RNA–Protein interactions for RNA: ENST00000485508.5

GABBR1-213, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-213ENST00000485508 G2E3Q7L622 706 aa28.49■■■□□ 2.15
GABBR1-213ENST00000485508 KLRG2A4D1S0 409 aaPredicted RBP28.48■■■□□ 2.15
GABBR1-213ENST00000485508 DDX58O95786 925 aaKnown RBP28.48■■■□□ 2.15
GABBR1-213ENST00000485508 UTP14AQ9BVJ6 771 aaKnown RBP28.48■■■□□ 2.15
GABBR1-213ENST00000485508 RNF123Q5XPI4 1314 aa28.47■■■□□ 2.15
GABBR1-213ENST00000485508 SRGNP10124 158 aa28.47■■■□□ 2.15
GABBR1-213ENST00000485508 TRMT2AQ8IZ69 625 aaKnown RBP28.47■■■□□ 2.15
GABBR1-213ENST00000485508 ATP5J2-PTCD1G3V325 749 aa28.46■■■□□ 2.15
GABBR1-213ENST00000485508 TTLL6Q8N841 843 aa28.46■■■□□ 2.15
GABBR1-213ENST00000485508 ZNF622Q969S3 477 aaKnown RBP eCLIP28.46■■■□□ 2.152e-7■□□□□ 11.3
GABBR1-213ENST00000485508 LAMB2P55268 1798 aa28.46■■■□□ 2.15
GABBR1-213ENST00000485508 TRIM28Q13263 835 aaKnown RBP28.45■■■□□ 2.14
GABBR1-213ENST00000485508 STYK1Q6J9G0 422 aa28.45■■■□□ 2.14
GABBR1-213ENST00000485508 KSR2Q6VAB6 950 aa28.45■■■□□ 2.14
GABBR1-213ENST00000485508 MASTLQ96GX5 879 aa28.45■■■□□ 2.14
GABBR1-213ENST00000485508 ADCY9O60503 1353 aa28.45■■■□□ 2.14
GABBR1-213ENST00000485508 SLX4Q8IY92 1834 aa28.45■■■□□ 2.14
GABBR1-213ENST00000485508 FLIIQ13045 1269 aa28.44■■■□□ 2.14
GABBR1-213ENST00000485508 DDX60Q8IY21 1712 aaKnown RBP28.43■■■□□ 2.14
GABBR1-213ENST00000485508 PI4KAP2A4QPH2 592 aa28.43■■■□□ 2.14
GABBR1-213ENST00000485508 SLC10A5Q5PT55 438 aa28.43■■■□□ 2.14
GABBR1-213ENST00000485508 PI4KAP1Q8N8J0 262 aa28.43■■■□□ 2.14
GABBR1-213ENST00000485508 MYD88Q99836 296 aa28.43■■■□□ 2.14
GABBR1-213ENST00000485508 METTL22Q9BUU2 404 aaPredicted RBP28.43■■■□□ 2.14
GABBR1-213ENST00000485508 MAP3K2Q9Y2U5 619 aa28.43■■■□□ 2.14
GABBR1-213ENST00000485508 NPR1P16066 1061 aa28.42■■■□□ 2.14
GABBR1-213ENST00000485508 HNRNPUQ00839 825 aaKnown RBP eCLIP28.42■■■□□ 2.14
GABBR1-213ENST00000485508 CRY2Q49AN0 593 aa28.42■■■□□ 2.14
GABBR1-213ENST00000485508 TRMT112Q9UI30 125 aaKnown RBP28.42■■■□□ 2.14
GABBR1-213ENST00000485508 YY1P25490 414 aa28.41■■■□□ 2.14
GABBR1-213ENST00000485508 CNKSR1Q969H4 720 aa28.41■■■□□ 2.14
GABBR1-213ENST00000485508 SH3TC1Q8TE82 1336 aa28.41■■■□□ 2.14
GABBR1-213ENST00000485508 ZNF428Q96B54 188 aa28.4■■■□□ 2.14
GABBR1-213ENST00000485508 FKBP5Q13451 457 aaPredicted RBP28.39■■■□□ 2.14
GABBR1-213ENST00000485508 SYNE4Q8N205 404 aa28.39■■■□□ 2.14
GABBR1-213ENST00000485508 ARHGAP27Q6ZUM4 889 aa28.38■■■□□ 2.13
GABBR1-213ENST00000485508 C3orf67Q6ZVT6 689 aa28.38■■■□□ 2.13
GABBR1-213ENST00000485508 SBF1O95248 1867 aa28.38■■■□□ 2.13
GABBR1-213ENST00000485508 PRPF40BQ6NWY9 871 aaKnown RBP28.37■■■□□ 2.13
GABBR1-213ENST00000485508 CCDC191Q8NCU4 936 aa28.37■■■□□ 2.13
GABBR1-213ENST00000485508 NLRP3Q96P20 1036 aa28.37■■■□□ 2.13
GABBR1-213ENST00000485508 FER1L6Q2WGJ9 1857 aa28.37■■■□□ 2.13
GABBR1-213ENST00000485508 HCLS1P14317 486 aaPredicted RBP28.35■■■□□ 2.13
GABBR1-213ENST00000485508 FAM89AQ96GI7 184 aa28.35■■■□□ 2.13
GABBR1-213ENST00000485508 CWC25Q9NXE8 425 aaPredicted RBP28.35■■■□□ 2.13
GABBR1-213ENST00000485508 IGKV5-2P06315 115 aa28.34■■■□□ 2.13
GABBR1-213ENST00000485508 HOXA10P31260 410 aaPredicted RBP28.34■■■□□ 2.13
GABBR1-213ENST00000485508 NEXNQ0ZGT2 675 aa28.34■■■□□ 2.13
GABBR1-213ENST00000485508 DNAAF4Q8WXU2 420 aa28.34■■■□□ 2.13
GABBR1-213ENST00000485508 CCDC88AQ3V6T2 1871 aa28.34■■■□□ 2.13
GABBR1-213ENST00000485508 MRPL50Q8N5N7 158 aaKnown RBP28.33■■■□□ 2.13
GABBR1-213ENST00000485508 ZBTB38Q8NAP3 1195 aaPredicted RBP28.33■■■□□ 2.13
GABBR1-213ENST00000485508 RPGRQ92834 1020 aaKnown RBP28.33■■■□□ 2.13
GABBR1-213ENST00000485508 C21orf2O43822 256 aa28.32■■■□□ 2.12
GABBR1-213ENST00000485508 CT47B1P0C2W7 299 aaPredicted RBP28.32■■■□□ 2.12
GABBR1-213ENST00000485508 ALDH1B1P30837 517 aa28.32■■■□□ 2.12
GABBR1-213ENST00000485508 ZNF219Q9P2Y4 722 aaPredicted RBP28.32■■■□□ 2.12
GABBR1-213ENST00000485508 PCCAP05165 728 aaPredicted RBP28.31■■■□□ 2.12
GABBR1-213ENST00000485508 RTL5Q5HYW3 569 aaPredicted RBP28.31■■■□□ 2.12
GABBR1-213ENST00000485508 C7orf43Q8WVR3 580 aa28.31■■■□□ 2.12
GABBR1-213ENST00000485508 SSH1Q8WYL5 1049 aa28.31■■■□□ 2.12
GABBR1-213ENST00000485508 TAF1P21675 1872 aa28.3■■■□□ 2.12
GABBR1-213ENST00000485508 ZBED9Q6R2W3 1325 aa28.3■■■□□ 2.12
GABBR1-213ENST00000485508 NEURL1BA8MQ27 555 aa28.3■■■□□ 2.12
GABBR1-213ENST00000485508 CWF19L2Q2TBE0 894 aaKnown RBP28.3■■■□□ 2.12
GABBR1-213ENST00000485508 RBM17Q96I25 401 aaKnown RBP28.3■■■□□ 2.12
GABBR1-213ENST00000485508 CRAMP1Q96RY5 1269 aa28.3■■■□□ 2.12
GABBR1-213ENST00000485508 F6X3S4 739 aa28.29■■■□□ 2.12
GABBR1-213ENST00000485508 IRS4O14654 1257 aaPredicted RBP28.29■■■□□ 2.12
GABBR1-213ENST00000485508 ALDH1L2Q3SY69 923 aa28.29■■■□□ 2.12
GABBR1-213ENST00000485508 MYH3P11055 1940 aa28.29■■■□□ 2.12
GABBR1-213ENST00000485508 NFKBIEO00221 500 aa28.28■■■□□ 2.12
GABBR1-213ENST00000485508 LINS1Q8NG48 757 aa28.28■■■□□ 2.12
GABBR1-213ENST00000485508 RASSF7Q02833 373 aa28.27■■■□□ 2.12
GABBR1-213ENST00000485508 SOGA3Q5TF21 947 aa28.27■■■□□ 2.12
GABBR1-213ENST00000485508 CDHR2Q9BYE9 1310 aa28.26■■■□□ 2.11
GABBR1-213ENST00000485508 SF3B3Q15393 1217 aaKnown RBP28.26■■■□□ 2.11
GABBR1-213ENST00000485508 JARID2Q92833 1246 aaPredicted RBP28.26■■■□□ 2.11
GABBR1-213ENST00000485508 BCL2L13Q9BXK5 485 aa28.26■■■□□ 2.11
GABBR1-213ENST00000485508 DICER1Q9UPY3 1922 aaKnown RBP28.26■■■□□ 2.11
GABBR1-213ENST00000485508 ABCC4O15439 1325 aa28.25■■■□□ 2.11
GABBR1-213ENST00000485508 GCKRQ14397 625 aa28.24■■■□□ 2.11
GABBR1-213ENST00000485508 CCDC93Q567U6 631 aa28.24■■■□□ 2.11
GABBR1-213ENST00000485508 BEND3Q5T5X7 828 aa28.24■■■□□ 2.11
GABBR1-213ENST00000485508 PTPRCP08575 1304 aa28.23■■■□□ 2.11
GABBR1-213ENST00000485508 HSP90B1P14625 803 aaKnown RBP28.23■■■□□ 2.11
GABBR1-213ENST00000485508 PRELPP51888 382 aa28.23■■■□□ 2.11
GABBR1-213ENST00000485508 C9orf131Q5VYM1 1079 aa28.23■■■□□ 2.11
GABBR1-213ENST00000485508 OLFM4Q6UX06 510 aa28.23■■■□□ 2.11
GABBR1-213ENST00000485508 SMC4Q9NTJ3 1288 aa28.23■■■□□ 2.11
GABBR1-213ENST00000485508 SNED1Q8TER0 1413 aa28.23■■■□□ 2.11
GABBR1-213ENST00000485508 LTBP3Q9NS15 1303 aa28.22■■■□□ 2.11
GABBR1-213ENST00000485508 H7C1W4 665 aa28.22■■■□□ 2.11
GABBR1-213ENST00000485508 DDX46Q7L014 1031 aaKnown RBP28.22■■■□□ 2.11
GABBR1-213ENST00000485508 PPEF1O14829 653 aaPredicted RBP28.21■■■□□ 2.11
GABBR1-213ENST00000485508 PDE8AO60658 829 aa28.21■■■□□ 2.11
GABBR1-213ENST00000485508 ZNF784Q8NCA9 323 aaPredicted RBP28.21■■■□□ 2.11
GABBR1-213ENST00000485508 TIAM2Q8IVF5 1701 aa28.21■■■□□ 2.11
GABBR1-213ENST00000485508 COL4A1P02462 1669 aa28.2■■■□□ 2.11
GABBR1-213ENST00000485508 TAOK3Q9H2K8 898 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms