RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 RBM17Q96I25 401 aaKnown RBP19.54■□□□□ 0.72
PRKN-207ENST00000479615 NLRP3Q96P20 1036 aa19.54■□□□□ 0.72
PRKN-207ENST00000479615 RRAGCQ9HB90 399 aa19.54■□□□□ 0.72
PRKN-207ENST00000479615 MBIPQ9NS73 344 aa19.54■□□□□ 0.72
PRKN-207ENST00000479615 FKBP4Q02790 459 aaKnown RBP eCLIP19.53■□□□□ 0.72
PRKN-207ENST00000479615 TCIRG1Q13488 830 aa19.53■□□□□ 0.72
PRKN-207ENST00000479615 CCDC27Q2M243 656 aa19.53■□□□□ 0.72
PRKN-207ENST00000479615 DUSP27Q5VZP5 1158 aa19.53■□□□□ 0.72
PRKN-207ENST00000479615 COL11A2P13942 1736 aaPredicted RBP19.53■□□□□ 0.72
PRKN-207ENST00000479615 APLP1P51693 650 aa19.52■□□□□ 0.72
PRKN-207ENST00000479615 AIMP1Q12904 312 aaKnown RBP19.52■□□□□ 0.72
PRKN-207ENST00000479615 PLBD2Q8NHP8 589 aa19.52■□□□□ 0.72
PRKN-207ENST00000479615 NECTIN2Q92692 538 aa19.52■□□□□ 0.72
PRKN-207ENST00000479615 CRAMP1Q96RY5 1269 aa19.52■□□□□ 0.72
PRKN-207ENST00000479615 TMX4Q9H1E5 349 aaPredicted RBP19.52■□□□□ 0.72
PRKN-207ENST00000479615 CHPF2Q9P2E5 772 aa19.52■□□□□ 0.72
PRKN-207ENST00000479615 NUP98P52948 1817 aa19.51■□□□□ 0.71
PRKN-207ENST00000479615 ANXA1P04083 346 aa19.51■□□□□ 0.71
PRKN-207ENST00000479615 KRT24Q2M2I5 525 aa19.51■□□□□ 0.71
PRKN-207ENST00000479615 ANKRD13DQ6ZTN6 518 aa19.51■□□□□ 0.71
PRKN-207ENST00000479615 ABCC12Q96J65 1359 aa19.5■□□□□ 0.71
PRKN-207ENST00000479615 SLX4Q8IY92 1834 aa19.49■□□□□ 0.71
PRKN-207ENST00000479615 NLRP10Q86W26 655 aa19.49■□□□□ 0.71
PRKN-207ENST00000479615 SMC1BQ8NDV3 1235 aa19.49■□□□□ 0.71
PRKN-207ENST00000479615 PSMD1Q99460 953 aa19.49■□□□□ 0.71
PRKN-207ENST00000479615 FER1L6Q2WGJ9 1857 aa19.49■□□□□ 0.71
PRKN-207ENST00000479615 ARFGEF2Q9Y6D5 1785 aa19.49■□□□□ 0.71
PRKN-207ENST00000479615 SH3TC1Q8TE82 1336 aa19.49■□□□□ 0.71
PRKN-207ENST00000479615 MRS2Q9HD23 443 aa19.48■□□□□ 0.71
PRKN-207ENST00000479615 TNRC6CQ9HCJ0 1690 aaKnown RBP19.48■□□□□ 0.71
PRKN-207ENST00000479615 TRMT112Q9UI30 125 aaKnown RBP19.47■□□□□ 0.71
PRKN-207ENST00000479615 BBOX1O75936 387 aa19.46■□□□□ 0.71
PRKN-207ENST00000479615 HSP90B1P14625 803 aaKnown RBP19.46■□□□□ 0.71
PRKN-207ENST00000479615 TRIM28Q13263 835 aaKnown RBP19.46■□□□□ 0.71
PRKN-207ENST00000479615 CCDC30Q5VVM6 783 aa19.46■□□□□ 0.71
PRKN-207ENST00000479615 VPS33BQ9H267 617 aa19.46■□□□□ 0.71
PRKN-207ENST00000479615 IQCA1LA6NCM1 817 aa19.45■□□□□ 0.7
PRKN-207ENST00000479615 IARSP41252 1262 aaKnown RBP19.45■□□□□ 0.7
PRKN-207ENST00000479615 GOLGA2Q08379 1002 aa19.45■□□□□ 0.7
PRKN-207ENST00000479615 SYNE4Q8N205 404 aa19.45■□□□□ 0.7
PRKN-207ENST00000479615 IL16Q14005 1332 aa19.45■□□□□ 0.7
PRKN-207ENST00000479615 PPEF1O14829 653 aaPredicted RBP19.44■□□□□ 0.7
PRKN-207ENST00000479615 CCDC184Q52MB2 194 aa19.44■□□□□ 0.7
PRKN-207ENST00000479615 TMC4Q7Z404 712 aa19.44■□□□□ 0.7
PRKN-207ENST00000479615 WWC1Q8IX03 1113 aa19.44■□□□□ 0.7
PRKN-207ENST00000479615 JDP2Q8WYK2 163 aa19.44■□□□□ 0.7
PRKN-207ENST00000479615 ISCA1Q9BUE6 129 aa19.44■□□□□ 0.7
PRKN-207ENST00000479615 ZNF277Q9NRM2 450 aaPredicted RBP19.44■□□□□ 0.7
PRKN-207ENST00000479615 DDX58O95786 925 aaKnown RBP19.43■□□□□ 0.7
PRKN-207ENST00000479615 RIC3Q7Z5B4 369 aa19.43■□□□□ 0.7
PRKN-207ENST00000479615 L3MBTL3Q96JM7 780 aaPredicted RBP19.43■□□□□ 0.7
PRKN-207ENST00000479615 DDX46Q7L014 1031 aaKnown RBP19.42■□□□□ 0.7
PRKN-207ENST00000479615 SUPT20HQ8NEM7 779 aa19.42■□□□□ 0.7
PRKN-207ENST00000479615 ATP6V0A2Q9Y487 856 aa19.42■□□□□ 0.7
PRKN-207ENST00000479615 DICER1Q9UPY3 1922 aaKnown RBP19.42■□□□□ 0.7
PRKN-207ENST00000479615 POTECB2RU33 542 aa19.41■□□□□ 0.7
PRKN-207ENST00000479615 FZD9O00144 591 aa19.41■□□□□ 0.7
PRKN-207ENST00000479615 ELL2O00472 640 aaPredicted RBP19.41■□□□□ 0.7
PRKN-207ENST00000479615 DDNO94850 711 aaPredicted RBP19.41■□□□□ 0.7
PRKN-207ENST00000479615 OLFM4Q6UX06 510 aa19.41■□□□□ 0.7
PRKN-207ENST00000479615 TIAM2Q8IVF5 1701 aa19.41■□□□□ 0.7
PRKN-207ENST00000479615 WDR90Q96KV7 1748 aa19.41■□□□□ 0.7
PRKN-207ENST00000479615 HCLS1P14317 486 aaPredicted RBP19.4■□□□□ 0.7
PRKN-207ENST00000479615 C3orf67Q6ZVT6 689 aa19.4■□□□□ 0.7
PRKN-207ENST00000479615 SP8Q8IXZ3 490 aa19.4■□□□□ 0.7
PRKN-207ENST00000479615 C8orf58Q8NAV2 365 aa19.4■□□□□ 0.7
PRKN-207ENST00000479615 STK31Q9BXU1 1019 aa19.4■□□□□ 0.7
PRKN-207ENST00000479615 SNED1Q8TER0 1413 aa19.4■□□□□ 0.7
PRKN-207ENST00000479615 CCDC88AQ3V6T2 1871 aa19.39■□□□□ 0.7
PRKN-207ENST00000479615 GRAPQ13588 217 aa19.39■□□□□ 0.69
PRKN-207ENST00000479615 WDR63Q8IWG1 891 aa19.39■□□□□ 0.69
PRKN-207ENST00000479615 GPC2Q8N158 579 aa19.39■□□□□ 0.69
PRKN-207ENST00000479615 GRAPLQ8TC17 118 aaPredicted RBP19.39■□□□□ 0.69
PRKN-207ENST00000479615 ABCC4O15439 1325 aa19.39■□□□□ 0.69
PRKN-207ENST00000479615 EIF6P56537 245 aaKnown RBP19.38■□□□□ 0.69
PRKN-207ENST00000479615 SF3B3Q15393 1217 aaKnown RBP19.38■□□□□ 0.69
PRKN-207ENST00000479615 LARGE2Q8N3Y3 721 aa19.38■□□□□ 0.69
PRKN-207ENST00000479615 CCDC191Q8NCU4 936 aa19.38■□□□□ 0.69
PRKN-207ENST00000479615 CACNA1SQ13698 1873 aa19.37■□□□□ 0.69
PRKN-207ENST00000479615 ATP5J2-PTCD1G3V325 749 aa19.37■□□□□ 0.69
PRKN-207ENST00000479615 ZBTB38Q8NAP3 1195 aaPredicted RBP19.37■□□□□ 0.69
PRKN-207ENST00000479615 FAM89AQ96GI7 184 aa19.37■□□□□ 0.69
PRKN-207ENST00000479615 RTFDC1Q9BY42 306 aaPredicted RBP19.37■□□□□ 0.69
PRKN-207ENST00000479615 PHAXQ9H814 394 aaKnown RBP19.37■□□□□ 0.69
PRKN-207ENST00000479615 ANKRD36CQ5JPF3 1778 aa19.37■□□□□ 0.69
PRKN-207ENST00000479615 PNMA8AQ86V59 439 aaPredicted RBP19.36■□□□□ 0.69
PRKN-207ENST00000479615 TCERG1O14776 1098 aaKnown RBP19.35■□□□□ 0.69
PRKN-207ENST00000479615 TWISTNBQ3B726 338 aaPredicted RBP19.35■□□□□ 0.69
PRKN-207ENST00000479615 CHADLQ6NUI6 762 aa19.35■□□□□ 0.69
PRKN-207ENST00000479615 DPP8Q6V1X1 898 aaPredicted RBP19.35■□□□□ 0.69
PRKN-207ENST00000479615 NIM1KQ8IY84 436 aa19.35■□□□□ 0.69
PRKN-207ENST00000479615 MPNDQ8N594 471 aa19.35■□□□□ 0.69
PRKN-207ENST00000479615 TSR2Q969E8 191 aaKnown RBP19.35■□□□□ 0.69
PRKN-207ENST00000479615 METTL22Q9BUU2 404 aaPredicted RBP19.35■□□□□ 0.69
PRKN-207ENST00000479615 HACL1Q9UJ83 578 aa19.35■□□□□ 0.69
PRKN-207ENST00000479615 IRS4O14654 1257 aaPredicted RBP19.34■□□□□ 0.69
PRKN-207ENST00000479615 KSR2Q6VAB6 950 aa19.34■□□□□ 0.69
PRKN-207ENST00000479615 LDHDQ86WU2 507 aa19.34■□□□□ 0.69
PRKN-207ENST00000479615 DNAJC5GQ8N7S2 189 aa19.34■□□□□ 0.69
PRKN-207ENST00000479615 TSPYL6Q8N831 410 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms