RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 GPTP24298 496 aa12.38□□□□□ -0.43
GTF3C2-210ENST00000480989 EPHX2P34913 555 aa12.38□□□□□ -0.43
GTF3C2-210ENST00000480989 VEGFBP49765 207 aa12.38□□□□□ -0.43
GTF3C2-210ENST00000480989 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
GTF3C2-210ENST00000480989 ZBTB3Q9H5J0 574 aa12.38□□□□□ -0.43
GTF3C2-210ENST00000480989 IBTKQ9P2D0 1353 aaPredicted RBP12.38□□□□□ -0.43
GTF3C2-210ENST00000480989 HOXA10P31260 410 aaPredicted RBP12.37□□□□□ -0.43
GTF3C2-210ENST00000480989 SCNN1DP51172 638 aa12.37□□□□□ -0.43
GTF3C2-210ENST00000480989 PDIA6Q15084 440 aa12.37□□□□□ -0.43
GTF3C2-210ENST00000480989 PROSER3Q2NL68 480 aa12.37□□□□□ -0.43
GTF3C2-210ENST00000480989 EAPPQ56P03 285 aaPredicted RBP12.37□□□□□ -0.43
GTF3C2-210ENST00000480989 ZNF34Q8IZ26 560 aa12.37□□□□□ -0.43
GTF3C2-210ENST00000480989 RTKN2Q8IZC4 609 aa12.37□□□□□ -0.43
GTF3C2-210ENST00000480989 PSMD1Q99460 953 aa12.37□□□□□ -0.43
GTF3C2-210ENST00000480989 HACL1Q9UJ83 578 aa12.37□□□□□ -0.43
GTF3C2-210ENST00000480989 RRP7AQ9Y3A4 280 aaKnown RBP12.37□□□□□ -0.43
GTF3C2-210ENST00000480989 ANXA1P04083 346 aa12.36□□□□□ -0.43
GTF3C2-210ENST00000480989 MYL6BP14649 208 aa12.36□□□□□ -0.43
GTF3C2-210ENST00000480989 NFE2L2Q16236 605 aa12.36□□□□□ -0.43
GTF3C2-210ENST00000480989 TRPM7Q96QT4 1865 aa12.36□□□□□ -0.43
GTF3C2-210ENST00000480989 DUOX1Q9NRD9 1551 aa12.35□□□□□ -0.43
GTF3C2-210ENST00000480989 TMEM88BA6NKF7 163 aa12.35□□□□□ -0.43
GTF3C2-210ENST00000480989 ALDH1B1P30837 517 aa12.35□□□□□ -0.43
GTF3C2-210ENST00000480989 GPC2Q8N158 579 aa12.35□□□□□ -0.43
GTF3C2-210ENST00000480989 DDX60Q8IY21 1712 aaKnown RBP12.34□□□□□ -0.43
GTF3C2-210ENST00000480989 RASSF10A6NK89 507 aa12.34□□□□□ -0.43
GTF3C2-210ENST00000480989 EPS15P42566 896 aa12.34□□□□□ -0.43
GTF3C2-210ENST00000480989 GIGYF2Q6Y7W6 1299 aaKnown RBP12.34□□□□□ -0.43
GTF3C2-210ENST00000480989 CNTROBQ8N137 903 aa12.34□□□□□ -0.43
GTF3C2-210ENST00000480989 WBP1LQ9NX94 342 aa12.34□□□□□ -0.43
GTF3C2-210ENST00000480989 LRRC37AA6NMS7 1700 aa12.34□□□□□ -0.43
GTF3C2-210ENST00000480989 TCERG1O14776 1098 aaKnown RBP12.33□□□□□ -0.44
GTF3C2-210ENST00000480989 NYXQ9GZU5 481 aa12.33□□□□□ -0.44
GTF3C2-210ENST00000480989 CLEC11AQ9Y240 323 aa12.33□□□□□ -0.44
GTF3C2-210ENST00000480989 PPEF1O14829 653 aaPredicted RBP12.32□□□□□ -0.44
GTF3C2-210ENST00000480989 GTF2E1P29083 439 aaPredicted RBP12.32□□□□□ -0.44
GTF3C2-210ENST00000480989 KRT24Q2M2I5 525 aa12.32□□□□□ -0.44
GTF3C2-210ENST00000480989 KIF6Q6ZMV9 814 aa12.32□□□□□ -0.44
GTF3C2-210ENST00000480989 PNISRQ8TF01 805 aaKnown RBP12.32□□□□□ -0.44
GTF3C2-210ENST00000480989 CRAMP1Q96RY5 1269 aa12.32□□□□□ -0.44
GTF3C2-210ENST00000480989 GJA3Q9Y6H8 435 aa12.32□□□□□ -0.44
GTF3C2-210ENST00000480989 ABCC4O15439 1325 aa12.32□□□□□ -0.44
GTF3C2-210ENST00000480989 TRAF5O00463 557 aa12.31□□□□□ -0.44
GTF3C2-210ENST00000480989 HSPA8P11142 646 aaKnown RBP12.31□□□□□ -0.44
GTF3C2-210ENST00000480989 CST9Q5W186 159 aa12.31□□□□□ -0.44
GTF3C2-210ENST00000480989 RPGRQ92834 1020 aaKnown RBP12.31□□□□□ -0.44
GTF3C2-210ENST00000480989 PRDM10Q9NQV6 1147 aa12.31□□□□□ -0.44
GTF3C2-210ENST00000480989 DDX21Q9NR30 783 aaKnown RBP eCLIP12.31□□□□□ -0.44
GTF3C2-210ENST00000480989 ERBB4Q15303 1308 aa12.31□□□□□ -0.44
GTF3C2-210ENST00000480989 LBX1P52954 281 aa12.3□□□□□ -0.44
GTF3C2-210ENST00000480989 AOC3Q16853 763 aa12.3□□□□□ -0.44
GTF3C2-210ENST00000480989 SLC10A5Q5PT55 438 aa12.3□□□□□ -0.44
GTF3C2-210ENST00000480989 CC2D2BQ6DHV5 1058 aa12.3□□□□□ -0.44
GTF3C2-210ENST00000480989 PNMA8AQ86V59 439 aaPredicted RBP12.3□□□□□ -0.44
GTF3C2-210ENST00000480989 LARGE2Q8N3Y3 721 aa12.3□□□□□ -0.44
GTF3C2-210ENST00000480989 JDP2Q8WYK2 163 aa12.3□□□□□ -0.44
GTF3C2-210ENST00000480989 ZNF428Q96B54 188 aa12.3□□□□□ -0.44
GTF3C2-210ENST00000480989 TSPYL4Q9UJ04 414 aa12.3□□□□□ -0.44
GTF3C2-210ENST00000480989 WDR33Q9C0J8 1336 aaKnown RBP12.3□□□□□ -0.44
GTF3C2-210ENST00000480989 SHTN1A0MZ66 631 aa12.29□□□□□ -0.44
GTF3C2-210ENST00000480989 EIF2S2P20042 333 aaKnown RBP12.29□□□□□ -0.44
GTF3C2-210ENST00000480989 CXCL9Q07325 125 aa12.29□□□□□ -0.44
GTF3C2-210ENST00000480989 DEFB115Q30KQ5 88 aa12.29□□□□□ -0.44
GTF3C2-210ENST00000480989 PPIP5K2O43314 1243 aa12.28□□□□□ -0.44
GTF3C2-210ENST00000480989 HCLS1P14317 486 aaPredicted RBP12.28□□□□□ -0.44
GTF3C2-210ENST00000480989 CTCFP49711 727 aaPredicted RBP12.28□□□□□ -0.44
GTF3C2-210ENST00000480989 EIF6P56537 245 aaKnown RBP12.28□□□□□ -0.44
GTF3C2-210ENST00000480989 NLRP10Q86W26 655 aa12.28□□□□□ -0.44
GTF3C2-210ENST00000480989 NECTIN2Q92692 538 aa12.28□□□□□ -0.44
GTF3C2-210ENST00000480989 RBM17Q96I25 401 aaKnown RBP12.28□□□□□ -0.44
GTF3C2-210ENST00000480989 RTFDC1Q9BY42 306 aaPredicted RBP12.28□□□□□ -0.44
GTF3C2-210ENST00000480989 ATP6V0A2Q9Y487 856 aa12.28□□□□□ -0.44
GTF3C2-210ENST00000480989 YDJCA8MPS7 323 aa12.27□□□□□ -0.45
GTF3C2-210ENST00000480989 TMPOP42166 694 aaKnown RBP12.27□□□□□ -0.45
GTF3C2-210ENST00000480989 HIRAP54198 1017 aaPredicted RBP12.27□□□□□ -0.45
GTF3C2-210ENST00000480989 RIPK4P57078 832 aa12.27□□□□□ -0.45
GTF3C2-210ENST00000480989 PARP10Q53GL7 1025 aa12.27□□□□□ -0.45
GTF3C2-210ENST00000480989 CYP4F22Q6NT55 531 aa12.27□□□□□ -0.45
GTF3C2-210ENST00000480989 COPS6Q7L5N1 327 aa12.27□□□□□ -0.45
GTF3C2-210ENST00000480989 XAGE3Q8WTP9 111 aa12.27□□□□□ -0.45
GTF3C2-210ENST00000480989 UTP14AQ9BVJ6 771 aaKnown RBP12.27□□□□□ -0.45
GTF3C2-210ENST00000480989 GPRC5DQ9NZD1 345 aa12.27□□□□□ -0.45
GTF3C2-210ENST00000480989 MAPK8IP3Q9UPT6 1336 aa12.27□□□□□ -0.45
GTF3C2-210ENST00000480989 SCN9AQ15858 1988 aa12.27□□□□□ -0.45
GTF3C2-210ENST00000480989 DLK2Q6UY11 383 aa12.26□□□□□ -0.45
GTF3C2-210ENST00000480989 PPP1R42Q7Z4L9 355 aa12.26□□□□□ -0.45
GTF3C2-210ENST00000480989 NIM1KQ8IY84 436 aa12.26□□□□□ -0.45
GTF3C2-210ENST00000480989 NLRP3Q96P20 1036 aa12.26□□□□□ -0.45
GTF3C2-210ENST00000480989 ABT1Q9ULW3 272 aaKnown RBP12.26□□□□□ -0.45
GTF3C2-210ENST00000480989 TRIM35Q9UPQ4 493 aa12.26□□□□□ -0.45
GTF3C2-210ENST00000480989 AOC2O75106 756 aa12.25□□□□□ -0.45
GTF3C2-210ENST00000480989 LMOD1P29536 600 aaPredicted RBP12.25□□□□□ -0.45
GTF3C2-210ENST00000480989 GMPSP49915 693 aaPredicted RBP12.25□□□□□ -0.45
GTF3C2-210ENST00000480989 KIAA2012Q0VF49 1180 aa12.25□□□□□ -0.45
GTF3C2-210ENST00000480989 AIMP1Q12904 312 aaKnown RBP12.25□□□□□ -0.45
GTF3C2-210ENST00000480989 USP50Q70EL3 339 aaPredicted RBP12.25□□□□□ -0.45
GTF3C2-210ENST00000480989 CCDC146Q8IYE0 955 aa12.25□□□□□ -0.45
GTF3C2-210ENST00000480989 TRPM4Q8TD43 1214 aa12.25□□□□□ -0.45
GTF3C2-210ENST00000480989 CAPNS2Q96L46 248 aa12.25□□□□□ -0.45
GTF3C2-210ENST00000480989 TLL2Q9Y6L7 1015 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms