RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, humanhuman

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-208ENST00000482460 CCDC93Q567U6 631 aa29.51■■■□□ 2.31
CYTH3-208ENST00000482460 UTP14AQ9BVJ6 771 aaKnown RBP29.5■■■□□ 2.31
CYTH3-208ENST00000482460 RRAGCQ9HB90 399 aa29.5■■■□□ 2.31
CYTH3-208ENST00000482460 MRS2Q9HD23 443 aa29.5■■■□□ 2.31
CYTH3-208ENST00000482460 TIAM2Q8IVF5 1701 aa29.5■■■□□ 2.31
CYTH3-208ENST00000482460 TCIRG1Q13488 830 aa29.49■■■□□ 2.31
CYTH3-208ENST00000482460 ANKRD36CQ5JPF3 1778 aa29.49■■■□□ 2.31
CYTH3-208ENST00000482460 HYPKQ9NX55 129 aa29.48■■■□□ 2.31
CYTH3-208ENST00000482460 HSPA6P17066 643 aa29.47■■■□□ 2.31
CYTH3-208ENST00000482460 HOXA10P31260 410 aaPredicted RBP29.47■■■□□ 2.31
CYTH3-208ENST00000482460 C16orf71Q8IYS4 520 aaPredicted RBP29.47■■■□□ 2.31
CYTH3-208ENST00000482460 RPGRQ92834 1020 aaKnown RBP29.47■■■□□ 2.31
CYTH3-208ENST00000482460 RNF123Q5XPI4 1314 aa29.46■■■□□ 2.31
CYTH3-208ENST00000482460 CCDC27Q2M243 656 aa29.46■■■□□ 2.31
CYTH3-208ENST00000482460 SLC10A5Q5PT55 438 aa29.46■■■□□ 2.31
CYTH3-208ENST00000482460 DPY19L2Q6NUT2 758 aa29.46■■■□□ 2.31
CYTH3-208ENST00000482460 ANKRD13DQ6ZTN6 518 aa29.46■■■□□ 2.31
CYTH3-208ENST00000482460 NLRP10Q86W26 655 aa29.46■■■□□ 2.31
CYTH3-208ENST00000482460 RTKN2Q8IZC4 609 aa29.46■■■□□ 2.31
CYTH3-208ENST00000482460 PLBD2Q8NHP8 589 aa29.46■■■□□ 2.31
CYTH3-208ENST00000482460 RBM46Q8TBY0 533 aaKnown RBP29.45■■■□□ 2.31
CYTH3-208ENST00000482460 NLRP3Q96P20 1036 aa29.45■■■□□ 2.31
CYTH3-208ENST00000482460 ELL2O00472 640 aaPredicted RBP29.44■■■□□ 2.3
CYTH3-208ENST00000482460 FKBP4Q02790 459 aaKnown RBP eCLIP29.44■■■□□ 2.3
CYTH3-208ENST00000482460 OLFM4Q6UX06 510 aa29.44■■■□□ 2.3
CYTH3-208ENST00000482460 RBM17Q96I25 401 aaKnown RBP29.44■■■□□ 2.3
CYTH3-208ENST00000482460 CRAMP1Q96RY5 1269 aa29.43■■■□□ 2.3
CYTH3-208ENST00000482460 NCBP3Q53F19 620 aaKnown RBP29.42■■■□□ 2.3
CYTH3-208ENST00000482460 C3orf67Q6ZVT6 689 aa29.42■■■□□ 2.3
CYTH3-208ENST00000482460 C8orf58Q8NAV2 365 aa29.42■■■□□ 2.3
CYTH3-208ENST00000482460 VEGFAP15692 232 aaPredicted RBP29.41■■■□□ 2.3
CYTH3-208ENST00000482460 CC2D2BQ6DHV5 1058 aa29.41■■■□□ 2.3
CYTH3-208ENST00000482460 WWC1Q8IX03 1113 aa29.41■■■□□ 2.3
CYTH3-208ENST00000482460 TRMT112Q9UI30 125 aaKnown RBP29.41■■■□□ 2.3
CYTH3-208ENST00000482460 CHMP4AQ9BY43 222 aa29.4■■■□□ 2.3
CYTH3-208ENST00000482460 ISCA1Q9BUE6 129 aa29.38■■■□□ 2.29
CYTH3-208ENST00000482460 ZNF277Q9NRM2 450 aaPredicted RBP29.38■■■□□ 2.29
CYTH3-208ENST00000482460 SH3TC1Q8TE82 1336 aa29.38■■■□□ 2.29
CYTH3-208ENST00000482460 FSTL1Q12841 308 aa29.37■■■□□ 2.29
CYTH3-208ENST00000482460 GRIPAP1Q4V328 841 aa29.37■■■□□ 2.29
CYTH3-208ENST00000482460 SYNE4Q8N205 404 aa29.37■■■□□ 2.29
CYTH3-208ENST00000482460 PSMD1Q99460 953 aa29.37■■■□□ 2.29
CYTH3-208ENST00000482460 CEP350Q5VT06 3117 aa29.37■■■□□ 2.29
CYTH3-208ENST00000482460 WDR90Q96KV7 1748 aa29.37■■■□□ 2.29
CYTH3-208ENST00000482460 HCLS1P14317 486 aaPredicted RBP29.36■■■□□ 2.29
CYTH3-208ENST00000482460 CCDC30Q5VVM6 783 aa29.36■■■□□ 2.29
CYTH3-208ENST00000482460 PHAXQ9H814 394 aaKnown RBP29.36■■■□□ 2.29
CYTH3-208ENST00000482460 SNED1Q8TER0 1413 aa29.36■■■□□ 2.29
CYTH3-208ENST00000482460 POTECB2RU33 542 aa29.35■■■□□ 2.29
CYTH3-208ENST00000482460 PPEF1O14829 653 aaPredicted RBP29.35■■■□□ 2.29
CYTH3-208ENST00000482460 TSPYL6Q8N831 410 aa29.35■■■□□ 2.29
CYTH3-208ENST00000482460 TSR2Q969E8 191 aaKnown RBP29.35■■■□□ 2.29
CYTH3-208ENST00000482460 IL16Q14005 1332 aa29.35■■■□□ 2.29
CYTH3-208ENST00000482460 LAMB2P55268 1798 aa29.34■■■□□ 2.29
CYTH3-208ENST00000482460 ATP5J2-PTCD1G3V325 749 aa29.34■■■□□ 2.29
CYTH3-208ENST00000482460 GOLGA2Q08379 1002 aa29.34■■■□□ 2.29
CYTH3-208ENST00000482460 TRIM28Q13263 835 aaKnown RBP29.34■■■□□ 2.29
CYTH3-208ENST00000482460 RIC3Q7Z5B4 369 aa29.34■■■□□ 2.29
CYTH3-208ENST00000482460 DDNO94850 711 aaPredicted RBP29.33■■■□□ 2.29
CYTH3-208ENST00000482460 IARSP41252 1262 aaKnown RBP29.33■■■□□ 2.29
CYTH3-208ENST00000482460 APLP1P51693 650 aa29.32■■■□□ 2.28
CYTH3-208ENST00000482460 ABCC4O15439 1325 aa29.31■■■□□ 2.28
CYTH3-208ENST00000482460 TCERG1O14776 1098 aaKnown RBP29.31■■■□□ 2.28
CYTH3-208ENST00000482460 SMC1BQ8NDV3 1235 aa29.31■■■□□ 2.28
CYTH3-208ENST00000482460 ZNF428Q96B54 188 aa29.31■■■□□ 2.28
CYTH3-208ENST00000482460 FAM89AQ96GI7 184 aa29.3■■■□□ 2.28
CYTH3-208ENST00000482460 TMX4Q9H1E5 349 aaPredicted RBP29.3■■■□□ 2.28
CYTH3-208ENST00000482460 ATP6V0A2Q9Y487 856 aa29.3■■■□□ 2.28
CYTH3-208ENST00000482460 BBOX1O75936 387 aa29.29■■■□□ 2.28
CYTH3-208ENST00000482460 DDX46Q7L014 1031 aaKnown RBP29.29■■■□□ 2.28
CYTH3-208ENST00000482460 WDR63Q8IWG1 891 aa29.28■■■□□ 2.28
CYTH3-208ENST00000482460 FZD9O00144 591 aa29.27■■■□□ 2.28
CYTH3-208ENST00000482460 DDX58O95786 925 aaKnown RBP29.27■■■□□ 2.28
CYTH3-208ENST00000482460 TWISTNBQ3B726 338 aaPredicted RBP29.27■■■□□ 2.28
CYTH3-208ENST00000482460 SLC51AQ86UW1 340 aa29.27■■■□□ 2.28
CYTH3-208ENST00000482460 JDP2Q8WYK2 163 aa29.27■■■□□ 2.28
CYTH3-208ENST00000482460 SALL2Q9Y467 1007 aaPredicted RBP29.27■■■□□ 2.28
CYTH3-208ENST00000482460 DDX60Q8IY21 1712 aaKnown RBP29.27■■■□□ 2.28
CYTH3-208ENST00000482460 FAM9BQ8IZU0 186 aa29.26■■■□□ 2.27
CYTH3-208ENST00000482460 L3MBTL3Q96JM7 780 aaPredicted RBP29.26■■■□□ 2.27
CYTH3-208ENST00000482460 MYD88Q99836 296 aa29.26■■■□□ 2.27
CYTH3-208ENST00000482460 GRAPQ13588 217 aa29.25■■■□□ 2.27
CYTH3-208ENST00000482460 SP8Q8IXZ3 490 aa29.25■■■□□ 2.27
CYTH3-208ENST00000482460 GRAPLQ8TC17 118 aaPredicted RBP29.25■■■□□ 2.27
CYTH3-208ENST00000482460 STK31Q9BXU1 1019 aa29.25■■■□□ 2.27
CYTH3-208ENST00000482460 ZNF541Q9H0D2 1346 aa29.24■■■□□ 2.27
CYTH3-208ENST00000482460 SF3B3Q15393 1217 aaKnown RBP29.24■■■□□ 2.27
CYTH3-208ENST00000482460 IQCA1LA6NCM1 817 aa29.23■■■□□ 2.27
CYTH3-208ENST00000482460 RTL5Q5HYW3 569 aaPredicted RBP29.23■■■□□ 2.27
CYTH3-208ENST00000482460 ZBTB38Q8NAP3 1195 aaPredicted RBP29.23■■■□□ 2.27
CYTH3-208ENST00000482460 CCDC191Q8NCU4 936 aa29.23■■■□□ 2.27
CYTH3-208ENST00000482460 METTL22Q9BUU2 404 aaPredicted RBP29.23■■■□□ 2.27
CYTH3-208ENST00000482460 TAF1P21675 1872 aa29.23■■■□□ 2.27
CYTH3-208ENST00000482460 SCN4AP35499 1836 aa29.22■■■□□ 2.27
CYTH3-208ENST00000482460 IRS4O14654 1257 aaPredicted RBP29.22■■■□□ 2.27
CYTH3-208ENST00000482460 LARGE2Q8N3Y3 721 aa29.22■■■□□ 2.27
CYTH3-208ENST00000482460 VPS33BQ9H267 617 aa29.22■■■□□ 2.27
CYTH3-208ENST00000482460 FANCIQ9NVI1 1328 aa29.21■■■□□ 2.27
CYTH3-208ENST00000482460 KSR2Q6VAB6 950 aa29.21■■■□□ 2.27
CYTH3-208ENST00000482460 TMC4Q7Z404 712 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms