RNA–Protein interactions for RNA: ENST00000481285.5

LONRF3-206, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 2

Gene LONRF3, Length 2,895 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-206ENST00000481285 DDX54Q8TDD1 881 aaKnown RBP20.74■□□□□ 0.91
LONRF3-206ENST00000481285 ABCA3Q99758 1704 aa20.73■□□□□ 0.91
LONRF3-206ENST00000481285 A0A087WZG4 1122 aa20.73■□□□□ 0.91
LONRF3-206ENST00000481285 MCTP1Q6DN14 999 aa20.73■□□□□ 0.91
LONRF3-206ENST00000481285 CUL4AQ13619 759 aa20.72■□□□□ 0.91
LONRF3-206ENST00000481285 TLR7Q9NYK1 1049 aaKnown RBP20.72■□□□□ 0.91
LONRF3-206ENST00000481285 SNX14Q9Y5W7 946 aa20.72■□□□□ 0.91
LONRF3-206ENST00000481285 NBPF26B4DH59 902 aa20.71■□□□□ 0.91
LONRF3-206ENST00000481285 NKX1-1Q15270 411 aaPredicted RBP20.71■□□□□ 0.91
LONRF3-206ENST00000481285 NBPF14Q5TI25 921 aa20.71■□□□□ 0.91
LONRF3-206ENST00000481285 NBPF10Q6P3W6 841 aaKnown RBP20.71■□□□□ 0.91
LONRF3-206ENST00000481285 NBPF15Q8N660 670 aa20.71■□□□□ 0.91
LONRF3-206ENST00000481285 COPRSQ9NQ92 184 aa20.71■□□□□ 0.91
LONRF3-206ENST00000481285 INTS4Q96HW7 963 aaKnown RBP20.71■□□□□ 0.91
LONRF3-206ENST00000481285 COL15A1P39059 1388 aa20.7■□□□□ 0.9
LONRF3-206ENST00000481285 HIP1O00291 1037 aa20.7■□□□□ 0.9
LONRF3-206ENST00000481285 RABL6Q3YEC7 729 aaPredicted RBP20.7■□□□□ 0.9
LONRF3-206ENST00000481285 ZDHHC9Q9Y397 364 aa20.7■□□□□ 0.9
LONRF3-206ENST00000481285 UBR2Q8IWV8 1755 aa20.69■□□□□ 0.9
LONRF3-206ENST00000481285 BOLA2Q9H3K6 86 aa20.69■□□□□ 0.9
LONRF3-206ENST00000481285 DDX49Q9Y6V7 483 aaKnown RBP20.69■□□□□ 0.9
LONRF3-206ENST00000481285 RBM27Q9P2N5 1060 aaKnown RBP20.69■□□□□ 0.9
LONRF3-206ENST00000481285 KCPQ6ZWJ8 1503 aa20.69■□□□□ 0.9
LONRF3-206ENST00000481285 RFX5P48382 616 aaPredicted RBP20.68■□□□□ 0.9
LONRF3-206ENST00000481285 PTPN12Q05209 780 aaKnown RBP20.68■□□□□ 0.9
LONRF3-206ENST00000481285 RASEFQ8IZ41 740 aa20.68■□□□□ 0.9
LONRF3-206ENST00000481285 MRE11P49959 708 aa20.68■□□□□ 0.9
LONRF3-206ENST00000481285 ISY1Q9ULR0 285 aaKnown RBP20.68■□□□□ 0.9
LONRF3-206ENST00000481285 KLHL40Q2TBA0 621 aa20.68■□□□□ 0.9
LONRF3-206ENST00000481285 A1BGP04217 495 aa20.67■□□□□ 0.9
LONRF3-206ENST00000481285 PTH1RQ03431 593 aa20.67■□□□□ 0.9
LONRF3-206ENST00000481285 TTLL7Q6ZT98 887 aa20.67■□□□□ 0.9
LONRF3-206ENST00000481285 FSD1Q9BTV5 496 aa20.67■□□□□ 0.9
LONRF3-206ENST00000481285 PAPPAQ13219 1627 aa20.67■□□□□ 0.9
LONRF3-206ENST00000481285 SHANK3Q9BYB0 1731 aa20.66■□□□□ 0.9
LONRF3-206ENST00000481285 CASP7P55210 303 aa20.66■□□□□ 0.9
LONRF3-206ENST00000481285 MPNDQ8N594 471 aa20.66■□□□□ 0.9
LONRF3-206ENST00000481285 TFCP2Q12800 502 aa20.66■□□□□ 0.9
LONRF3-206ENST00000481285 CWC25Q9NXE8 425 aaPredicted RBP20.66■□□□□ 0.9
LONRF3-206ENST00000481285 NMIQ13287 307 aaPredicted RBP20.65■□□□□ 0.9
LONRF3-206ENST00000481285 TNNI3KQ59H18 835 aa20.65■□□□□ 0.9
LONRF3-206ENST00000481285 CAVIN1Q6NZI2 390 aaKnown RBP20.65■□□□□ 0.9
LONRF3-206ENST00000481285 FAM227BQ96M60 508 aa20.65■□□□□ 0.9
LONRF3-206ENST00000481285 CHMP3Q9Y3E7 222 aa20.65■□□□□ 0.9
LONRF3-206ENST00000481285 FPGT-TNNI3KV9GXZ4 949 aa20.65■□□□□ 0.9
LONRF3-206ENST00000481285 CCDC171Q6TFL3 1326 aa20.65■□□□□ 0.9
LONRF3-206ENST00000481285 PRPF40BQ6NWY9 871 aaKnown RBP20.65■□□□□ 0.9
LONRF3-206ENST00000481285 LMBR1LQ6UX01 489 aa20.65■□□□□ 0.9
LONRF3-206ENST00000481285 TTC14Q96N46 770 aa20.65■□□□□ 0.9
LONRF3-206ENST00000481285 NHSL1Q5SYE7 1610 aa20.65■□□□□ 0.9
LONRF3-206ENST00000481285 CASTP20810 708 aaKnown RBP20.64■□□□□ 0.9
LONRF3-206ENST00000481285 ZBTB3Q9H5J0 574 aa20.64■□□□□ 0.9
LONRF3-206ENST00000481285 LMBRD1Q9NUN5 540 aa20.64■□□□□ 0.9
LONRF3-206ENST00000481285 TMOD3Q9NYL9 352 aa20.64■□□□□ 0.89
LONRF3-206ENST00000481285 TNS2Q63HR2 1409 aa20.64■□□□□ 0.89
LONRF3-206ENST00000481285 ESPNB1AK53 854 aa20.64■□□□□ 0.89
LONRF3-206ENST00000481285 KCNJ4P48050 445 aa20.64■□□□□ 0.89
LONRF3-206ENST00000481285 AK2P54819 239 aa20.64■□□□□ 0.89
LONRF3-206ENST00000481285 H7C1W4 665 aa20.63■□□□□ 0.89
LONRF3-206ENST00000481285 BRD1O95696 1058 aa20.63■□□□□ 0.89
LONRF3-206ENST00000481285 DBNLQ9UJU6 430 aaKnown RBP20.63■□□□□ 0.89
LONRF3-206ENST00000481285 NUP188Q5SRE5 1749 aa20.63■□□□□ 0.89
LONRF3-206ENST00000481285 ZKSCAN1P17029 563 aaPredicted RBP20.62■□□□□ 0.89
LONRF3-206ENST00000481285 TRIM44Q96DX7 344 aaPredicted RBP20.62■□□□□ 0.89
LONRF3-206ENST00000481285 JAKMIP1Q96N16 626 aaKnown RBP20.62■□□□□ 0.89
LONRF3-206ENST00000481285 PRPF40AO75400 957 aaKnown RBP20.62■□□□□ 0.89
LONRF3-206ENST00000481285 FOXO4P98177 505 aa20.62■□□□□ 0.89
LONRF3-206ENST00000481285 NSFL1CQ9UNZ2 370 aaKnown RBP20.62■□□□□ 0.89
LONRF3-206ENST00000481285 LIMCH1Q9UPQ0 1083 aa20.62■□□□□ 0.89
LONRF3-206ENST00000481285 ATP5JP18859 108 aa20.61■□□□□ 0.89
LONRF3-206ENST00000481285 RBM8AQ9Y5S9 174 aaKnown RBP20.61■□□□□ 0.89
LONRF3-206ENST00000481285 A0A0D9SFI3 127 aa20.61■□□□□ 0.89
LONRF3-206ENST00000481285 UBE2Q2Q8WVN8 375 aa20.61■□□□□ 0.89
LONRF3-206ENST00000481285 ARID3AQ99856 593 aa20.61■□□□□ 0.89
LONRF3-206ENST00000481285 LARP6Q9BRS8 491 aaKnown RBP20.61■□□□□ 0.89
LONRF3-206ENST00000481285 CPA1P15085 419 aa20.6■□□□□ 0.89
LONRF3-206ENST00000481285 NECTIN1Q15223 517 aa20.6■□□□□ 0.89
LONRF3-206ENST00000481285 CCDC191Q8NCU4 936 aa20.6■□□□□ 0.89
LONRF3-206ENST00000481285 BTG4Q9NY30 223 aa20.6■□□□□ 0.89
LONRF3-206ENST00000481285 RUFY3Q7L099 469 aa20.6■□□□□ 0.89
LONRF3-206ENST00000481285 KCNB2Q92953 911 aa20.6■□□□□ 0.89
LONRF3-206ENST00000481285 SNRKQ9NRH2 765 aa20.6■□□□□ 0.89
LONRF3-206ENST00000481285 TOGARAM1Q9Y4F4 1720 aa20.6■□□□□ 0.89
LONRF3-206ENST00000481285 ADCK5Q3MIX3 580 aa20.6■□□□□ 0.89
LONRF3-206ENST00000481285 MAP4K1Q92918 833 aa20.6■□□□□ 0.89
LONRF3-206ENST00000481285 ZNF330Q9Y3S2 320 aaPredicted RBP20.6■□□□□ 0.89
LONRF3-206ENST00000481285 CYP46A1Q9Y6A2 500 aa20.6■□□□□ 0.89
LONRF3-206ENST00000481285 CREB3L3Q68CJ9 461 aa20.59■□□□□ 0.89
LONRF3-206ENST00000481285 EDC3Q96F86 508 aaKnown RBP20.59■□□□□ 0.89
LONRF3-206ENST00000481285 TM6SF1Q9BZW5 370 aa20.59■□□□□ 0.89
LONRF3-206ENST00000481285 PDRG1Q9NUG6 133 aa20.59■□□□□ 0.89
LONRF3-206ENST00000481285 VPS53Q5VIR6 699 aa20.59■□□□□ 0.89
LONRF3-206ENST00000481285 DBNDD2Q9BQY9 259 aa20.59■□□□□ 0.89
LONRF3-206ENST00000481285 CLCN1P35523 988 aa20.58■□□□□ 0.89
LONRF3-206ENST00000481285 TJP1Q07157 1748 aa20.58■□□□□ 0.89
LONRF3-206ENST00000481285 ZSWIM6Q9HCJ5 1215 aa20.58■□□□□ 0.89
LONRF3-206ENST00000481285 MED23Q9ULK4 1368 aa20.58■□□□□ 0.88
LONRF3-206ENST00000481285 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.58■□□□□ 0.88
LONRF3-206ENST00000481285 WDR33Q9C0J8 1336 aaKnown RBP20.57■□□□□ 0.88
LONRF3-206ENST00000481285 DNAJC2Q99543 621 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms