RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 DNMT3AQ9Y6K1 912 aaPredicted RBP8.69□□□□□ -1.02
COPS3-209ENST00000486810 OXCT2Q9BYC2 517 aaPredicted RBP8.68□□□□□ -1.02
COPS3-209ENST00000486810 BRD2P25440 801 aaKnown RBP8.67□□□□□ -1.02
COPS3-209ENST00000486810 MTMR3Q13615 1198 aa8.67□□□□□ -1.02
COPS3-209ENST00000486810 RAB44Q7Z6P3 723 aaPredicted RBP8.67□□□□□ -1.02
COPS3-209ENST00000486810 GTF3C2Q8WUA4 911 aaPredicted RBP8.67□□□□□ -1.02
COPS3-209ENST00000486810 NSFL1CQ9UNZ2 370 aaKnown RBP8.67□□□□□ -1.02
COPS3-209ENST00000486810 ARAFP10398 606 aa8.66□□□□□ -1.02
COPS3-209ENST00000486810 ARSDP51689 593 aa8.66□□□□□ -1.02
COPS3-209ENST00000486810 SPEM2Q0P670 501 aa8.66□□□□□ -1.02
COPS3-209ENST00000486810 ZNF468Q5VIY5 522 aaPredicted RBP8.66□□□□□ -1.02
COPS3-209ENST00000486810 HELQQ8TDG4 1101 aa8.66□□□□□ -1.02
COPS3-209ENST00000486810 STIM2Q9P246 746 aa8.66□□□□□ -1.02
COPS3-209ENST00000486810 GGA1Q9UJY5 639 aa8.66□□□□□ -1.02
COPS3-209ENST00000486810 BCRP11274 1271 aa8.65□□□□□ -1.02
COPS3-209ENST00000486810 PCBP4P57723 403 aaKnown RBP8.65□□□□□ -1.02
COPS3-209ENST00000486810 FCHSD1Q86WN1 690 aa8.65□□□□□ -1.02
COPS3-209ENST00000486810 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
COPS3-209ENST00000486810 MDFIQ99750 246 aa8.65□□□□□ -1.02
COPS3-209ENST00000486810 GSX2Q9BZM3 304 aa8.65□□□□□ -1.02
COPS3-209ENST00000486810 NEURL1BA8MQ27 555 aa8.64□□□□□ -1.03
COPS3-209ENST00000486810 SHISA8B8ZZ34 492 aa8.64□□□□□ -1.03
COPS3-209ENST00000486810 OIP5O43482 229 aa8.64□□□□□ -1.03
COPS3-209ENST00000486810 SYT9Q86SS6 491 aa8.64□□□□□ -1.03
COPS3-209ENST00000486810 TXNDC2Q86VQ3 553 aa8.64□□□□□ -1.03
COPS3-209ENST00000486810 AVENQ9NQS1 362 aaPredicted RBP8.64□□□□□ -1.03
COPS3-209ENST00000486810 KCNMB2Q9Y691 235 aa8.64□□□□□ -1.03
COPS3-209ENST00000486810 SERPINB4P48594 390 aa8.63□□□□□ -1.03
COPS3-209ENST00000486810 SLCO4C1Q6ZQN7 724 aa8.63□□□□□ -1.03
COPS3-209ENST00000486810 BCL11AQ9H165 835 aa8.63□□□□□ -1.03
COPS3-209ENST00000486810 ANO2Q9NQ90 1003 aa8.63□□□□□ -1.03
COPS3-209ENST00000486810 RTCBQ9Y3I0 505 aaKnown RBP8.63□□□□□ -1.03
COPS3-209ENST00000486810 MPSTP25325 297 aa8.62□□□□□ -1.03
COPS3-209ENST00000486810 ZAP70P43403 619 aa8.62□□□□□ -1.03
COPS3-209ENST00000486810 ZNF211Q13398 564 aaPredicted RBP8.62□□□□□ -1.03
COPS3-209ENST00000486810 TRIP4Q15650 581 aaPredicted RBP8.62□□□□□ -1.03
COPS3-209ENST00000486810 ECM1Q16610 540 aa8.62□□□□□ -1.03
COPS3-209ENST00000486810 ATCAYQ86WG3 371 aa8.62□□□□□ -1.03
COPS3-209ENST00000486810 RGL4Q8IZJ4 473 aa8.62□□□□□ -1.03
COPS3-209ENST00000486810 GOLGA6L1Q8N7Z2 621 aa8.62□□□□□ -1.03
COPS3-209ENST00000486810 STK17AQ9UEE5 414 aa8.62□□□□□ -1.03
COPS3-209ENST00000486810 GDF2Q9UK05 429 aaPredicted RBP8.62□□□□□ -1.03
COPS3-209ENST00000486810 PRR12Q9ULL5 1215 aa8.62□□□□□ -1.03
COPS3-209ENST00000486810 NPR3P17342 541 aa8.61□□□□□ -1.03
COPS3-209ENST00000486810 ADH6P28332 368 aa8.61□□□□□ -1.03
COPS3-209ENST00000486810 GALNT6Q8NCL4 622 aa8.61□□□□□ -1.03
COPS3-209ENST00000486810 EDARADDQ8WWZ3 215 aa8.61□□□□□ -1.03
COPS3-209ENST00000486810 LRRC4BQ9NT99 713 aa8.61□□□□□ -1.03
COPS3-209ENST00000486810 ZFATQ9P243 1243 aa8.61□□□□□ -1.03
COPS3-209ENST00000486810 ADAMTS8Q9UP79 889 aa8.61□□□□□ -1.03
COPS3-209ENST00000486810 EPXP11678 715 aa8.6□□□□□ -1.03
COPS3-209ENST00000486810 HOXB4P17483 251 aaPredicted RBP8.6□□□□□ -1.03
COPS3-209ENST00000486810 ARID4AP29374 1257 aaPredicted RBP8.6□□□□□ -1.03
COPS3-209ENST00000486810 PDE4CQ08493 712 aa8.6□□□□□ -1.03
COPS3-209ENST00000486810 CCINQ13939 588 aa8.6□□□□□ -1.03
COPS3-209ENST00000486810 B4GALNT3Q6L9W6 998 aa8.6□□□□□ -1.03
COPS3-209ENST00000486810 BHMTQ93088 406 aa8.6□□□□□ -1.03
COPS3-209ENST00000486810 SIN3BO75182 1162 aa8.59□□□□□ -1.03
COPS3-209ENST00000486810 ABL1P00519 1130 aa8.59□□□□□ -1.03
COPS3-209ENST00000486810 EGFRP00533 1210 aa8.59□□□□□ -1.03
COPS3-209ENST00000486810 EPB42P16452 691 aa8.59□□□□□ -1.03
COPS3-209ENST00000486810 TARSP26639 723 aaKnown RBP8.59□□□□□ -1.03
COPS3-209ENST00000486810 CMTR1Q8N1G2 835 aaKnown RBP8.59□□□□□ -1.03
COPS3-209ENST00000486810 ABTB2Q8N961 1025 aa8.59□□□□□ -1.03
COPS3-209ENST00000486810 TNFRSF25Q93038 417 aa8.59□□□□□ -1.03
COPS3-209ENST00000486810 SASH3O75995 380 aa8.58□□□□□ -1.04
COPS3-209ENST00000486810 NFKB1P19838 968 aa8.58□□□□□ -1.04
COPS3-209ENST00000486810 EIF1AXP47813 144 aaKnown RBP8.58□□□□□ -1.04
COPS3-209ENST00000486810 FKBP4Q02790 459 aaKnown RBP eCLIP8.58□□□□□ -1.04
COPS3-209ENST00000486810 KRT25Q7Z3Z0 450 aa8.58□□□□□ -1.04
COPS3-209ENST00000486810 GPR152Q8TDT2 470 aa8.58□□□□□ -1.04
COPS3-209ENST00000486810 TRAIPQ9BWF2 469 aa8.58□□□□□ -1.04
COPS3-209ENST00000486810 C11orf16Q9NQ32 467 aa8.58□□□□□ -1.04
COPS3-209ENST00000486810 ADARB2-AS1A8MUL3 147 aa8.57□□□□□ -1.04
COPS3-209ENST00000486810 ICMTO60725 284 aa8.57□□□□□ -1.04
COPS3-209ENST00000486810 EIF5BO60841 1220 aaKnown RBP8.57□□□□□ -1.04
COPS3-209ENST00000486810 XYLBO75191 536 aa8.57□□□□□ -1.04
COPS3-209ENST00000486810 BRD1O95696 1058 aa8.57□□□□□ -1.04
COPS3-209ENST00000486810 MAP3K10Q02779 954 aa8.57□□□□□ -1.04
COPS3-209ENST00000486810 NOM1Q5C9Z4 860 aaKnown RBP8.57□□□□□ -1.04
COPS3-209ENST00000486810 BTBD6Q96KE9 485 aa8.57□□□□□ -1.04
COPS3-209ENST00000486810 EGFL7Q9UHF1 273 aa8.57□□□□□ -1.04
COPS3-209ENST00000486810 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.57□□□□□ -1.04
COPS3-209ENST00000486810 MTMR7Q9Y216 660 aa8.56□□□□□ -1.04
COPS3-209ENST00000486810 ELOA3CA0A087WX78 387 aaPredicted RBP8.55□□□□□ -1.04
COPS3-209ENST00000486810 ELOA3DA6NLF2 546 aaPredicted RBP8.55□□□□□ -1.04
COPS3-209ENST00000486810 FZD6O60353 706 aa8.55□□□□□ -1.04
COPS3-209ENST00000486810 SNRPNP63162 240 aaKnown RBP8.55□□□□□ -1.04
COPS3-209ENST00000486810 SF3B2Q13435 895 aaKnown RBP8.55□□□□□ -1.04
COPS3-209ENST00000486810 ELOA3BQ3SY89 546 aa8.55□□□□□ -1.04
COPS3-209ENST00000486810 ELOA3Q8NG57 546 aa8.55□□□□□ -1.04
COPS3-209ENST00000486810 EDEM1Q92611 657 aa8.55□□□□□ -1.04
COPS3-209ENST00000486810 EFCC1Q9HA90 598 aa8.55□□□□□ -1.04
COPS3-209ENST00000486810 GNEQ9Y223 722 aaKnown RBP8.55□□□□□ -1.04
COPS3-209ENST00000486810 STARD13Q9Y3M8 1113 aa8.55□□□□□ -1.04
COPS3-209ENST00000486810 ZBTB42B2RXF5 422 aa8.54□□□□□ -1.04
COPS3-209ENST00000486810 PDGFAP04085 211 aa8.54□□□□□ -1.04
COPS3-209ENST00000486810 CHSY3Q70JA7 882 aa8.54□□□□□ -1.04
COPS3-209ENST00000486810 NEDD1Q8NHV4 660 aa8.54□□□□□ -1.04
COPS3-209ENST00000486810 PIK3R5Q8WYR1 880 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms