RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 L3MBTL3Q96JM7 780 aaPredicted RBP25.49■■□□□ 1.67
R3HDM1-215ENST00000483021 PCNTO95613 3336 aa25.49■■□□□ 1.67
R3HDM1-215ENST00000483021 IARSP41252 1262 aaKnown RBP25.48■■□□□ 1.67
R3HDM1-215ENST00000483021 GRIPAP1Q4V328 841 aa25.48■■□□□ 1.67
R3HDM1-215ENST00000483021 JMYQ8N9B5 988 aa25.48■■□□□ 1.67
R3HDM1-215ENST00000483021 PSMD1Q99460 953 aa25.48■■□□□ 1.67
R3HDM1-215ENST00000483021 RNF123Q5XPI4 1314 aa25.47■■□□□ 1.67
R3HDM1-215ENST00000483021 HSP90AB3PQ58FF7 597 aa25.47■■□□□ 1.67
R3HDM1-215ENST00000483021 CHL1O00533 1208 aa25.46■■□□□ 1.67
R3HDM1-215ENST00000483021 PROSER3Q2NL68 480 aa25.46■■□□□ 1.67
R3HDM1-215ENST00000483021 CHADLQ6NUI6 762 aa25.46■■□□□ 1.67
R3HDM1-215ENST00000483021 SYNE4Q8N205 404 aa25.46■■□□□ 1.67
R3HDM1-215ENST00000483021 RBM17Q96I25 401 aaKnown RBP25.46■■□□□ 1.67
R3HDM1-215ENST00000483021 CRAMP1Q96RY5 1269 aa25.46■■□□□ 1.67
R3HDM1-215ENST00000483021 UTP14AQ9BVJ6 771 aaKnown RBP25.45■■□□□ 1.66
R3HDM1-215ENST00000483021 TRIM35Q9UPQ4 493 aa25.45■■□□□ 1.66
R3HDM1-215ENST00000483021 LAMB2P55268 1798 aa25.44■■□□□ 1.66
R3HDM1-215ENST00000483021 ZNF541Q9H0D2 1346 aa25.44■■□□□ 1.66
R3HDM1-215ENST00000483021 ANXA1P04083 346 aa25.44■■□□□ 1.66
R3HDM1-215ENST00000483021 NLRP3Q96P20 1036 aa25.44■■□□□ 1.66
R3HDM1-215ENST00000483021 DDX21Q9NR30 783 aaKnown RBP eCLIP25.44■■□□□ 1.66
R3HDM1-215ENST00000483021 COPS6Q7L5N1 327 aa25.43■■□□□ 1.66
R3HDM1-215ENST00000483021 JDP2Q8WYK2 163 aa25.43■■□□□ 1.66
R3HDM1-215ENST00000483021 PRKRIP1Q9H875 184 aaPredicted RBP25.43■■□□□ 1.66
R3HDM1-215ENST00000483021 ADAMTS8Q9UP79 889 aa25.43■■□□□ 1.66
R3HDM1-215ENST00000483021 FZD9O00144 591 aa25.42■■□□□ 1.66
R3HDM1-215ENST00000483021 PPEF1O14829 653 aaPredicted RBP25.42■■□□□ 1.66
R3HDM1-215ENST00000483021 HOXB7P09629 217 aa25.42■■□□□ 1.66
R3HDM1-215ENST00000483021 LDHDQ86WU2 507 aa25.42■■□□□ 1.66
R3HDM1-215ENST00000483021 XAGE3Q8WTP9 111 aa25.42■■□□□ 1.66
R3HDM1-215ENST00000483021 NECTIN2Q92692 538 aa25.42■■□□□ 1.66
R3HDM1-215ENST00000483021 TAF1DQ9H5J8 278 aaPredicted RBP25.42■■□□□ 1.66
R3HDM1-215ENST00000483021 LAS1LQ9Y4W2 734 aaKnown RBP25.42■■□□□ 1.66
R3HDM1-215ENST00000483021 AIMP1Q12904 312 aaKnown RBP25.41■■□□□ 1.66
R3HDM1-215ENST00000483021 SLC10A5Q5PT55 438 aa25.41■■□□□ 1.66
R3HDM1-215ENST00000483021 POTEIP0CG38 1075 aa25.4■■□□□ 1.66
R3HDM1-215ENST00000483021 POTEJP0CG39 1038 aa25.4■■□□□ 1.66
R3HDM1-215ENST00000483021 TMX4Q9H1E5 349 aaPredicted RBP25.4■■□□□ 1.66
R3HDM1-215ENST00000483021 HACL1Q9UJ83 578 aa25.4■■□□□ 1.66
R3HDM1-215ENST00000483021 ADAMTSL1Q8N6G6 1762 aa25.39■■□□□ 1.66
R3HDM1-215ENST00000483021 KRT24Q2M2I5 525 aa25.39■■□□□ 1.66
R3HDM1-215ENST00000483021 GPC2Q8N158 579 aa25.39■■□□□ 1.66
R3HDM1-215ENST00000483021 HDGFL1Q5TGJ6 251 aa25.38■■□□□ 1.65
R3HDM1-215ENST00000483021 C3orf67Q6ZVT6 689 aa25.38■■□□□ 1.65
R3HDM1-215ENST00000483021 NLRP10Q86W26 655 aa25.38■■□□□ 1.65
R3HDM1-215ENST00000483021 CFAP44Q96MT7 982 aa25.38■■□□□ 1.65
R3HDM1-215ENST00000483021 CHPF2Q9P2E5 772 aa25.38■■□□□ 1.65
R3HDM1-215ENST00000483021 EIF6P56537 245 aaKnown RBP25.37■■□□□ 1.65
R3HDM1-215ENST00000483021 TCIRG1Q13488 830 aa25.37■■□□□ 1.65
R3HDM1-215ENST00000483021 CREBZFQ9NS37 354 aa25.37■■□□□ 1.65
R3HDM1-215ENST00000483021 COL4A5P29400 1685 aa25.36■■□□□ 1.65
R3HDM1-215ENST00000483021 PNMA8AQ86V59 439 aaPredicted RBP25.36■■□□□ 1.65
R3HDM1-215ENST00000483021 LARGE2Q8N3Y3 721 aa25.36■■□□□ 1.65
R3HDM1-215ENST00000483021 DBF4Q9UBU7 674 aaPredicted RBP25.36■■□□□ 1.65
R3HDM1-215ENST00000483021 ABCC4O15439 1325 aa25.36■■□□□ 1.65
R3HDM1-215ENST00000483021 EPHX2P34913 555 aa25.35■■□□□ 1.65
R3HDM1-215ENST00000483021 TRMT112Q9UI30 125 aaKnown RBP25.35■■□□□ 1.65
R3HDM1-215ENST00000483021 ATP6V0A2Q9Y487 856 aa25.35■■□□□ 1.65
R3HDM1-215ENST00000483021 SH3TC1Q8TE82 1336 aa25.35■■□□□ 1.65
R3HDM1-215ENST00000483021 EAPPQ56P03 285 aaPredicted RBP25.34■■□□□ 1.65
R3HDM1-215ENST00000483021 PLBD2Q8NHP8 589 aa25.34■■□□□ 1.65
R3HDM1-215ENST00000483021 VPS33BQ9H267 617 aa25.34■■□□□ 1.65
R3HDM1-215ENST00000483021 DDX60Q8IY21 1712 aaKnown RBP25.34■■□□□ 1.65
R3HDM1-215ENST00000483021 PASKQ96RG2 1323 aa25.34■■□□□ 1.65
R3HDM1-215ENST00000483021 TCERG1O14776 1098 aaKnown RBP25.33■■□□□ 1.65
R3HDM1-215ENST00000483021 CALD1Q05682 793 aaKnown RBP25.33■■□□□ 1.65
R3HDM1-215ENST00000483021 BBOX1O75936 387 aa25.32■■□□□ 1.64
R3HDM1-215ENST00000483021 SUPT20HQ8NEM7 779 aa25.32■■□□□ 1.64
R3HDM1-215ENST00000483021 HYPKQ9NX55 129 aa25.32■■□□□ 1.64
R3HDM1-215ENST00000483021 HCLS1P14317 486 aaPredicted RBP25.31■■□□□ 1.64
R3HDM1-215ENST00000483021 LMOD1P29536 600 aaPredicted RBP25.31■■□□□ 1.64
R3HDM1-215ENST00000483021 DUSP27Q5VZP5 1158 aa25.31■■□□□ 1.64
R3HDM1-215ENST00000483021 ANKRD13DQ6ZTN6 518 aa25.31■■□□□ 1.64
R3HDM1-215ENST00000483021 NIM1KQ8IY84 436 aa25.31■■□□□ 1.64
R3HDM1-215ENST00000483021 MBIPQ9NS73 344 aa25.31■■□□□ 1.64
R3HDM1-215ENST00000483021 CLEC11AQ9Y240 323 aa25.31■■□□□ 1.64
R3HDM1-215ENST00000483021 GJA3Q9Y6H8 435 aa25.31■■□□□ 1.64
R3HDM1-215ENST00000483021 LRRC37AA6NMS7 1700 aa25.3■■□□□ 1.64
R3HDM1-215ENST00000483021 PPIP5K2O43314 1243 aa25.3■■□□□ 1.64
R3HDM1-215ENST00000483021 DDX46Q7L014 1031 aaKnown RBP25.3■■□□□ 1.64
R3HDM1-215ENST00000483021 IFT57Q9NWB7 429 aa25.3■■□□□ 1.64
R3HDM1-215ENST00000483021 LTBP1Q14766 1721 aa25.29■■□□□ 1.64
R3HDM1-215ENST00000483021 ZNF853P0CG23 659 aa25.29■■□□□ 1.64
R3HDM1-215ENST00000483021 SLC51AQ86UW1 340 aa25.29■■□□□ 1.64
R3HDM1-215ENST00000483021 SP8Q8IXZ3 490 aa25.29■■□□□ 1.64
R3HDM1-215ENST00000483021 TAF1P21675 1872 aa25.28■■□□□ 1.64
R3HDM1-215ENST00000483021 APAF1O14727 1248 aa25.28■■□□□ 1.64
R3HDM1-215ENST00000483021 GNAI1P63096 354 aa25.28■■□□□ 1.64
R3HDM1-215ENST00000483021 GRAPQ13588 217 aa25.28■■□□□ 1.64
R3HDM1-215ENST00000483021 TMC4Q7Z404 712 aa25.28■■□□□ 1.64
R3HDM1-215ENST00000483021 GRAPLQ8TC17 118 aaPredicted RBP25.28■■□□□ 1.64
R3HDM1-215ENST00000483021 ISCA1Q9BUE6 129 aa25.28■■□□□ 1.64
R3HDM1-215ENST00000483021 RTFDC1Q9BY42 306 aaPredicted RBP25.28■■□□□ 1.64
R3HDM1-215ENST00000483021 ITGBL1O95965 494 aaPredicted RBP25.27■■□□□ 1.64
R3HDM1-215ENST00000483021 AOC3Q16853 763 aa25.27■■□□□ 1.64
R3HDM1-215ENST00000483021 DPP8Q6V1X1 898 aaPredicted RBP25.27■■□□□ 1.64
R3HDM1-215ENST00000483021 CNTNAP1P78357 1384 aa25.26■■□□□ 1.63
R3HDM1-215ENST00000483021 TMEM88BA6NKF7 163 aa25.25■■□□□ 1.63
R3HDM1-215ENST00000483021 HSPA1AP0DMV8 641 aaKnown RBP25.25■■□□□ 1.63
R3HDM1-215ENST00000483021 HSPA1BP0DMV9 641 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms