RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 ANKRD36CQ5JPF3 1778 aa3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 USP42Q9H9J4 1324 aaKnown RBP3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 ZBTB7AO95365 584 aa3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 YBX3P16989 372 aaKnown RBP eCLIP3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 NOM1Q5C9Z4 860 aaKnown RBP3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 RNF166Q96A37 237 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 HIRIP3Q9BW71 556 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 NPDC1Q9NQX5 325 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 NLRP2Q9NX02 1062 aa3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 ANKRD31Q8N7Z5 1873 aa3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 TRPM7Q96QT4 1865 aa3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 COL3A1P02461 1466 aaPredicted RBP3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 ERBB4Q15303 1308 aa3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 KLRG2A4D1S0 409 aaPredicted RBP3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 HTATSF1O43719 755 aaKnown RBP3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 PHKG2P15735 406 aa3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 PLEKHO1Q53GL0 409 aaPredicted RBP3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 BABAM1Q9NWV8 329 aa3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 SNED1Q8TER0 1413 aa3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 CNTNAP1P78357 1384 aa3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 SOS1Q07889 1333 aaPredicted RBP3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 KIF7Q2M1P5 1343 aa3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 LOC102724428A0A0B4J2F2 783 aa3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 TM4SF1P30408 202 aa3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 SIK1P57059 783 aa3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 BEGAINQ9BUH8 593 aa3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 KDM3BQ7LBC6 1761 aa3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 COL11A2P13942 1736 aaPredicted RBP3.76□□□□□ -1.81
DEPDC1-203ENST00000488146 COL1A1P02452 1464 aaPredicted RBP3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 AMPHP49418 695 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 MCM6Q14566 821 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 KHSRPQ92945 711 aaKnown RBP eCLIP3.75□□□□□ -1.813e-6■■□□□ 13.4
DEPDC1-203ENST00000488146 PIM2Q9P1W9 311 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 RTCBQ9Y3I0 505 aaKnown RBP3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 IQCA1LA6NCM1 817 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 UNCXA6NJT0 531 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 FYB1O15117 783 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 LMNB1P20700 586 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 CSPP1Q1MSJ5 1256 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 TMC4Q7Z404 712 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 NME9Q86XW9 330 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 CARD11Q9BXL7 1154 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 SAGE1Q9NXZ1 904 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 TMOD3Q9NYL9 352 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 PARP3Q9Y6F1 533 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 PSME4Q14997 1843 aa3.75□□□□□ -1.81
DEPDC1-203ENST00000488146 PASKQ96RG2 1323 aa3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 SSTR3P32745 418 aaPredicted RBP3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 SAFB2Q14151 953 aaKnown RBP eCLIP3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 DALRD3Q5D0E6 543 aaKnown RBP3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 AKAP4Q5JQC9 854 aa3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 TRAPPC3LQ5T215 181 aa3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 CLEC4GQ6UXB4 293 aa3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 NARFQ9UHQ1 456 aa3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 LTBP1Q14766 1721 aa3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 CARMIL3Q8ND23 1372 aa3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 GLTPD2A6NH11 291 aa3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 CYP27B1O15528 508 aa3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 TBC1D12O60347 775 aa3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 LDHDQ86WU2 507 aa3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 C16orf71Q8IYS4 520 aaPredicted RBP3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 PCMTD1Q96MG8 357 aaPredicted RBP3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 SNRKQ9NRH2 765 aa3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 PCDHGA10Q9Y5H3 936 aa3.74□□□□□ -1.81
DEPDC1-203ENST00000488146 RASSF10A6NK89 507 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 TRAK2O60296 914 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 GYS1P13807 737 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 PDE6BP35913 854 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 CTCFP49711 727 aaPredicted RBP3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 LINC00116Q8NCU8 138 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 NLGN2Q8NFZ4 835 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 ATG3Q9NT62 314 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 MYH14Q7Z406 1995 aaKnown RBP3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 POLRMTO00411 1230 aaKnown RBP3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 VEGFAP15692 232 aaPredicted RBP3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 KCNA3P22001 575 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 NBPF6Q5VWK0 638 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 PADI6Q6TGC4 694 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 ANKRD13DQ6ZTN6 518 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 PIGBQ92521 554 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 CNKSR1Q969H4 720 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 NBPF4Q96M43 638 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 PSMD1Q99460 953 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 BRIP1Q9BX63 1249 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 CFHR5Q9BXR6 569 aa3.73□□□□□ -1.81
DEPDC1-203ENST00000488146 NUDT7P0C024 238 aa3.72□□□□□ -1.81
DEPDC1-203ENST00000488146 PNMA8AQ86V59 439 aaPredicted RBP3.72□□□□□ -1.81
DEPDC1-203ENST00000488146 PGAP2Q9UHJ9 254 aa3.72□□□□□ -1.81
DEPDC1-203ENST00000488146 CARNS1A5YM72 827 aa3.72□□□□□ -1.81
DEPDC1-203ENST00000488146 IL6STP40189 918 aaPredicted RBP3.72□□□□□ -1.81
DEPDC1-203ENST00000488146 MAP2K1Q02750 393 aaPredicted RBP3.72□□□□□ -1.81
DEPDC1-203ENST00000488146 PNISRQ8TF01 805 aaKnown RBP3.72□□□□□ -1.81
DEPDC1-203ENST00000488146 GPCPD1Q9NPB8 672 aa3.72□□□□□ -1.81
DEPDC1-203ENST00000488146 COL15A1P39059 1388 aa3.72□□□□□ -1.81
DEPDC1-203ENST00000488146 MAP2K2P36507 400 aa3.71□□□□□ -1.82
DEPDC1-203ENST00000488146 ECE1P42892 770 aa3.71□□□□□ -1.82
DEPDC1-203ENST00000488146 FLIIQ13045 1269 aa3.71□□□□□ -1.82
DEPDC1-203ENST00000488146 FAM182BQ5T319 152 aa3.71□□□□□ -1.82
DEPDC1-203ENST00000488146 METTL3Q86U44 580 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms