RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 NCOA7Q8NI08 942 aa16.97■□□□□ 0.31
EPHB4-206ENST00000487222 CALCOCO1Q9P1Z2 691 aa16.97■□□□□ 0.31
EPHB4-206ENST00000487222 POTEJP0CG39 1038 aa16.97■□□□□ 0.31
EPHB4-206ENST00000487222 PAF1Q8N7H5 531 aa16.97■□□□□ 0.31
EPHB4-206ENST00000487222 GBP2P32456 591 aaPredicted RBP16.97■□□□□ 0.31
EPHB4-206ENST00000487222 MAPKBP1O60336 1514 aa16.97■□□□□ 0.31
EPHB4-206ENST00000487222 TMEM67Q5HYA8 995 aa16.97■□□□□ 0.31
EPHB4-206ENST00000487222 UBE3BQ7Z3V4 1068 aa16.97■□□□□ 0.31
EPHB4-206ENST00000487222 A2MP01023 1474 aa16.97■□□□□ 0.31
EPHB4-206ENST00000487222 TTC21AQ8NDW8 1320 aa16.96■□□□□ 0.31
EPHB4-206ENST00000487222 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.31
EPHB4-206ENST00000487222 DESP17661 470 aa16.96■□□□□ 0.31
EPHB4-206ENST00000487222 CEP135Q66GS9 1140 aa16.96■□□□□ 0.31
EPHB4-206ENST00000487222 CWC25Q9NXE8 425 aaPredicted RBP16.96■□□□□ 0.31
EPHB4-206ENST00000487222 TMOD2Q9NZR1 351 aa16.96■□□□□ 0.31
EPHB4-206ENST00000487222 CCDC171Q6TFL3 1326 aa16.96■□□□□ 0.3
EPHB4-206ENST00000487222 METAP2P50579 478 aaKnown RBP eCLIP16.96■□□□□ 0.39e-7■■■□□ 14.6
EPHB4-206ENST00000487222 BRF1Q92994 677 aa16.96■□□□□ 0.3
EPHB4-206ENST00000487222 POLR3GO15318 223 aaPredicted RBP16.95■□□□□ 0.3
EPHB4-206ENST00000487222 ZPR1O75312 459 aa16.95■□□□□ 0.3
EPHB4-206ENST00000487222 PPP4R3BQ5MIZ7 849 aa16.95■□□□□ 0.3
EPHB4-206ENST00000487222 MRPL50Q8N5N7 158 aaKnown RBP16.95■□□□□ 0.3
EPHB4-206ENST00000487222 FAM200AQ8TCP9 573 aa16.95■□□□□ 0.3
EPHB4-206ENST00000487222 ZBTB3Q9H5J0 574 aa16.95■□□□□ 0.3
EPHB4-206ENST00000487222 LDHAL6AQ6ZMR3 332 aa16.95■□□□□ 0.3
EPHB4-206ENST00000487222 MPHOSPH10O00566 681 aaKnown RBP16.95■□□□□ 0.3
EPHB4-206ENST00000487222 TDRD12Q587J7 1177 aaKnown RBP16.95■□□□□ 0.3
EPHB4-206ENST00000487222 TEX13AQ9BXU3 409 aaPredicted RBP16.95■□□□□ 0.3
EPHB4-206ENST00000487222 POLR3AO14802 1390 aaPredicted RBP16.95■□□□□ 0.3
EPHB4-206ENST00000487222 BMS1Q14692 1282 aaKnown RBP16.95■□□□□ 0.3
EPHB4-206ENST00000487222 CADPS2Q86UW7 1296 aa16.95■□□□□ 0.3
EPHB4-206ENST00000487222 MICU3Q86XE3 530 aa16.95■□□□□ 0.3
EPHB4-206ENST00000487222 SNRKQ9NRH2 765 aa16.95■□□□□ 0.3
EPHB4-206ENST00000487222 PPP1R1BQ9UD71 204 aaPredicted RBP16.95■□□□□ 0.3
EPHB4-206ENST00000487222 ASXL2Q76L83 1435 aa16.94■□□□□ 0.3
EPHB4-206ENST00000487222 ITSN2Q9NZM3 1697 aa16.94■□□□□ 0.3
EPHB4-206ENST00000487222 SSR1P43307 286 aaKnown RBP16.94■□□□□ 0.3
EPHB4-206ENST00000487222 MTIF2P46199 727 aaKnown RBP16.94■□□□□ 0.3
EPHB4-206ENST00000487222 TNIP1Q15025 636 aa16.94■□□□□ 0.3
EPHB4-206ENST00000487222 TCP11L1Q9NUJ3 509 aa16.94■□□□□ 0.3
EPHB4-206ENST00000487222 SYCP2Q9BX26 1530 aa16.94■□□□□ 0.3
EPHB4-206ENST00000487222 HAND2P61296 217 aa16.94■□□□□ 0.3
EPHB4-206ENST00000487222 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
EPHB4-206ENST00000487222 NECAB1Q8N987 351 aa16.94■□□□□ 0.3
EPHB4-206ENST00000487222 ANKRD24Q8TF21 1146 aa16.94■□□□□ 0.3
EPHB4-206ENST00000487222 EXOC5O00471 708 aa16.94■□□□□ 0.3
EPHB4-206ENST00000487222 ATP8B2P98198 1209 aa16.94■□□□□ 0.3
EPHB4-206ENST00000487222 AMPD3Q01432 767 aa16.94■□□□□ 0.3
EPHB4-206ENST00000487222 KIF5BP33176 963 aa16.93■□□□□ 0.3
EPHB4-206ENST00000487222 CNPY2Q9Y2B0 182 aa16.93■□□□□ 0.3
EPHB4-206ENST00000487222 UHRF1BP1LA0JNW5 1464 aa16.93■□□□□ 0.3
EPHB4-206ENST00000487222 CRACR2BQ8N4Y2 399 aaPredicted RBP16.93■□□□□ 0.3
EPHB4-206ENST00000487222 DYDC1Q8WWB3 177 aa16.93■□□□□ 0.3
EPHB4-206ENST00000487222 ALS2CR12Q96Q35 445 aa16.93■□□□□ 0.3
EPHB4-206ENST00000487222 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
EPHB4-206ENST00000487222 FBLN1P23142 703 aa16.93■□□□□ 0.3
EPHB4-206ENST00000487222 NOLC1Q14978 699 aaKnown RBP eCLIP16.93■□□□□ 0.31e-5■□□□□ 10.6
EPHB4-206ENST00000487222 CCDC12Q8WUD4 166 aaPredicted RBP16.93■□□□□ 0.3
EPHB4-206ENST00000487222 PUS7Q96PZ0 661 aaKnown RBP16.93■□□□□ 0.3
EPHB4-206ENST00000487222 NAA15Q9BXJ9 866 aaKnown RBP16.93■□□□□ 0.3
EPHB4-206ENST00000487222 GNG11P61952 73 aa16.93■□□□□ 0.3
EPHB4-206ENST00000487222 SMC5Q8IY18 1101 aa16.93■□□□□ 0.3
EPHB4-206ENST00000487222 SMARCC1Q92922 1105 aaPredicted RBP16.93■□□□□ 0.3
EPHB4-206ENST00000487222 PODXL2Q9NZ53 605 aa16.93■□□□□ 0.3
EPHB4-206ENST00000487222 RBM8AQ9Y5S9 174 aaKnown RBP16.93■□□□□ 0.3
EPHB4-206ENST00000487222 MFSD6Q6ZSS7 791 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 KCNG4Q8TDN1 519 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 PANK2Q9BZ23 570 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 UBA7P41226 1012 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 SYKP43405 635 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 ZNF518AQ6AHZ1 1483 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 ZFYP08048 801 aaPredicted RBP16.92■□□□□ 0.3
EPHB4-206ENST00000487222 SNRPA1P09661 255 aaKnown RBP16.92■□□□□ 0.3
EPHB4-206ENST00000487222 CCDC178Q5BJE1 867 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 FAM114A1Q8IWE2 563 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 FAM107BQ9H098 131 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 INCENPQ9NQS7 918 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 ZKSCAN5Q9Y2L8 839 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 ADAMTS2O95450 1211 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 MATR3P43243 847 aaKnown RBP eCLIP16.92■□□□□ 0.3
EPHB4-206ENST00000487222 IFFO1Q0D2I5 559 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 CALML4Q96GE6 196 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 UBA5Q9GZZ9 404 aa16.92■□□□□ 0.3
EPHB4-206ENST00000487222 F13A1P00488 732 aa16.91■□□□□ 0.3
EPHB4-206ENST00000487222 ANKRD13DQ6ZTN6 518 aa16.91■□□□□ 0.3
EPHB4-206ENST00000487222 SLC26A6Q9BXS9 759 aa16.91■□□□□ 0.3
EPHB4-206ENST00000487222 RBM25P49756 843 aaKnown RBP16.91■□□□□ 0.3
EPHB4-206ENST00000487222 RAB3GAP1Q15042 981 aa16.91■□□□□ 0.3
EPHB4-206ENST00000487222 C8orf58Q8NAV2 365 aa16.91■□□□□ 0.3
EPHB4-206ENST00000487222 KLF18A0A0U1RQI7 1052 aa16.91■□□□□ 0.3
EPHB4-206ENST00000487222 MAP2K1Q02750 393 aaPredicted RBP16.91■□□□□ 0.3
EPHB4-206ENST00000487222 ANO6Q4KMQ2 910 aa16.91■□□□□ 0.3
EPHB4-206ENST00000487222 CCDC144CPQ8IYA2 1237 aa16.91■□□□□ 0.3
EPHB4-206ENST00000487222 ANKIB1Q9P2G1 1089 aa16.91■□□□□ 0.3
EPHB4-206ENST00000487222 GPTP24298 496 aa16.91■□□□□ 0.3
EPHB4-206ENST00000487222 DDX46Q7L014 1031 aaKnown RBP16.91■□□□□ 0.3
EPHB4-206ENST00000487222 TMX1Q9H3N1 280 aa16.91■□□□□ 0.3
EPHB4-206ENST00000487222 DCTPP1Q9H773 170 aa16.91■□□□□ 0.3
EPHB4-206ENST00000487222 ANXA1P04083 346 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms