RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 RPGRQ92834 1020 aaKnown RBP17.92■□□□□ 0.46
VARS-225ENST00000482996 ZC3H4Q9UPT8 1303 aaKnown RBP17.92■□□□□ 0.46
VARS-225ENST00000482996 GOLGA2Q08379 1002 aa17.91■□□□□ 0.46
VARS-225ENST00000482996 NLRP10Q86W26 655 aa17.91■□□□□ 0.46
VARS-225ENST00000482996 WDR63Q8IWG1 891 aa17.91■□□□□ 0.46
VARS-225ENST00000482996 SLX4Q8IY92 1834 aa17.91■□□□□ 0.46
VARS-225ENST00000482996 CCDC93Q567U6 631 aa17.9■□□□□ 0.46
VARS-225ENST00000482996 NLRP3Q96P20 1036 aa17.9■□□□□ 0.46
VARS-225ENST00000482996 TAOK3Q9H2K8 898 aa17.9■□□□□ 0.46
VARS-225ENST00000482996 TRMT112Q9UI30 125 aaKnown RBP17.9■□□□□ 0.46
VARS-225ENST00000482996 LTBP3Q9NS15 1303 aa17.9■□□□□ 0.46
VARS-225ENST00000482996 SBF1O95248 1867 aa17.9■□□□□ 0.46
VARS-225ENST00000482996 SLC10A5Q5PT55 438 aa17.89■□□□□ 0.45
VARS-225ENST00000482996 RIC3Q7Z5B4 369 aa17.89■□□□□ 0.45
VARS-225ENST00000482996 TSPYL6Q8N831 410 aa17.89■□□□□ 0.45
VARS-225ENST00000482996 C7orf43Q8WVR3 580 aa17.89■□□□□ 0.45
VARS-225ENST00000482996 RBM17Q96I25 401 aaKnown RBP17.89■□□□□ 0.45
VARS-225ENST00000482996 KDM2BQ8NHM5 1336 aa17.89■□□□□ 0.45
VARS-225ENST00000482996 ARFGEF2Q9Y6D5 1785 aa17.89■□□□□ 0.45
VARS-225ENST00000482996 TNRC6CQ9HCJ0 1690 aaKnown RBP17.88■□□□□ 0.45
VARS-225ENST00000482996 HOXA10P31260 410 aaPredicted RBP17.88■□□□□ 0.45
VARS-225ENST00000482996 STK31Q9BXU1 1019 aa17.88■□□□□ 0.45
VARS-225ENST00000482996 SH3TC1Q8TE82 1336 aa17.88■□□□□ 0.45
VARS-225ENST00000482996 ANKRD36CQ5JPF3 1778 aa17.88■□□□□ 0.45
VARS-225ENST00000482996 CACNA1SQ13698 1873 aa17.87■□□□□ 0.45
VARS-225ENST00000482996 DDX58O95786 925 aaKnown RBP17.87■□□□□ 0.45
VARS-225ENST00000482996 PRELPP51888 382 aa17.87■□□□□ 0.45
VARS-225ENST00000482996 TWISTNBQ3B726 338 aaPredicted RBP17.87■□□□□ 0.45
VARS-225ENST00000482996 RTKN2Q8IZC4 609 aa17.87■□□□□ 0.45
VARS-225ENST00000482996 CRAMP1Q96RY5 1269 aa17.87■□□□□ 0.45
VARS-225ENST00000482996 ISCA1Q9BUE6 129 aa17.87■□□□□ 0.45
VARS-225ENST00000482996 PHAXQ9H814 394 aaKnown RBP17.87■□□□□ 0.45
VARS-225ENST00000482996 ATP5J2-PTCD1G3V325 749 aa17.86■□□□□ 0.45
VARS-225ENST00000482996 CC2D2BQ6DHV5 1058 aa17.86■□□□□ 0.45
VARS-225ENST00000482996 FANCIQ9NVI1 1328 aa17.86■□□□□ 0.45
VARS-225ENST00000482996 FER1L6Q2WGJ9 1857 aa17.86■□□□□ 0.45
VARS-225ENST00000482996 KIF3CO14782 793 aa17.85■□□□□ 0.45
VARS-225ENST00000482996 HCLS1P14317 486 aaPredicted RBP17.85■□□□□ 0.45
VARS-225ENST00000482996 TRIM28Q13263 835 aaKnown RBP17.85■□□□□ 0.45
VARS-225ENST00000482996 C3orf67Q6ZVT6 689 aa17.85■□□□□ 0.45
VARS-225ENST00000482996 NMRK2Q9NPI5 230 aa17.85■□□□□ 0.45
VARS-225ENST00000482996 FKBP4Q02790 459 aaKnown RBP eCLIP17.84■□□□□ 0.45
VARS-225ENST00000482996 TMX4Q9H1E5 349 aaPredicted RBP17.84■□□□□ 0.45
VARS-225ENST00000482996 MYH16Q9H6N6 1097 aa17.84■□□□□ 0.45
VARS-225ENST00000482996 PPEF1O14829 653 aaPredicted RBP17.83■□□□□ 0.44
VARS-225ENST00000482996 GRIPAP1Q4V328 841 aa17.83■□□□□ 0.44
VARS-225ENST00000482996 DPY19L2Q6NUT2 758 aa17.83■□□□□ 0.44
VARS-225ENST00000482996 OLFM4Q6UX06 510 aa17.83■□□□□ 0.44
VARS-225ENST00000482996 SYNE4Q8N205 404 aa17.83■□□□□ 0.44
VARS-225ENST00000482996 CCDC88AQ3V6T2 1871 aa17.82■□□□□ 0.44
VARS-225ENST00000482996 GLTPD2A6NH11 291 aa17.82■□□□□ 0.44
VARS-225ENST00000482996 TCERG1O14776 1098 aaKnown RBP17.82■□□□□ 0.44
VARS-225ENST00000482996 DDX46Q7L014 1031 aaKnown RBP17.82■□□□□ 0.44
VARS-225ENST00000482996 C16orf71Q8IYS4 520 aaPredicted RBP17.82■□□□□ 0.44
VARS-225ENST00000482996 ZNF428Q96B54 188 aa17.82■□□□□ 0.44
VARS-225ENST00000482996 FAM89AQ96GI7 184 aa17.82■□□□□ 0.44
VARS-225ENST00000482996 MYD88Q99836 296 aa17.82■□□□□ 0.44
VARS-225ENST00000482996 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
VARS-225ENST00000482996 HSP90B1P14625 803 aaKnown RBP17.81■□□□□ 0.44
VARS-225ENST00000482996 EXOSC9Q06265 439 aaKnown RBP17.81■□□□□ 0.44
VARS-225ENST00000482996 METTL22Q9BUU2 404 aaPredicted RBP17.81■□□□□ 0.44
VARS-225ENST00000482996 ABCC4O15439 1325 aa17.8■□□□□ 0.44
VARS-225ENST00000482996 CCER2I3L3R5 266 aa17.8■□□□□ 0.44
VARS-225ENST00000482996 BBOX1O75936 387 aa17.8■□□□□ 0.44
VARS-225ENST00000482996 TOMM70O94826 608 aa17.8■□□□□ 0.44
VARS-225ENST00000482996 KSR2Q6VAB6 950 aa17.8■□□□□ 0.44
VARS-225ENST00000482996 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
VARS-225ENST00000482996 PSMD1Q99460 953 aa17.8■□□□□ 0.44
VARS-225ENST00000482996 RRAGCQ9HB90 399 aa17.8■□□□□ 0.44
VARS-225ENST00000482996 ZNF277Q9NRM2 450 aaPredicted RBP17.8■□□□□ 0.44
VARS-225ENST00000482996 MAP3K2Q9Y2U5 619 aa17.8■□□□□ 0.44
VARS-225ENST00000482996 TIAM2Q8IVF5 1701 aa17.8■□□□□ 0.44
VARS-225ENST00000482996 DICER1Q9UPY3 1922 aaKnown RBP17.79■□□□□ 0.44
VARS-225ENST00000482996 PI4KAP2A4QPH2 592 aa17.79■□□□□ 0.44
VARS-225ENST00000482996 VAMP4O75379 141 aa17.79■□□□□ 0.44
VARS-225ENST00000482996 NEXNQ0ZGT2 675 aa17.79■□□□□ 0.44
VARS-225ENST00000482996 RTL5Q5HYW3 569 aaPredicted RBP17.79■□□□□ 0.44
VARS-225ENST00000482996 PI4KAP1Q8N8J0 262 aa17.79■□□□□ 0.44
VARS-225ENST00000482996 ZBTB38Q8NAP3 1195 aaPredicted RBP17.79■□□□□ 0.44
VARS-225ENST00000482996 CWC25Q9NXE8 425 aaPredicted RBP17.79■□□□□ 0.44
VARS-225ENST00000482996 IRS4O14654 1257 aaPredicted RBP17.78■□□□□ 0.44
VARS-225ENST00000482996 IARSP41252 1262 aaKnown RBP17.78■□□□□ 0.44
VARS-225ENST00000482996 SPINK5Q9NQ38 1064 aaPredicted RBP17.78■□□□□ 0.44
VARS-225ENST00000482996 ATP6V0A2Q9Y487 856 aa17.78■□□□□ 0.44
VARS-225ENST00000482996 PCCAP05165 728 aaPredicted RBP17.77■□□□□ 0.44
VARS-225ENST00000482996 VEGFAP15692 232 aaPredicted RBP17.77■□□□□ 0.44
VARS-225ENST00000482996 FLIIQ13045 1269 aa17.77■□□□□ 0.44
VARS-225ENST00000482996 GRAPQ13588 217 aa17.77■□□□□ 0.44
VARS-225ENST00000482996 SF3B3Q15393 1217 aaKnown RBP17.77■□□□□ 0.44
VARS-225ENST00000482996 G2E3Q7L622 706 aa17.77■□□□□ 0.44
VARS-225ENST00000482996 TMC4Q7Z404 712 aa17.77■□□□□ 0.44
VARS-225ENST00000482996 GRAPLQ8TC17 118 aaPredicted RBP17.77■□□□□ 0.44
VARS-225ENST00000482996 SNED1Q8TER0 1413 aa17.76■□□□□ 0.43
VARS-225ENST00000482996 RBM46Q8TBY0 533 aaKnown RBP17.76■□□□□ 0.43
VARS-225ENST00000482996 JDP2Q8WYK2 163 aa17.76■□□□□ 0.43
VARS-225ENST00000482996 ZNF521Q96K83 1311 aa17.75■□□□□ 0.43
VARS-225ENST00000482996 FKBP5Q13451 457 aaPredicted RBP17.75■□□□□ 0.43
VARS-225ENST00000482996 SP8Q8IXZ3 490 aa17.75■□□□□ 0.43
VARS-225ENST00000482996 LAMB2P55268 1798 aa17.75■□□□□ 0.43
VARS-225ENST00000482996 SUPT20HQ8NEM7 779 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms