RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 H0YIN7 160 aa25.98■■□□□ 1.75
CTSA-206ENST00000480961 YBX3P16989 372 aaKnown RBP eCLIP25.98■■□□□ 1.75
CTSA-206ENST00000480961 PDE6BP35913 854 aa25.98■■□□□ 1.75
CTSA-206ENST00000480961 CT47B1P0C2W7 299 aaPredicted RBP25.97■■□□□ 1.75
CTSA-206ENST00000480961 JARID2Q92833 1246 aaPredicted RBP25.97■■□□□ 1.75
CTSA-206ENST00000480961 DCAF8L1A6NGE4 600 aa25.96■■□□□ 1.75
CTSA-206ENST00000480961 IGKV5-2P06315 115 aa25.96■■□□□ 1.75
CTSA-206ENST00000480961 TRIM28Q13263 835 aaKnown RBP25.96■■□□□ 1.75
CTSA-206ENST00000480961 ALDH1L2Q3SY69 923 aa25.96■■□□□ 1.75
CTSA-206ENST00000480961 DNAAF4Q8WXU2 420 aa25.96■■□□□ 1.75
CTSA-206ENST00000480961 ZNF622Q969S3 477 aaKnown RBP eCLIP25.96■■□□□ 1.757e-8■□□□□ 9.1
CTSA-206ENST00000480961 FAM89AQ96GI7 184 aa25.96■■□□□ 1.75
CTSA-206ENST00000480961 UTRNP46939 3433 aa25.95■■□□□ 1.75
CTSA-206ENST00000480961 HCLS1P14317 486 aaPredicted RBP25.95■■□□□ 1.74
CTSA-206ENST00000480961 RARSP54136 660 aaKnown RBP25.95■■□□□ 1.74
CTSA-206ENST00000480961 CWF19L2Q2TBE0 894 aaKnown RBP25.95■■□□□ 1.74
CTSA-206ENST00000480961 C3orf67Q6ZVT6 689 aa25.95■■□□□ 1.74
CTSA-206ENST00000480961 PIM2Q9P1W9 311 aa25.95■■□□□ 1.74
CTSA-206ENST00000480961 BCS1LQ9Y276 419 aa25.95■■□□□ 1.74
CTSA-206ENST00000480961 IBTKQ9P2D0 1353 aaPredicted RBP25.95■■□□□ 1.74
CTSA-206ENST00000480961 NEXNQ0ZGT2 675 aa25.94■■□□□ 1.74
CTSA-206ENST00000480961 CWC25Q9NXE8 425 aaPredicted RBP25.94■■□□□ 1.74
CTSA-206ENST00000480961 SH3TC1Q8TE82 1336 aa25.92■■□□□ 1.74
CTSA-206ENST00000480961 SRGNP10124 158 aa25.92■■□□□ 1.74
CTSA-206ENST00000480961 DALRD3Q5D0E6 543 aaKnown RBP25.92■■□□□ 1.74
CTSA-206ENST00000480961 SLC4A10Q6U841 1118 aa25.92■■□□□ 1.74
CTSA-206ENST00000480961 CCDC191Q8NCU4 936 aa25.92■■□□□ 1.74
CTSA-206ENST00000480961 KIF13BQ9NQT8 1826 aa25.92■■□□□ 1.74
CTSA-206ENST00000480961 NEURL1BA8MQ27 555 aa25.91■■□□□ 1.74
CTSA-206ENST00000480961 SLC10A5Q5PT55 438 aa25.91■■□□□ 1.74
CTSA-206ENST00000480961 NOB1Q9ULX3 412 aaKnown RBP25.91■■□□□ 1.74
CTSA-206ENST00000480961 N4BP2Q86UW6 1770 aaPredicted RBP25.91■■□□□ 1.74
CTSA-206ENST00000480961 ARFGEF2Q9Y6D5 1785 aa25.91■■□□□ 1.74
CTSA-206ENST00000480961 KIAA1551Q9HCM1 1747 aa25.91■■□□□ 1.74
CTSA-206ENST00000480961 KLRG2A4D1S0 409 aaPredicted RBP25.9■■□□□ 1.74
CTSA-206ENST00000480961 BCAR3O75815 825 aa25.9■■□□□ 1.74
CTSA-206ENST00000480961 ZNF219Q9P2Y4 722 aaPredicted RBP25.89■■□□□ 1.74
CTSA-206ENST00000480961 BEND3Q5T5X7 828 aa25.88■■□□□ 1.73
CTSA-206ENST00000480961 TTLL6Q8N841 843 aa25.88■■□□□ 1.73
CTSA-206ENST00000480961 ZBTB38Q8NAP3 1195 aaPredicted RBP25.88■■□□□ 1.73
CTSA-206ENST00000480961 LINS1Q8NG48 757 aa25.88■■□□□ 1.73
CTSA-206ENST00000480961 MASTLQ96GX5 879 aa25.88■■□□□ 1.73
CTSA-206ENST00000480961 NLRP3Q96P20 1036 aa25.88■■□□□ 1.73
CTSA-206ENST00000480961 PDZRN3Q9UPQ7 1066 aa25.88■■□□□ 1.73
CTSA-206ENST00000480961 RNF123Q5XPI4 1314 aa25.88■■□□□ 1.73
CTSA-206ENST00000480961 ANKRD31Q8N7Z5 1873 aa25.87■■□□□ 1.73
CTSA-206ENST00000480961 IRS4O14654 1257 aaPredicted RBP25.87■■□□□ 1.73
CTSA-206ENST00000480961 NPR1P16066 1061 aa25.87■■□□□ 1.73
CTSA-206ENST00000480961 STYK1Q6J9G0 422 aa25.87■■□□□ 1.73
CTSA-206ENST00000480961 PTPRCP08575 1304 aa25.87■■□□□ 1.73
CTSA-206ENST00000480961 PCCAP05165 728 aaPredicted RBP25.86■■□□□ 1.73
CTSA-206ENST00000480961 GCKRQ14397 625 aa25.86■■□□□ 1.73
CTSA-206ENST00000480961 ANKRD36CQ5JPF3 1778 aa25.86■■□□□ 1.73
CTSA-206ENST00000480961 CRY2Q49AN0 593 aa25.85■■□□□ 1.73
CTSA-206ENST00000480961 RPGRQ92834 1020 aaKnown RBP25.85■■□□□ 1.73
CTSA-206ENST00000480961 GRIN3BO60391 1043 aa25.84■■□□□ 1.73
CTSA-206ENST00000480961 CNKSR1Q969H4 720 aa25.84■■□□□ 1.73
CTSA-206ENST00000480961 TNRC6CQ9HCJ0 1690 aaKnown RBP25.83■■□□□ 1.73
CTSA-206ENST00000480961 UBE3BQ7Z3V4 1068 aa25.83■■□□□ 1.73
CTSA-206ENST00000480961 FRAT1Q92837 279 aaPredicted RBP25.83■■□□□ 1.73
CTSA-206ENST00000480961 RIC1Q4ADV7 1423 aa25.82■■□□□ 1.72
CTSA-206ENST00000480961 H7C1W4 665 aa25.82■■□□□ 1.72
CTSA-206ENST00000480961 BRPF1P55201 1214 aaPredicted RBP25.82■■□□□ 1.72
CTSA-206ENST00000480961 PRPF40BQ6NWY9 871 aaKnown RBP25.82■■□□□ 1.72
CTSA-206ENST00000480961 ARHGAP27Q6ZUM4 889 aa25.82■■□□□ 1.72
CTSA-206ENST00000480961 SRCIN1Q9C0H9 1055 aa25.82■■□□□ 1.72
CTSA-206ENST00000480961 COL11A2P13942 1736 aaPredicted RBP25.81■■□□□ 1.72
CTSA-206ENST00000480961 C21orf2O43822 256 aa25.81■■□□□ 1.72
CTSA-206ENST00000480961 RBM17Q96I25 401 aaKnown RBP25.81■■□□□ 1.72
CTSA-206ENST00000480961 HOXA10P31260 410 aaPredicted RBP25.8■■□□□ 1.72
CTSA-206ENST00000480961 CCDC85AQ96PX6 553 aaPredicted RBP25.8■■□□□ 1.72
CTSA-206ENST00000480961 TNNQ9UQP3 1299 aa25.8■■□□□ 1.72
CTSA-206ENST00000480961 OLFM4Q6UX06 510 aa25.79■■□□□ 1.72
CTSA-206ENST00000480961 SLC51AQ86UW1 340 aa25.79■■□□□ 1.72
CTSA-206ENST00000480961 API5Q9BZZ5 524 aaKnown RBP25.79■■□□□ 1.72
CTSA-206ENST00000480961 ALDH1L1O75891 902 aa25.78■■□□□ 1.72
CTSA-206ENST00000480961 ALDH1B1P30837 517 aa25.78■■□□□ 1.72
CTSA-206ENST00000480961 CASP7P55210 303 aa25.78■■□□□ 1.72
CTSA-206ENST00000480961 KIF16BQ96L93 1317 aa25.78■■□□□ 1.72
CTSA-206ENST00000480961 CACNA1FO60840 1977 aa25.77■■□□□ 1.72
CTSA-206ENST00000480961 PDE8AO60658 829 aa25.77■■□□□ 1.72
CTSA-206ENST00000480961 SF3B3Q15393 1217 aaKnown RBP25.77■■□□□ 1.72
CTSA-206ENST00000480961 CRAMP1Q96RY5 1269 aa25.77■■□□□ 1.72
CTSA-206ENST00000480961 C9orf78Q9NZ63 289 aaPredicted RBP25.77■■□□□ 1.72
CTSA-206ENST00000480961 CDHR2Q9BYE9 1310 aa25.77■■□□□ 1.72
CTSA-206ENST00000480961 DDX46Q7L014 1031 aaKnown RBP25.76■■□□□ 1.71
CTSA-206ENST00000480961 ABCC4O15439 1325 aa25.76■■□□□ 1.71
CTSA-206ENST00000480961 GRM8O00222 908 aa25.75■■□□□ 1.71
CTSA-206ENST00000480961 HSP90B1P14625 803 aaKnown RBP25.75■■□□□ 1.71
CTSA-206ENST00000480961 C7orf43Q8WVR3 580 aa25.75■■□□□ 1.71
CTSA-206ENST00000480961 IPO8O15397 1037 aaKnown RBP25.74■■□□□ 1.71
CTSA-206ENST00000480961 ARHGAP45Q92619 1136 aa25.74■■□□□ 1.71
CTSA-206ENST00000480961 CLUAP1Q96AJ1 413 aa25.74■■□□□ 1.71
CTSA-206ENST00000480961 TRIM27P14373 513 aa25.73■■□□□ 1.71
CTSA-206ENST00000480961 CTSWP56202 376 aa25.73■■□□□ 1.71
CTSA-206ENST00000480961 ATF7IPQ6VMQ6 1270 aa25.73■■□□□ 1.71
CTSA-206ENST00000480961 SEC31BQ9NQW1 1179 aa25.73■■□□□ 1.71
CTSA-206ENST00000480961 PPEF1O14829 653 aaPredicted RBP25.72■■□□□ 1.71
CTSA-206ENST00000480961 NBPF7P0C2Y1 421 aaPredicted RBP25.72■■□□□ 1.71
CTSA-206ENST00000480961 RASSF7Q02833 373 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms