RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 PALLDQ8WX93 1383 aa8.72□□□□□ -1.01
SF3A3-206ENST00000487062 COL5A3P25940 1745 aaPredicted RBP8.71□□□□□ -1.01
SF3A3-206ENST00000487062 NUP98P52948 1817 aa8.71□□□□□ -1.01
SF3A3-206ENST00000487062 A0A087WZG4 1122 aa8.71□□□□□ -1.02
SF3A3-206ENST00000487062 LOC102724428A0A0B4J2F2 783 aa8.71□□□□□ -1.02
SF3A3-206ENST00000487062 APBB1O00213 710 aa8.71□□□□□ -1.02
SF3A3-206ENST00000487062 ONECUT3O60422 494 aaPredicted RBP8.71□□□□□ -1.02
SF3A3-206ENST00000487062 EIF5BO60841 1220 aaKnown RBP8.71□□□□□ -1.02
SF3A3-206ENST00000487062 SURF6O75683 361 aaKnown RBP8.71□□□□□ -1.02
SF3A3-206ENST00000487062 ATP6V1AP38606 617 aa8.71□□□□□ -1.02
SF3A3-206ENST00000487062 IL6STP40189 918 aaPredicted RBP8.71□□□□□ -1.02
SF3A3-206ENST00000487062 SIK1P57059 783 aa8.71□□□□□ -1.02
SF3A3-206ENST00000487062 BMP2KLQ5H9B9 411 aa8.71□□□□□ -1.02
SF3A3-206ENST00000487062 CCDC191Q8NCU4 936 aa8.71□□□□□ -1.02
SF3A3-206ENST00000487062 SUCLG2Q96I99 432 aa8.71□□□□□ -1.02
SF3A3-206ENST00000487062 SLC4A9Q96Q91 983 aa8.71□□□□□ -1.02
SF3A3-206ENST00000487062 ZBTB3Q9H5J0 574 aa8.71□□□□□ -1.02
SF3A3-206ENST00000487062 CWC25Q9NXE8 425 aaPredicted RBP8.71□□□□□ -1.02
SF3A3-206ENST00000487062 EXOC6BQ9Y2D4 811 aa8.71□□□□□ -1.02
SF3A3-206ENST00000487062 ZNF330Q9Y3S2 320 aaPredicted RBP8.71□□□□□ -1.02
SF3A3-206ENST00000487062 ATP5J2-PTCD1G3V325 749 aa8.7□□□□□ -1.02
SF3A3-206ENST00000487062 OS9Q13438 667 aaPredicted RBP8.7□□□□□ -1.02
SF3A3-206ENST00000487062 TCIRG1Q13488 830 aa8.7□□□□□ -1.02
SF3A3-206ENST00000487062 ERC1Q8IUD2 1116 aa8.7□□□□□ -1.02
SF3A3-206ENST00000487062 KIF1BPQ96EK5 621 aa8.7□□□□□ -1.02
SF3A3-206ENST00000487062 BICC1Q9H694 974 aaKnown RBP8.7□□□□□ -1.02
SF3A3-206ENST00000487062 QTRT2Q9H974 415 aaKnown RBP8.7□□□□□ -1.02
SF3A3-206ENST00000487062 UPF2Q9HAU5 1272 aaKnown RBP8.7□□□□□ -1.02
SF3A3-206ENST00000487062 CCDC87Q9NVE4 849 aa8.7□□□□□ -1.02
SF3A3-206ENST00000487062 MAP3K15Q6ZN16 1313 aa8.7□□□□□ -1.02
SF3A3-206ENST00000487062 ERVV-1B6SEH8 477 aa8.69□□□□□ -1.02
SF3A3-206ENST00000487062 H7C1W4 665 aa8.69□□□□□ -1.02
SF3A3-206ENST00000487062 KCNQ2O43526 872 aa8.69□□□□□ -1.02
SF3A3-206ENST00000487062 SMARCA5O60264 1052 aaPredicted RBP8.69□□□□□ -1.02
SF3A3-206ENST00000487062 CHRM1P11229 460 aaPredicted RBP8.69□□□□□ -1.02
SF3A3-206ENST00000487062 TRIM28Q13263 835 aaKnown RBP8.69□□□□□ -1.02
SF3A3-206ENST00000487062 GIGYF2Q6Y7W6 1299 aaKnown RBP8.69□□□□□ -1.02
SF3A3-206ENST00000487062 UBE3BQ7Z3V4 1068 aa8.69□□□□□ -1.02
SF3A3-206ENST00000487062 PLEKHM2Q8IWE5 1019 aa8.69□□□□□ -1.02
SF3A3-206ENST00000487062 ISCA1Q9BUE6 129 aa8.69□□□□□ -1.02
SF3A3-206ENST00000487062 RYDENQ9NUL5 291 aaKnown RBP8.69□□□□□ -1.02
SF3A3-206ENST00000487062 ZBTB1Q9Y2K1 713 aa8.69□□□□□ -1.02
SF3A3-206ENST00000487062 NOP58Q9Y2X3 529 aaKnown RBP8.69□□□□□ -1.02
SF3A3-206ENST00000487062 CRKLP46109 303 aaKnown RBP8.68□□□□□ -1.02
SF3A3-206ENST00000487062 G3BP1Q13283 466 aaKnown RBP eCLIP8.68□□□□□ -1.02
SF3A3-206ENST00000487062 TTC22Q5TAA0 569 aa8.68□□□□□ -1.02
SF3A3-206ENST00000487062 ZNF772Q68DY9 489 aaPredicted RBP8.68□□□□□ -1.02
SF3A3-206ENST00000487062 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.68□□□□□ -1.02
SF3A3-206ENST00000487062 DZIP3Q86Y13 1208 aaKnown RBP8.68□□□□□ -1.02
SF3A3-206ENST00000487062 SEPT12Q8IYM1 358 aa8.68□□□□□ -1.02
SF3A3-206ENST00000487062 RHPN1Q8TCX5 695 aa8.68□□□□□ -1.02
SF3A3-206ENST00000487062 BCL11AQ9H165 835 aa8.68□□□□□ -1.02
SF3A3-206ENST00000487062 OSBPL3Q9H4L5 887 aa8.68□□□□□ -1.02
SF3A3-206ENST00000487062 LY75O60449 1722 aa8.68□□□□□ -1.02
SF3A3-206ENST00000487062 MYH3P11055 1940 aa8.68□□□□□ -1.02
SF3A3-206ENST00000487062 AK9Q5TCS8 1911 aa8.68□□□□□ -1.02
SF3A3-206ENST00000487062 MYH14Q7Z406 1995 aaKnown RBP8.68□□□□□ -1.02
SF3A3-206ENST00000487062 PCCAP05165 728 aaPredicted RBP8.67□□□□□ -1.02
SF3A3-206ENST00000487062 EIF5P55010 431 aaKnown RBP8.67□□□□□ -1.02
SF3A3-206ENST00000487062 CASP7P55210 303 aa8.67□□□□□ -1.02
SF3A3-206ENST00000487062 AOX1Q06278 1338 aa8.67□□□□□ -1.02
SF3A3-206ENST00000487062 ITPK1Q13572 414 aa8.67□□□□□ -1.02
SF3A3-206ENST00000487062 RABL6Q3YEC7 729 aaPredicted RBP8.67□□□□□ -1.02
SF3A3-206ENST00000487062 INTS5Q6P9B9 1019 aaKnown RBP8.67□□□□□ -1.02
SF3A3-206ENST00000487062 BRWD3Q6RI45 1802 aa8.67□□□□□ -1.02
SF3A3-206ENST00000487062 BCORQ6W2J9 1755 aa8.67□□□□□ -1.02
SF3A3-206ENST00000487062 C16orf71Q8IYS4 520 aaPredicted RBP8.67□□□□□ -1.02
SF3A3-206ENST00000487062 TAF1LQ8IZX4 1826 aa8.67□□□□□ -1.02
SF3A3-206ENST00000487062 KAZALD1Q96I82 304 aa8.67□□□□□ -1.02
SF3A3-206ENST00000487062 CDC45O75419 566 aa8.66□□□□□ -1.02
SF3A3-206ENST00000487062 MX1P20591 662 aa8.66□□□□□ -1.02
SF3A3-206ENST00000487062 HMGB2P26583 209 aaKnown RBP8.66□□□□□ -1.02
SF3A3-206ENST00000487062 PDE1AP54750 535 aa8.66□□□□□ -1.02
SF3A3-206ENST00000487062 DCAF8Q5TAQ9 597 aa8.66□□□□□ -1.02
SF3A3-206ENST00000487062 RC3H1Q5TC82 1133 aaKnown RBP8.66□□□□□ -1.02
SF3A3-206ENST00000487062 CASC1Q6TDU7 716 aa8.66□□□□□ -1.02
SF3A3-206ENST00000487062 CLASRPQ8N2M8 674 aaKnown RBP8.66□□□□□ -1.02
SF3A3-206ENST00000487062 DDRGK1Q96HY6 314 aa8.66□□□□□ -1.02
SF3A3-206ENST00000487062 GPATCH3Q96I76 525 aa8.66□□□□□ -1.02
SF3A3-206ENST00000487062 TUBGCP6Q96RT7 1819 aa8.66□□□□□ -1.02
SF3A3-206ENST00000487062 SALL3Q9BXA9 1300 aa8.65□□□□□ -1.02
SF3A3-206ENST00000487062 CDHR2Q9BYE9 1310 aa8.65□□□□□ -1.02
SF3A3-206ENST00000487062 CNTNAP4Q9C0A0 1308 aa8.65□□□□□ -1.02
SF3A3-206ENST00000487062 HSP90B1P14625 803 aaKnown RBP8.65□□□□□ -1.02
SF3A3-206ENST00000487062 RBM6P78332 1123 aaKnown RBP8.65□□□□□ -1.02
SF3A3-206ENST00000487062 HLFQ16534 295 aa8.65□□□□□ -1.02
SF3A3-206ENST00000487062 EPHA10Q5JZY3 1008 aa8.65□□□□□ -1.02
SF3A3-206ENST00000487062 LMBR1LQ6UX01 489 aa8.65□□□□□ -1.02
SF3A3-206ENST00000487062 FAM196AQ6ZSG2 479 aa8.65□□□□□ -1.02
SF3A3-206ENST00000487062 KRT27Q7Z3Y8 459 aa8.65□□□□□ -1.02
SF3A3-206ENST00000487062 ZBTB38Q8NAP3 1195 aaPredicted RBP8.65□□□□□ -1.02
SF3A3-206ENST00000487062 KCNV2Q8TDN2 545 aa8.65□□□□□ -1.02
SF3A3-206ENST00000487062 JARID2Q92833 1246 aaPredicted RBP8.65□□□□□ -1.02
SF3A3-206ENST00000487062 BCL11BQ9C0K0 894 aaPredicted RBP8.65□□□□□ -1.02
SF3A3-206ENST00000487062 IL1RAPL2Q9NP60 686 aa8.65□□□□□ -1.02
SF3A3-206ENST00000487062 COPRSQ9NQ92 184 aa8.65□□□□□ -1.02
SF3A3-206ENST00000487062 STAP2Q9UGK3 403 aa8.65□□□□□ -1.02
SF3A3-206ENST00000487062 TBC1D2BQ9UPU7 963 aa8.65□□□□□ -1.02
SF3A3-206ENST00000487062 PA2G4Q9UQ80 394 aaKnown RBP8.65□□□□□ -1.02
SF3A3-206ENST00000487062 ZNF652Q9Y2D9 606 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms