RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 IQCA1LA6NCM1 817 aa13.88□□□□□ -0.19
SMURF1-204ENST00000480055 GNAT3A8MTJ3 354 aa13.88□□□□□ -0.19
SMURF1-204ENST00000480055 SRGNP10124 158 aa13.88□□□□□ -0.19
SMURF1-204ENST00000480055 LDHDQ86WU2 507 aa13.88□□□□□ -0.19
SMURF1-204ENST00000480055 TEX13AQ9BXU3 409 aaPredicted RBP13.88□□□□□ -0.19
SMURF1-204ENST00000480055 TBC1D2BQ9UPU7 963 aa13.88□□□□□ -0.19
SMURF1-204ENST00000480055 CAMTA2O94983 1202 aa13.87□□□□□ -0.19
SMURF1-204ENST00000480055 ST5P78524 1137 aa13.87□□□□□ -0.19
SMURF1-204ENST00000480055 ZNF790Q6PG37 636 aa13.87□□□□□ -0.19
SMURF1-204ENST00000480055 GAS2L2Q8NHY3 880 aa13.87□□□□□ -0.19
SMURF1-204ENST00000480055 MASTLQ96GX5 879 aa13.87□□□□□ -0.19
SMURF1-204ENST00000480055 CTCFP49711 727 aaPredicted RBP13.86□□□□□ -0.19
SMURF1-204ENST00000480055 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
SMURF1-204ENST00000480055 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
SMURF1-204ENST00000480055 SETDB2Q96T68 719 aa13.86□□□□□ -0.19
SMURF1-204ENST00000480055 TAF1DQ9H5J8 278 aaPredicted RBP13.86□□□□□ -0.19
SMURF1-204ENST00000480055 BMP2KQ9NSY1 1161 aaPredicted RBP13.86□□□□□ -0.19
SMURF1-204ENST00000480055 LTBP1Q14766 1721 aa13.86□□□□□ -0.19
SMURF1-204ENST00000480055 CEMIPQ8WUJ3 1361 aa13.85□□□□□ -0.19
SMURF1-204ENST00000480055 TTLL13PA6NNM8 815 aa13.85□□□□□ -0.19
SMURF1-204ENST00000480055 PER1O15534 1290 aaPredicted RBP13.85□□□□□ -0.19
SMURF1-204ENST00000480055 ITGBL1O95965 494 aaPredicted RBP13.85□□□□□ -0.19
SMURF1-204ENST00000480055 VEGFBP49765 207 aa13.85□□□□□ -0.19
SMURF1-204ENST00000480055 IL17REQ8NFR9 667 aa13.85□□□□□ -0.19
SMURF1-204ENST00000480055 C7orf43Q8WVR3 580 aa13.85□□□□□ -0.19
SMURF1-204ENST00000480055 ZNF541Q9H0D2 1346 aa13.85□□□□□ -0.19
SMURF1-204ENST00000480055 TMEM88BA6NKF7 163 aa13.84□□□□□ -0.19
SMURF1-204ENST00000480055 BTBD11A6QL63 1104 aa13.84□□□□□ -0.19
SMURF1-204ENST00000480055 A1BGP04217 495 aa13.84□□□□□ -0.19
SMURF1-204ENST00000480055 CCDC93Q567U6 631 aa13.84□□□□□ -0.19
SMURF1-204ENST00000480055 AIDAQ96BJ3 306 aa13.84□□□□□ -0.19
SMURF1-204ENST00000480055 DLG5Q8TDM6 1919 aa13.84□□□□□ -0.19
SMURF1-204ENST00000480055 DZIP3Q86Y13 1208 aaKnown RBP13.83□□□□□ -0.2
SMURF1-204ENST00000480055 HS6ST3Q8IZP7 471 aa13.83□□□□□ -0.2
SMURF1-204ENST00000480055 WBP1LQ9NX94 342 aa13.83□□□□□ -0.2
SMURF1-204ENST00000480055 SNED1Q8TER0 1413 aa13.82□□□□□ -0.2
SMURF1-204ENST00000480055 RASSF10A6NK89 507 aa13.82□□□□□ -0.2
SMURF1-204ENST00000480055 FKBP4Q02790 459 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMURF1-204ENST00000480055 CFAP53Q96M91 514 aa13.82□□□□□ -0.2
SMURF1-204ENST00000480055 HACL1Q9UJ83 578 aa13.82□□□□□ -0.2
SMURF1-204ENST00000480055 KDM3BQ7LBC6 1761 aa13.81□□□□□ -0.2
SMURF1-204ENST00000480055 KLRG2A4D1S0 409 aaPredicted RBP13.81□□□□□ -0.2
SMURF1-204ENST00000480055 NPR1P16066 1061 aa13.81□□□□□ -0.2
SMURF1-204ENST00000480055 LBX1P52954 281 aa13.81□□□□□ -0.2
SMURF1-204ENST00000480055 EAPPQ56P03 285 aaPredicted RBP13.81□□□□□ -0.2
SMURF1-204ENST00000480055 CLEC4GQ6UXB4 293 aa13.81□□□□□ -0.2
SMURF1-204ENST00000480055 COL4A5P29400 1685 aa13.81□□□□□ -0.2
SMURF1-204ENST00000480055 ATMINO43313 823 aaPredicted RBP13.8□□□□□ -0.2
SMURF1-204ENST00000480055 KCNQ3O43525 872 aa13.8□□□□□ -0.2
SMURF1-204ENST00000480055 SLC34A2O95436 690 aa13.8□□□□□ -0.2
SMURF1-204ENST00000480055 PRKAR2BP31323 418 aa13.8□□□□□ -0.2
SMURF1-204ENST00000480055 EPHX2P34913 555 aa13.8□□□□□ -0.2
SMURF1-204ENST00000480055 PIP4K2AP48426 406 aaPredicted RBP13.8□□□□□ -0.2
SMURF1-204ENST00000480055 NBPF5PQ86XG9 351 aaPredicted RBP13.8□□□□□ -0.2
SMURF1-204ENST00000480055 RTF1Q92541 710 aaKnown RBP13.8□□□□□ -0.2
SMURF1-204ENST00000480055 ZNF277Q9NRM2 450 aaPredicted RBP13.8□□□□□ -0.2
SMURF1-204ENST00000480055 HSPA8P11142 646 aaKnown RBP13.79□□□□□ -0.2
SMURF1-204ENST00000480055 PNMA8AQ86V59 439 aaPredicted RBP13.79□□□□□ -0.2
SMURF1-204ENST00000480055 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
SMURF1-204ENST00000480055 NUDCQ9Y266 331 aa13.79□□□□□ -0.2
SMURF1-204ENST00000480055 ZNF652Q9Y2D9 606 aa13.79□□□□□ -0.2
SMURF1-204ENST00000480055 USP16Q9Y5T5 823 aa13.79□□□□□ -0.2
SMURF1-204ENST00000480055 RNF123Q5XPI4 1314 aa13.79□□□□□ -0.2
SMURF1-204ENST00000480055 FZD9O00144 591 aa13.78□□□□□ -0.2
SMURF1-204ENST00000480055 ATN1P54259 1190 aaPredicted RBP13.78□□□□□ -0.2
SMURF1-204ENST00000480055 ASTLQ6HA08 431 aaPredicted RBP13.78□□□□□ -0.2
SMURF1-204ENST00000480055 OLFM4Q6UX06 510 aa13.78□□□□□ -0.2
SMURF1-204ENST00000480055 RTKN2Q8IZC4 609 aa13.78□□□□□ -0.2
SMURF1-204ENST00000480055 ABHD8Q96I13 439 aa13.78□□□□□ -0.2
SMURF1-204ENST00000480055 TRIM35Q9UPQ4 493 aa13.78□□□□□ -0.2
SMURF1-204ENST00000480055 NPC1L1Q9UHC9 1359 aa13.78□□□□□ -0.2
SMURF1-204ENST00000480055 LAMB2P55268 1798 aa13.78□□□□□ -0.2
SMURF1-204ENST00000480055 FAM177BA6PVY3 158 aa13.77□□□□□ -0.21
SMURF1-204ENST00000480055 SNRPA1P09661 255 aaKnown RBP13.77□□□□□ -0.21
SMURF1-204ENST00000480055 U2AF1L5P0DN76 240 aaPredicted RBP13.77□□□□□ -0.21
SMURF1-204ENST00000480055 IARSP41252 1262 aaKnown RBP13.77□□□□□ -0.21
SMURF1-204ENST00000480055 U2AF1Q01081 240 aaKnown RBP eCLIP13.77□□□□□ -0.21
SMURF1-204ENST00000480055 MKRN3Q13064 507 aaKnown RBP13.77□□□□□ -0.21
SMURF1-204ENST00000480055 DEFB115Q30KQ5 88 aa13.77□□□□□ -0.21
SMURF1-204ENST00000480055 MAP1SQ66K74 1059 aaPredicted RBP13.77□□□□□ -0.21
SMURF1-204ENST00000480055 MCM10Q7L590 875 aa13.77□□□□□ -0.21
SMURF1-204ENST00000480055 CNTROBQ8N137 903 aa13.77□□□□□ -0.21
SMURF1-204ENST00000480055 GPC2Q8N158 579 aa13.77□□□□□ -0.21
SMURF1-204ENST00000480055 WDR33Q9C0J8 1336 aaKnown RBP13.77□□□□□ -0.21
SMURF1-204ENST00000480055 CASP8AP2Q9UKL3 1982 aa13.77□□□□□ -0.21
SMURF1-204ENST00000480055 ANKRD36CQ5JPF3 1778 aa13.76□□□□□ -0.21
SMURF1-204ENST00000480055 RIC1Q4ADV7 1423 aa13.76□□□□□ -0.21
SMURF1-204ENST00000480055 PRAMEF22A3QJZ6 481 aa13.76□□□□□ -0.21
SMURF1-204ENST00000480055 GTF2E1P29083 439 aaPredicted RBP13.76□□□□□ -0.21
SMURF1-204ENST00000480055 MAP2K1Q02750 393 aaPredicted RBP13.76□□□□□ -0.21
SMURF1-204ENST00000480055 TPTE2Q6XPS3 522 aa13.76□□□□□ -0.21
SMURF1-204ENST00000480055 RSPH6AQ9H0K4 717 aa13.76□□□□□ -0.21
SMURF1-204ENST00000480055 FAM161AQ3B820 660 aa13.75□□□□□ -0.21
SMURF1-204ENST00000480055 PSMD1Q99460 953 aa13.75□□□□□ -0.21
SMURF1-204ENST00000480055 NIP7Q9Y221 180 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMURF1-204ENST00000480055 ABCC12Q96J65 1359 aa13.74□□□□□ -0.21
SMURF1-204ENST00000480055 ALDH1B1P30837 517 aa13.74□□□□□ -0.21
SMURF1-204ENST00000480055 SYNE4Q8N205 404 aa13.74□□□□□ -0.21
SMURF1-204ENST00000480055 DDX21Q9NR30 783 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMURF1-204ENST00000480055 ABT1Q9ULW3 272 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms