RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 PRR20AP86496 221 aa10.31□□□□□ -0.76
SEC22A-207ENST00000481965 USPL1Q5W0Q7 1092 aa10.31□□□□□ -0.76
SEC22A-207ENST00000481965 METTL5Q9NRN9 209 aaKnown RBP10.31□□□□□ -0.76
SEC22A-207ENST00000481965 FAM13BQ9NYF5 915 aa10.31□□□□□ -0.76
SEC22A-207ENST00000481965 FOXD3Q9UJU5 478 aaPredicted RBP10.31□□□□□ -0.76
SEC22A-207ENST00000481965 GPC6Q9Y625 555 aaPredicted RBP10.31□□□□□ -0.76
SEC22A-207ENST00000481965 AK5Q9Y6K8 562 aa10.31□□□□□ -0.76
SEC22A-207ENST00000481965 HIF1AQ16665 826 aa10.3□□□□□ -0.76
SEC22A-207ENST00000481965 XKR5Q6UX68 686 aa10.3□□□□□ -0.76
SEC22A-207ENST00000481965 PRICKLE2Q7Z3G6 844 aa10.3□□□□□ -0.76
SEC22A-207ENST00000481965 DRC1Q96MC2 740 aa10.3□□□□□ -0.76
SEC22A-207ENST00000481965 ZIC5Q96T25 663 aa10.3□□□□□ -0.76
SEC22A-207ENST00000481965 PLA2G2EQ9NZK7 142 aa10.3□□□□□ -0.76
SEC22A-207ENST00000481965 KCNMB2Q9Y691 235 aa10.3□□□□□ -0.76
SEC22A-207ENST00000481965 CAPN5O15484 640 aaPredicted RBP10.29□□□□□ -0.76
SEC22A-207ENST00000481965 TNFRSF21O75509 655 aa10.29□□□□□ -0.76
SEC22A-207ENST00000481965 PI16Q6UXB8 463 aa10.29□□□□□ -0.76
SEC22A-207ENST00000481965 CPNE3O75131 537 aaKnown RBP10.28□□□□□ -0.76
SEC22A-207ENST00000481965 RPLP1P05386 114 aaKnown RBP10.28□□□□□ -0.76
SEC22A-207ENST00000481965 TATP17735 454 aaPredicted RBP10.28□□□□□ -0.76
SEC22A-207ENST00000481965 BTLAQ7Z6A9 289 aa10.28□□□□□ -0.76
SEC22A-207ENST00000481965 RNF34Q969K3 372 aa10.28□□□□□ -0.76
SEC22A-207ENST00000481965 RTCBQ9Y3I0 505 aaKnown RBP10.28□□□□□ -0.76
SEC22A-207ENST00000481965 IRS1P35568 1242 aa10.27□□□□□ -0.77
SEC22A-207ENST00000481965 ARSDP51689 593 aa10.27□□□□□ -0.77
SEC22A-207ENST00000481965 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.27□□□□□ -0.77
SEC22A-207ENST00000481965 CRELD1Q96HD1 420 aa10.27□□□□□ -0.77
SEC22A-207ENST00000481965 MSX1P28360 303 aa10.26□□□□□ -0.77
SEC22A-207ENST00000481965 ZNF76P36508 570 aa10.26□□□□□ -0.77
SEC22A-207ENST00000481965 WDR44Q5JSH3 913 aa10.26□□□□□ -0.77
SEC22A-207ENST00000481965 LRRC69Q6ZNQ3 347 aa10.26□□□□□ -0.77
SEC22A-207ENST00000481965 BICDL1Q6ZP65 573 aa10.26□□□□□ -0.77
SEC22A-207ENST00000481965 FRMD6Q96NE9 622 aa10.26□□□□□ -0.77
SEC22A-207ENST00000481965 TINF2Q9BSI4 451 aa10.26□□□□□ -0.77
SEC22A-207ENST00000481965 OSBPL7Q9BZF2 842 aa10.26□□□□□ -0.77
SEC22A-207ENST00000481965 TMEM63CQ9P1W3 806 aa10.26□□□□□ -0.77
SEC22A-207ENST00000481965 NEFLP07196 543 aa10.25□□□□□ -0.77
SEC22A-207ENST00000481965 RHOQP17081 205 aa10.25□□□□□ -0.77
SEC22A-207ENST00000481965 ITGAEP38570 1179 aa10.25□□□□□ -0.77
SEC22A-207ENST00000481965 C6orf118Q5T5N4 469 aa10.25□□□□□ -0.77
SEC22A-207ENST00000481965 LYSMD3Q7Z3D4 306 aa10.25□□□□□ -0.77
SEC22A-207ENST00000481965 TTC16Q8NEE8 873 aa10.25□□□□□ -0.77
SEC22A-207ENST00000481965 EPS8L3Q8TE67 593 aaKnown RBP10.25□□□□□ -0.77
SEC22A-207ENST00000481965 CCDC74AQ96AQ1 378 aa10.25□□□□□ -0.77
SEC22A-207ENST00000481965 TGIF2Q9GZN2 237 aa10.25□□□□□ -0.77
SEC22A-207ENST00000481965 ANKIB1Q9P2G1 1089 aa10.25□□□□□ -0.77
SEC22A-207ENST00000481965 BMP2P12643 396 aa10.24□□□□□ -0.77
SEC22A-207ENST00000481965 TYRO3Q06418 890 aa10.24□□□□□ -0.77
SEC22A-207ENST00000481965 PDE12Q6L8Q7 609 aaKnown RBP10.24□□□□□ -0.77
SEC22A-207ENST00000481965 CMTR1Q8N1G2 835 aaKnown RBP10.24□□□□□ -0.77
SEC22A-207ENST00000481965 SNX29Q8TEQ0 813 aa10.24□□□□□ -0.77
SEC22A-207ENST00000481965 CHRDQ9H2X0 955 aa10.24□□□□□ -0.77
SEC22A-207ENST00000481965 ZFYVE28Q9HCC9 887 aa10.24□□□□□ -0.77
SEC22A-207ENST00000481965 SPG7Q9UQ90 795 aa10.24□□□□□ -0.77
SEC22A-207ENST00000481965 UBAP1LF5GYI3 381 aa10.23□□□□□ -0.77
SEC22A-207ENST00000481965 UPP2O95045 317 aa10.23□□□□□ -0.77
SEC22A-207ENST00000481965 MRPL14Q6P1L8 145 aaKnown RBP10.23□□□□□ -0.77
SEC22A-207ENST00000481965 ZNF438Q7Z4V0 828 aa10.23□□□□□ -0.77
SEC22A-207ENST00000481965 ELP3Q9H9T3 547 aa10.23□□□□□ -0.77
SEC22A-207ENST00000481965 A0A1B0GTH6 734 aa10.22□□□□□ -0.77
SEC22A-207ENST00000481965 A0A1W2PNR3 127 aa10.22□□□□□ -0.77
SEC22A-207ENST00000481965 EIF4BP23588 611 aaKnown RBP10.22□□□□□ -0.77
SEC22A-207ENST00000481965 ARSJQ5FYB0 599 aaPredicted RBP10.22□□□□□ -0.77
SEC22A-207ENST00000481965 ACBD3Q9H3P7 528 aa10.22□□□□□ -0.77
SEC22A-207ENST00000481965 C12orf49Q9H741 205 aa10.22□□□□□ -0.77
SEC22A-207ENST00000481965 TIMMDC1Q9NPL8 285 aa10.22□□□□□ -0.77
SEC22A-207ENST00000481965 CNTN3Q9P232 1028 aa10.21□□□□□ -0.77
SEC22A-207ENST00000481965 FNDC3AQ9Y2H6 1198 aaKnown RBP10.21□□□□□ -0.77
SEC22A-207ENST00000481965 POLR3DP05423 398 aaPredicted RBP10.2□□□□□ -0.78
SEC22A-207ENST00000481965 TNNI2P48788 182 aa10.2□□□□□ -0.78
SEC22A-207ENST00000481965 SOS2Q07890 1332 aaPredicted RBP10.2□□□□□ -0.78
SEC22A-207ENST00000481965 SF3A1Q15459 793 aaKnown RBP10.2□□□□□ -0.78
SEC22A-207ENST00000481965 NPHS2Q9NP85 383 aa10.2□□□□□ -0.78
SEC22A-207ENST00000481965 TTLL8A6PVC2 850 aa10.19□□□□□ -0.78
SEC22A-207ENST00000481965 PHACTR2O75167 634 aa10.19□□□□□ -0.78
SEC22A-207ENST00000481965 RACK1P63244 317 aaKnown RBP10.19□□□□□ -0.78
SEC22A-207ENST00000481965 ZNF394Q53GI3 561 aa10.19□□□□□ -0.78
SEC22A-207ENST00000481965 MEI1Q5TIA1 1274 aa10.19□□□□□ -0.78
SEC22A-207ENST00000481965 CRISPLD1Q9H336 500 aa10.19□□□□□ -0.78
SEC22A-207ENST00000481965 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.19□□□□□ -0.78
SEC22A-207ENST00000481965 USP31Q70CQ4 1352 aa10.18□□□□□ -0.78
SEC22A-207ENST00000481965 FIGNL2A6NMB9 653 aa10.18□□□□□ -0.78
SEC22A-207ENST00000481965 EREGO14944 169 aa10.18□□□□□ -0.78
SEC22A-207ENST00000481965 EGFRP00533 1210 aa10.18□□□□□ -0.78
SEC22A-207ENST00000481965 BMP1P13497 986 aa10.18□□□□□ -0.78
SEC22A-207ENST00000481965 PTPN12Q05209 780 aaKnown RBP10.18□□□□□ -0.78
SEC22A-207ENST00000481965 TRIM46Q7Z4K8 759 aa10.18□□□□□ -0.78
SEC22A-207ENST00000481965 C1orf127Q8N9H9 656 aa10.18□□□□□ -0.78
SEC22A-207ENST00000481965 UBXN4Q92575 508 aa10.18□□□□□ -0.78
SEC22A-207ENST00000481965 ZCCHC2Q9C0B9 1178 aaKnown RBP10.18□□□□□ -0.78
SEC22A-207ENST00000481965 CCSER2Q9H7U1 834 aa10.18□□□□□ -0.78
SEC22A-207ENST00000481965 NEUROD4Q9HD90 331 aa10.18□□□□□ -0.78
SEC22A-207ENST00000481965 PPP1R1BQ9UD71 204 aaPredicted RBP10.18□□□□□ -0.78
SEC22A-207ENST00000481965 DDX41Q9UJV9 622 aaKnown RBP10.18□□□□□ -0.78
SEC22A-207ENST00000481965 PCDHGB7Q9Y5F8 929 aa10.18□□□□□ -0.78
SEC22A-207ENST00000481965 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.18□□□□□ -0.78
SEC22A-207ENST00000481965 GIPC1O14908 333 aa10.17□□□□□ -0.78
SEC22A-207ENST00000481965 XYLBO75191 536 aa10.17□□□□□ -0.78
SEC22A-207ENST00000481965 GALNT12Q8IXK2 581 aa10.17□□□□□ -0.78
SEC22A-207ENST00000481965 SLC43A3Q8NBI5 491 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms