RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 OLFM4Q6UX06 510 aa18.68■□□□□ 0.58
ATG4B-218ENST00000479554 COPS6Q7L5N1 327 aa18.68■□□□□ 0.58
ATG4B-218ENST00000479554 XAGE3Q8WTP9 111 aa18.68■□□□□ 0.58
ATG4B-218ENST00000479554 DDX21Q9NR30 783 aaKnown RBP eCLIP18.68■□□□□ 0.58
ATG4B-218ENST00000479554 HOXB7P09629 217 aa18.67■□□□□ 0.58
ATG4B-218ENST00000479554 HDGFL1Q5TGJ6 251 aa18.67■□□□□ 0.58
ATG4B-218ENST00000479554 CFAP44Q96MT7 982 aa18.67■□□□□ 0.58
ATG4B-218ENST00000479554 HOXA10P31260 410 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-218ENST00000479554 HSP90AB3PQ58FF7 597 aa18.66■□□□□ 0.58
ATG4B-218ENST00000479554 UTP14AQ9BVJ6 771 aaKnown RBP18.66■□□□□ 0.58
ATG4B-218ENST00000479554 ZNF277Q9NRM2 450 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-218ENST00000479554 POTECB2RU33 542 aa18.65■□□□□ 0.58
ATG4B-218ENST00000479554 APAF1O14727 1248 aa18.65■□□□□ 0.58
ATG4B-218ENST00000479554 DDNO94850 711 aaPredicted RBP18.65■□□□□ 0.58
ATG4B-218ENST00000479554 RBM17Q96I25 401 aaKnown RBP18.65■□□□□ 0.58
ATG4B-218ENST00000479554 CHPF2Q9P2E5 772 aa18.65■□□□□ 0.58
ATG4B-218ENST00000479554 RNF123Q5XPI4 1314 aa18.65■□□□□ 0.58
ATG4B-218ENST00000479554 CC2D2BQ6DHV5 1058 aa18.64■□□□□ 0.57
ATG4B-218ENST00000479554 NLRP3Q96P20 1036 aa18.64■□□□□ 0.57
ATG4B-218ENST00000479554 MBIPQ9NS73 344 aa18.64■□□□□ 0.57
ATG4B-218ENST00000479554 SNED1Q8TER0 1413 aa18.64■□□□□ 0.57
ATG4B-218ENST00000479554 PPEF1O14829 653 aaPredicted RBP18.63■□□□□ 0.57
ATG4B-218ENST00000479554 IARSP41252 1262 aaKnown RBP18.63■□□□□ 0.57
ATG4B-218ENST00000479554 CALD1Q05682 793 aaKnown RBP18.63■□□□□ 0.57
ATG4B-218ENST00000479554 C3orf67Q6ZVT6 689 aa18.63■□□□□ 0.57
ATG4B-218ENST00000479554 SYNE4Q8N205 404 aa18.63■□□□□ 0.57
ATG4B-218ENST00000479554 CRAMP1Q96RY5 1269 aa18.63■□□□□ 0.57
ATG4B-218ENST00000479554 PSMD1Q99460 953 aa18.63■□□□□ 0.57
ATG4B-218ENST00000479554 HTRA3P83110 453 aa18.62■□□□□ 0.57
ATG4B-218ENST00000479554 TCIRG1Q13488 830 aa18.62■□□□□ 0.57
ATG4B-218ENST00000479554 DUSP27Q5VZP5 1158 aa18.62■□□□□ 0.57
ATG4B-218ENST00000479554 NLRP10Q86W26 655 aa18.62■□□□□ 0.57
ATG4B-218ENST00000479554 DNAJC5GQ8N7S2 189 aa18.62■□□□□ 0.57
ATG4B-218ENST00000479554 DBF4Q9UBU7 674 aaPredicted RBP18.62■□□□□ 0.57
ATG4B-218ENST00000479554 ZNF541Q9H0D2 1346 aa18.61■□□□□ 0.57
ATG4B-218ENST00000479554 IQCA1LA6NCM1 817 aa18.61■□□□□ 0.57
ATG4B-218ENST00000479554 SLC10A5Q5PT55 438 aa18.61■□□□□ 0.57
ATG4B-218ENST00000479554 IFT57Q9NWB7 429 aa18.61■□□□□ 0.57
ATG4B-218ENST00000479554 ZNF853P0CG23 659 aa18.6■□□□□ 0.57
ATG4B-218ENST00000479554 GNAI1P63096 354 aa18.6■□□□□ 0.57
ATG4B-218ENST00000479554 GRIPAP1Q4V328 841 aa18.6■□□□□ 0.57
ATG4B-218ENST00000479554 PLBD2Q8NHP8 589 aa18.6■□□□□ 0.57
ATG4B-218ENST00000479554 L3MBTL3Q96JM7 780 aaPredicted RBP18.6■□□□□ 0.57
ATG4B-218ENST00000479554 TRMT112Q9UI30 125 aaKnown RBP18.6■□□□□ 0.57
ATG4B-218ENST00000479554 LAMB2P55268 1798 aa18.6■□□□□ 0.57
ATG4B-218ENST00000479554 SH3TC1Q8TE82 1336 aa18.59■□□□□ 0.57
ATG4B-218ENST00000479554 SCN4AP35499 1836 aa18.59■□□□□ 0.57
ATG4B-218ENST00000479554 TCERG1O14776 1098 aaKnown RBP18.59■□□□□ 0.57
ATG4B-218ENST00000479554 JDP2Q8WYK2 163 aa18.59■□□□□ 0.57
ATG4B-218ENST00000479554 HYPKQ9NX55 129 aa18.59■□□□□ 0.57
ATG4B-218ENST00000479554 ABCC4O15439 1325 aa18.58■□□□□ 0.57
ATG4B-218ENST00000479554 FZD9O00144 591 aa18.58■□□□□ 0.56
ATG4B-218ENST00000479554 HCLS1P14317 486 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-218ENST00000479554 ANKRD13DQ6ZTN6 518 aa18.58■□□□□ 0.56
ATG4B-218ENST00000479554 KLRG1Q96E93 195 aa18.58■□□□□ 0.56
ATG4B-218ENST00000479554 TMX4Q9H1E5 349 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-218ENST00000479554 CHADLQ6NUI6 762 aa18.57■□□□□ 0.56
ATG4B-218ENST00000479554 SLC51AQ86UW1 340 aa18.57■□□□□ 0.56
ATG4B-218ENST00000479554 POTEIP0CG38 1075 aa18.56■□□□□ 0.56
ATG4B-218ENST00000479554 POTEJP0CG39 1038 aa18.56■□□□□ 0.56
ATG4B-218ENST00000479554 CCDC184Q52MB2 194 aa18.56■□□□□ 0.56
ATG4B-218ENST00000479554 TAF1DQ9H5J8 278 aaPredicted RBP18.56■□□□□ 0.56
ATG4B-218ENST00000479554 ATP6V0A2Q9Y487 856 aa18.56■□□□□ 0.56
ATG4B-218ENST00000479554 COL4A5P29400 1685 aa18.56■□□□□ 0.56
ATG4B-218ENST00000479554 ELL2O00472 640 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-218ENST00000479554 EIF6P56537 245 aaKnown RBP18.55■□□□□ 0.56
ATG4B-218ENST00000479554 DDX46Q7L014 1031 aaKnown RBP18.55■□□□□ 0.56
ATG4B-218ENST00000479554 GPC2Q8N158 579 aa18.55■□□□□ 0.56
ATG4B-218ENST00000479554 LARGE2Q8N3Y3 721 aa18.55■□□□□ 0.56
ATG4B-218ENST00000479554 ZNF428Q96B54 188 aa18.55■□□□□ 0.56
ATG4B-218ENST00000479554 ISCA1Q9BUE6 129 aa18.55■□□□□ 0.56
ATG4B-218ENST00000479554 HACL1Q9UJ83 578 aa18.55■□□□□ 0.56
ATG4B-218ENST00000479554 DDX60Q8IY21 1712 aaKnown RBP18.54■□□□□ 0.56
ATG4B-218ENST00000479554 ATP5J2-PTCD1G3V325 749 aa18.54■□□□□ 0.56
ATG4B-218ENST00000479554 GOLGA2Q08379 1002 aa18.54■□□□□ 0.56
ATG4B-218ENST00000479554 LDHDQ86WU2 507 aa18.54■□□□□ 0.56
ATG4B-218ENST00000479554 BBOX1O75936 387 aa18.53■□□□□ 0.56
ATG4B-218ENST00000479554 NIM1KQ8IY84 436 aa18.53■□□□□ 0.56
ATG4B-218ENST00000479554 PCNTO95613 3336 aa18.52■□□□□ 0.56
ATG4B-218ENST00000479554 PPIP5K2O43314 1243 aa18.52■□□□□ 0.56
ATG4B-218ENST00000479554 GRAPQ13588 217 aa18.52■□□□□ 0.56
ATG4B-218ENST00000479554 EAPPQ56P03 285 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-218ENST00000479554 RIC3Q7Z5B4 369 aa18.52■□□□□ 0.56
ATG4B-218ENST00000479554 C8orf58Q8NAV2 365 aa18.52■□□□□ 0.56
ATG4B-218ENST00000479554 SUPT20HQ8NEM7 779 aa18.52■□□□□ 0.56
ATG4B-218ENST00000479554 GRAPLQ8TC17 118 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-218ENST00000479554 GJA3Q9Y6H8 435 aa18.52■□□□□ 0.56
ATG4B-218ENST00000479554 EPHX2P34913 555 aa18.51■□□□□ 0.55
ATG4B-218ENST00000479554 AOC3Q16853 763 aa18.51■□□□□ 0.55
ATG4B-218ENST00000479554 DPP8Q6V1X1 898 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-218ENST00000479554 SP8Q8IXZ3 490 aa18.51■□□□□ 0.55
ATG4B-218ENST00000479554 JMYQ8N9B5 988 aa18.51■□□□□ 0.55
ATG4B-218ENST00000479554 FAM89AQ96GI7 184 aa18.51■□□□□ 0.55
ATG4B-218ENST00000479554 CHMP4AQ9BY43 222 aa18.51■□□□□ 0.55
ATG4B-218ENST00000479554 VPS33BQ9H267 617 aa18.51■□□□□ 0.55
ATG4B-218ENST00000479554 PHAXQ9H814 394 aaKnown RBP18.51■□□□□ 0.55
ATG4B-218ENST00000479554 ADAMTSL1Q8N6G6 1762 aa18.5■□□□□ 0.55
ATG4B-218ENST00000479554 ANP32CO43423 234 aa18.5■□□□□ 0.55
ATG4B-218ENST00000479554 TRIM28Q13263 835 aaKnown RBP18.5■□□□□ 0.55
ATG4B-218ENST00000479554 PNMA8AQ86V59 439 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms