RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 SYNE4Q8N205 404 aa17.86■□□□□ 0.45
SRSF6-202ENST00000483871 CWC25Q9NXE8 425 aaPredicted RBP17.86■□□□□ 0.45
SRSF6-202ENST00000483871 ANKRD36CQ5JPF3 1778 aa17.85■□□□□ 0.45
SRSF6-202ENST00000483871 CASZ1Q86V15 1759 aa17.85■□□□□ 0.45
SRSF6-202ENST00000483871 ALDH1L1O75891 902 aa17.85■□□□□ 0.45
SRSF6-202ENST00000483871 MMP10P09238 476 aa17.85■□□□□ 0.45
SRSF6-202ENST00000483871 PXDNLA1KZ92 1463 aa17.84■□□□□ 0.45
SRSF6-202ENST00000483871 POLRMTO00411 1230 aaKnown RBP17.84■□□□□ 0.45
SRSF6-202ENST00000483871 MVPQ14764 893 aaKnown RBP17.84■□□□□ 0.45
SRSF6-202ENST00000483871 PARP10Q53GL7 1025 aa17.84■□□□□ 0.45
SRSF6-202ENST00000483871 NUTM1Q86Y26 1132 aa17.84■□□□□ 0.45
SRSF6-202ENST00000483871 CCDC24Q8N4L8 307 aa17.84■□□□□ 0.45
SRSF6-202ENST00000483871 FAM89AQ96GI7 184 aa17.84■□□□□ 0.45
SRSF6-202ENST00000483871 USP44Q9H0E7 712 aa17.84■□□□□ 0.45
SRSF6-202ENST00000483871 AFDNP55196 1824 aaKnown RBP17.84■□□□□ 0.45
SRSF6-202ENST00000483871 SERPINB2P05120 415 aa17.83■□□□□ 0.45
SRSF6-202ENST00000483871 NBPF7P0C2Y1 421 aaPredicted RBP17.83■□□□□ 0.45
SRSF6-202ENST00000483871 CRBNQ96SW2 442 aa17.83■□□□□ 0.45
SRSF6-202ENST00000483871 MEIS3Q99687 375 aa17.83■□□□□ 0.45
SRSF6-202ENST00000483871 TRMT112Q9UI30 125 aaKnown RBP17.83■□□□□ 0.45
SRSF6-202ENST00000483871 ZBTB7BO15156 539 aaPredicted RBP17.83■□□□□ 0.44
SRSF6-202ENST00000483871 NTSR2O95665 410 aa17.83■□□□□ 0.44
SRSF6-202ENST00000483871 PPP1R42Q7Z4L9 355 aa17.83■□□□□ 0.44
SRSF6-202ENST00000483871 UTP14AQ9BVJ6 771 aaKnown RBP17.83■□□□□ 0.44
SRSF6-202ENST00000483871 MTFR1LQ9H019 292 aa17.83■□□□□ 0.44
SRSF6-202ENST00000483871 C9orf78Q9NZ63 289 aaPredicted RBP17.83■□□□□ 0.44
SRSF6-202ENST00000483871 GRM8O00222 908 aa17.82■□□□□ 0.44
SRSF6-202ENST00000483871 NBPF5PQ86XG9 351 aaPredicted RBP17.82■□□□□ 0.44
SRSF6-202ENST00000483871 CARMIL3Q8ND23 1372 aa17.82■□□□□ 0.44
SRSF6-202ENST00000483871 H7C1W4 665 aa17.81■□□□□ 0.44
SRSF6-202ENST00000483871 UBE3BQ7Z3V4 1068 aa17.81■□□□□ 0.44
SRSF6-202ENST00000483871 ZBTB38Q8NAP3 1195 aaPredicted RBP17.81■□□□□ 0.44
SRSF6-202ENST00000483871 PARP3Q9Y6F1 533 aa17.81■□□□□ 0.44
SRSF6-202ENST00000483871 SRCAPQ6ZRS2 3230 aa17.81■□□□□ 0.44
SRSF6-202ENST00000483871 ERFEQ4G0M1 354 aa17.8■□□□□ 0.44
SRSF6-202ENST00000483871 TPTE2Q6XPS3 522 aa17.8■□□□□ 0.44
SRSF6-202ENST00000483871 PCCAP05165 728 aaPredicted RBP17.8■□□□□ 0.44
SRSF6-202ENST00000483871 GTF2E1P29083 439 aaPredicted RBP17.8■□□□□ 0.44
SRSF6-202ENST00000483871 CASP7P55210 303 aa17.8■□□□□ 0.44
SRSF6-202ENST00000483871 PRR5LQ6MZQ0 368 aa17.8■□□□□ 0.44
SRSF6-202ENST00000483871 EXOC6Q8TAG9 804 aa17.8■□□□□ 0.44
SRSF6-202ENST00000483871 DDX19BQ9UMR2 479 aa17.8■□□□□ 0.44
SRSF6-202ENST00000483871 NPHP1O15259 732 aa17.79■□□□□ 0.44
SRSF6-202ENST00000483871 NYXQ9GZU5 481 aa17.79■□□□□ 0.44
SRSF6-202ENST00000483871 N4BP2Q86UW6 1770 aaPredicted RBP17.79■□□□□ 0.44
SRSF6-202ENST00000483871 SH3TC1Q8TE82 1336 aa17.78■□□□□ 0.44
SRSF6-202ENST00000483871 HCLS1P14317 486 aaPredicted RBP17.78■□□□□ 0.44
SRSF6-202ENST00000483871 CNBD1Q8NA66 436 aa17.78■□□□□ 0.44
SRSF6-202ENST00000483871 SGIP1Q9BQI5 828 aa17.78■□□□□ 0.44
SRSF6-202ENST00000483871 COL24A1Q17RW2 1714 aa17.78■□□□□ 0.44
SRSF6-202ENST00000483871 UTYO14607 1347 aa17.78■□□□□ 0.44
SRSF6-202ENST00000483871 IRS4O14654 1257 aaPredicted RBP17.77■□□□□ 0.44
SRSF6-202ENST00000483871 UBTFL1P0CB47 393 aaPredicted RBP17.77■□□□□ 0.44
SRSF6-202ENST00000483871 PTGER2P43116 358 aa17.77■□□□□ 0.44
SRSF6-202ENST00000483871 SUCLG2Q96I99 432 aa17.77■□□□□ 0.44
SRSF6-202ENST00000483871 C1orf115Q9H7X2 142 aa17.77■□□□□ 0.44
SRSF6-202ENST00000483871 KAZALD1Q96I82 304 aa17.77■□□□□ 0.43
SRSF6-202ENST00000483871 ABCC12Q96J65 1359 aa17.77■□□□□ 0.43
SRSF6-202ENST00000483871 EPHA10Q5JZY3 1008 aa17.76■□□□□ 0.43
SRSF6-202ENST00000483871 ZBTB40Q9NUA8 1239 aa17.76■□□□□ 0.43
SRSF6-202ENST00000483871 IBTKQ9P2D0 1353 aaPredicted RBP17.75■□□□□ 0.43
SRSF6-202ENST00000483871 GNAI3P08754 354 aa17.75■□□□□ 0.43
SRSF6-202ENST00000483871 POLD1P28340 1107 aa17.75■□□□□ 0.43
SRSF6-202ENST00000483871 SPON1Q9HCB6 807 aa17.75■□□□□ 0.43
SRSF6-202ENST00000483871 LRRFIP2Q9Y608 721 aaKnown RBP17.75■□□□□ 0.43
SRSF6-202ENST00000483871 C3orf67Q6ZVT6 689 aa17.74■□□□□ 0.43
SRSF6-202ENST00000483871 CDHR2Q9BYE9 1310 aa17.74■□□□□ 0.43
SRSF6-202ENST00000483871 ST5P78524 1137 aa17.74■□□□□ 0.43
SRSF6-202ENST00000483871 FOXO4P98177 505 aa17.74■□□□□ 0.43
SRSF6-202ENST00000483871 SLC10A5Q5PT55 438 aa17.74■□□□□ 0.43
SRSF6-202ENST00000483871 CCDC85AQ96PX6 553 aaPredicted RBP17.74■□□□□ 0.43
SRSF6-202ENST00000483871 BICC1Q9H694 974 aaKnown RBP17.74■□□□□ 0.43
SRSF6-202ENST00000483871 NRXN2Q9P2S2 1712 aa17.73■□□□□ 0.43
SRSF6-202ENST00000483871 GNAI2P04899 355 aa17.73■□□□□ 0.43
SRSF6-202ENST00000483871 PDE8AO60658 829 aa17.72■□□□□ 0.43
SRSF6-202ENST00000483871 NEFLP07196 543 aa17.71■□□□□ 0.43
SRSF6-202ENST00000483871 NLRP3Q96P20 1036 aa17.71■□□□□ 0.43
SRSF6-202ENST00000483871 PLA2G12BQ9BX93 195 aa17.71■□□□□ 0.43
SRSF6-202ENST00000483871 DDX60Q8IY21 1712 aaKnown RBP17.71■□□□□ 0.43
SRSF6-202ENST00000483871 GOLGB1Q14789 3259 aaKnown RBP17.71■□□□□ 0.43
SRSF6-202ENST00000483871 LMBR1LQ6UX01 489 aa17.71■□□□□ 0.42
SRSF6-202ENST00000483871 ANKRD44Q8N8A2 993 aa17.71■□□□□ 0.42
SRSF6-202ENST00000483871 BRIP1Q9BX63 1249 aa17.71■□□□□ 0.42
SRSF6-202ENST00000483871 CTSWP56202 376 aa17.7■□□□□ 0.42
SRSF6-202ENST00000483871 TTLL11Q8NHH1 800 aa17.7■□□□□ 0.42
SRSF6-202ENST00000483871 CHMP4BQ9H444 224 aaKnown RBP17.7■□□□□ 0.42
SRSF6-202ENST00000483871 PPP1R1BQ9UD71 204 aaPredicted RBP17.7■□□□□ 0.42
SRSF6-202ENST00000483871 CSF1RP07333 972 aa17.69■□□□□ 0.42
SRSF6-202ENST00000483871 KLHL34Q8N239 644 aa17.69■□□□□ 0.42
SRSF6-202ENST00000483871 CHMP3Q9Y3E7 222 aa17.69■□□□□ 0.42
SRSF6-202ENST00000483871 PCDHB15Q9Y5E8 787 aa17.69■□□□□ 0.42
SRSF6-202ENST00000483871 TNRC6CQ9HCJ0 1690 aaKnown RBP17.68■□□□□ 0.42
SRSF6-202ENST00000483871 ANKRD31Q8N7Z5 1873 aa17.68■□□□□ 0.42
SRSF6-202ENST00000483871 PNMA6EA0A0J9YXQ4 647 aa17.67■□□□□ 0.42
SRSF6-202ENST00000483871 SF3B3Q15393 1217 aaKnown RBP17.67■□□□□ 0.42
SRSF6-202ENST00000483871 RABL6Q3YEC7 729 aaPredicted RBP17.67■□□□□ 0.42
SRSF6-202ENST00000483871 GREM2Q9H772 168 aa17.67■□□□□ 0.42
SRSF6-202ENST00000483871 HDAC5Q9UQL6 1122 aa17.67■□□□□ 0.42
SRSF6-202ENST00000483871 HSP90B1P14625 803 aaKnown RBP17.67■□□□□ 0.42
SRSF6-202ENST00000483871 CHRNA5P30532 468 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms