB-209ENST00000488196 ISCA1Q9BUE6 129 aa30.06■■■□□ 2.4
STRADB-209ENST00000488196 STK31Q9BXU1 1019 aa30.05■■■□□ 2.4
STRADB-209ENST00000488196 RNF181Q9P0P0 153 aa30.05■■■□□ 2.4
STRADB-209ENST00000488196 TRMT112Q9UI30 125 aaKnown RBP30.05■■■□□ 2.4
STRADB-209ENST00000488196 RIC1Q4ADV7 1423 aa30.05■■■□□ 2.4
STRADB-209ENST00000488196 CCDC88AQ3V6T2 1871 aa30.04■■■□□ 2.4
STRADB-209ENST00000488196 NFKBIEO00221 500 aa30.04■■■□□ 2.4
STRADB-209ENST00000488196 PRELPP51888 382 aa30.04■■■□□ 2.4
STRADB-209ENST00000488196 SLC10A5Q5PT55 438 aa30.04■■■□□ 2.4
STRADB-209ENST00000488196 MYH16Q9H6N6 1097 aa30.04■■■□□ 2.4
STRADB-209ENST00000488196 VAMP4O75379 141 aa30.03■■■□□ 2.4
STRADB-209ENST00000488196 FER1L6Q2WGJ9 1857 aa30.02■■■□□ 2.4
STRADB-209ENST00000488196 HCLS1P14317 486 aaPredicted RBP30.02■■■□□ 2.4
STRADB-209ENST00000488196 G2E3Q7L622 706 aa30.02■■■□□ 2.4
STRADB-209ENST00000488196 C7orf43Q8WVR3 580 aa30.02■■■□□ 2.4
STRADB-209ENST00000488196 RPGRQ92834 1020 aaKnown RBP30.02■■■□□ 2.4
STRADB-209ENST00000488196 RNF123Q5XPI4 1314 aa30.01■■■□□ 2.4
STRADB-209ENST00000488196 SLC4A2P04920 1241 aa30.01■■■□□ 2.39
STRADB-209ENST00000488196 ALDH1B1P30837 517 aa30.01■■■□□ 2.39
STRADB-209ENST00000488196 MIER1Q8N108 512 aa30.01■■■□□ 2.39
STRADB-209ENST00000488196 NLRP3Q96P20 1036 aa30.01■■■□□ 2.39
STRADB-209ENST00000488196 SH3TC1Q8TE82 1336 aa30■■■□□ 2.39
STRADB-209ENST00000488196 OLFM4Q6UX06 510 aa30■■■□□ 2.39
STRADB-209ENST00000488196 MYD88Q99836 296 aa30■■■□□ 2.39
STRADB-209ENST00000488196 DDX58O95786 925 aaKnown RBP29.99■■■□□ 2.39
STRADB-209ENST00000488196 HOXA10P31260 410 aaPredicted RBP29.99■■■□□ 2.39
STRADB-209ENST00000488196 GPBP1L1Q9HC44 474 aaPredicted RBP29.99■■■□□ 2.39
STRADB-209ENST00000488196 LMNB1P20700 586 aa29.98■■■□□ 2.39
STRADB-209ENST00000488196 TRIM28Q13263 835 aaKnown RBP29.98■■■□□ 2.39
STRADB-209ENST00000488196 FAM89AQ96GI7 184 aa29.98■■■□□ 2.39
STRADB-209ENST00000488196 MAP3K2Q9Y2U5 619 aa29.98■■■□□ 2.39
STRADB-209ENST00000488196 LAMB2P55268 1798 aa29.98■■■□□ 2.39
STRADB-209ENST00000488196 SOGA3Q5TF21 947 aa29.97■■■□□ 2.39
STRADB-209ENST00000488196 RBM17Q96I25 401 aaKnown RBP29.97■■■□□ 2.39
STRADB-209ENST00000488196 CACNA1FO60840 1977 aa29.97■■■□□ 2.39
STRADB-209ENST00000488196 PI4KAP2A4QPH2 592 aa29.96■■■□□ 2.39
STRADB-209ENST00000488196 RTL5Q5HYW3 569 aaPredicted RBP29.96■■■□□ 2.39
STRADB-209ENST00000488196 KSR2Q6VAB6 950 aa29.96■■■□□ 2.39
STRADB-209ENST00000488196 PI4KAP1Q8N8J0 262 aa29.96■■■□□ 2.39
STRADB-209ENST00000488196 METTL22Q9BUU2 404 aaPredicted RBP29.96■■■□□ 2.39
STRADB-209ENST00000488196 CCDC93Q567U6 631 aa29.95■■■□□ 2.39
STRADB-209ENST00000488196 CRAMP1Q96RY5 1269 aa29.95■■■□□ 2.39
STRADB-209ENST00000488196 TAOK3Q9H2K8 898 aa29.95■■■□□ 2.39
STRADB-209ENST00000488196 DDX60Q8IY21 1712 aaKnown RBP29.93■■■□□ 2.38
STRADB-209ENST00000488196 LTBP3Q9NS15 1303 aa29.93■■■□□ 2.38
STRADB-209ENST00000488196 FLIIQ13045 1269 aa29.92■■■□□ 2.38
STRADB-209ENST00000488196 SLC51AQ86UW1 340 aa29.92■■■□□ 2.38
STRADB-209ENST00000488196 CCDC191Q8NCU4 936 aa29.91■■■□□ 2.38
STRADB-209ENST00000488196 JARID2Q92833 1246 aaPredicted RBP29.9■■■□□ 2.38
STRADB-209ENST00000488196 CWC25Q9NXE8 425 aaPredicted RBP29.9■■■□□ 2.38
STRADB-209ENST00000488196 DICER1Q9UPY3 1922 aaKnown RBP29.9■■■□□ 2.38
STRADB-209ENST00000488196 TAF1P21675 1872 aa29.89■■■□□ 2.38
STRADB-209ENST00000488196 E9PSI1 815 aa29.89■■■□□ 2.38
STRADB-209ENST00000488196 IRS4O14654 1257 aaPredicted RBP29.89■■■□□ 2.38
STRADB-209ENST00000488196 IGKV5-2P06315 115 aa29.89■■■□□ 2.38
STRADB-209ENST00000488196 ZBTB38Q8NAP3 1195 aaPredicted RBP29.89■■■□□ 2.38
STRADB-209ENST00000488196 CDCA7LQ96GN5 454 aa29.89■■■□□ 2.38
STRADB-209ENST00000488196 ABCC4O15439 1325 aa29.89■■■□□ 2.38
STRADB-209ENST00000488196 PPEF1O14829 653 aaPredicted RBP29.88■■■□□ 2.37
STRADB-209ENST00000488196 SLFN5Q08AF3 891 aa29.88■■■□□ 2.37
STRADB-209ENST00000488196 FKBP5Q13451 457 aaPredicted RBP29.88■■■□□ 2.37
STRADB-209ENST00000488196 RTKN2Q8IZC4 609 aa29.88■■■□□ 2.37
STRADB-209ENST00000488196 TIAM2Q8IVF5 1701 aa29.88■■■□□ 2.37
STRADB-209ENST00000488196 FKBP4Q02790 459 aaKnown RBP eCLIP29.87■■■□□ 2.37
STRADB-209ENST00000488196 NEXNQ0ZGT2 675 aa29.86■■■□□ 2.37
STRADB-209ENST00000488196 DDX46Q7L014 1031 aaKnown RBP29.86■■■□□ 2.37
STRADB-209ENST00000488196 NMRK2Q9NPI5 230 aa29.86■■■□□ 2.37
STRADB-209ENST00000488196 PCCAP05165 728 aaPredicted RBP29.85■■■□□ 2.37
STRADB-209ENST00000488196 CWF19L2Q2TBE0 894 aaKnown RBP29.85■■■□□ 2.37
STRADB-209ENST00000488196 ZNF277Q9NRM2 450 aaPredicted RBP29.85■■■□□ 2.37
STRADB-209ENST00000488196 ZC3H4Q9UPT8 1303 aaKnown RBP29.85■■■□□ 2.37
STRADB-209ENST00000488196 SNED1Q8TER0 1413 aa29.85■■■□□ 2.37
STRADB-209ENST00000488196 SF3B3Q15393 1217 aaKnown RBP29.84■■■□□ 2.37
STRADB-209ENST00000488196 CC2D2BQ6DHV5 1058 aa29.84■■■□□ 2.37
STRADB-209ENST00000488196 KIF3CO14782 793 aa29.83■■■□□ 2.37
STRADB-209ENST00000488196 DNAAF4Q8WXU2 420 aa29.83■■■□□ 2.37
STRADB-209ENST00000488196 NEURL1BA8MQ27 555 aa29.82■■■□□ 2.36
STRADB-209ENST00000488196 C1QTNF8P60827 252 aa29.82■■■□□ 2.36
STRADB-209ENST00000488196 GRAPQ13588 217 aa29.82■■■□□ 2.36
STRADB-209ENST00000488196 GRAPLQ8TC17 118 aaPredicted RBP29.82■■■□□ 2.36
STRADB-209ENST00000488196 ATP6V0A2Q9Y487 856 aa29.82■■■□□ 2.36
STRADB-209ENST00000488196 KDM2BQ8NHM5 1336 aa29.81■■■□□ 2.36
STRADB-209ENST00000488196 BBOX1O75936 387 aa29.81■■■□□ 2.36
STRADB-209ENST00000488196 F6X3S4 739 aa29.8■■■□□ 2.36
STRADB-209ENST00000488196 PSMD1Q99460 953 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms