RNA–Protein interactions for RNA: ENST00000479092.5

PTPN7-211, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-211ENST00000479092 KIF13BQ9NQT8 1826 aa15.12■□□□□ 0.01
PTPN7-211ENST00000479092 ABCC12Q96J65 1359 aa15.11■□□□□ 0.01
PTPN7-211ENST00000479092 RIC1Q4ADV7 1423 aa15.11■□□□□ 0.01
PTPN7-211ENST00000479092 TRIM28Q13263 835 aaKnown RBP15.11■□□□□ 0.01
PTPN7-211ENST00000479092 CCDC191Q8NCU4 936 aa15.11■□□□□ 0.01
PTPN7-211ENST00000479092 CWC25Q9NXE8 425 aaPredicted RBP15.11■□□□□ 0.01
PTPN7-211ENST00000479092 GOLGB1Q14789 3259 aaKnown RBP15.11■□□□□ 0.01
PTPN7-211ENST00000479092 SH3TC1Q8TE82 1336 aa15.11■□□□□ 0.01
PTPN7-211ENST00000479092 CACNA1FO60840 1977 aa15.11■□□□□ 0.01
PTPN7-211ENST00000479092 ERFEQ4G0M1 354 aa15.1■□□□□ 0.01
PTPN7-211ENST00000479092 PELP1Q8IZL8 1130 aaKnown RBP15.1■□□□□ 0.01
PTPN7-211ENST00000479092 F6X3S4 739 aa15.09■□□□□ 0.01
PTPN7-211ENST00000479092 H0YIN7 160 aa15.09■□□□□ 0.01
PTPN7-211ENST00000479092 HSP90B1P14625 803 aaKnown RBP15.09■□□□□ 0.01
PTPN7-211ENST00000479092 DPEP1P16444 411 aa15.09■□□□□ 0.01
PTPN7-211ENST00000479092 CHRNA5P30532 468 aa15.09■□□□□ 0.01
PTPN7-211ENST00000479092 SLC4A10Q6U841 1118 aa15.09■□□□□ 0.01
PTPN7-211ENST00000479092 C2CD5Q86YS7 1000 aa15.09■□□□□ 0.01
PTPN7-211ENST00000479092 LINS1Q8NG48 757 aa15.09■□□□□ 0.01
PTPN7-211ENST00000479092 A0A0G2JLW4 131 aa15.08■□□□□ 0
PTPN7-211ENST00000479092 NEURL1BA8MQ27 555 aa15.08■□□□□ 0
PTPN7-211ENST00000479092 IGKV5-2P06315 115 aa15.08■□□□□ 0
PTPN7-211ENST00000479092 BRPF1P55201 1214 aaPredicted RBP15.08■□□□□ 0
PTPN7-211ENST00000479092 CWF19L2Q2TBE0 894 aaKnown RBP15.08■□□□□ 0
PTPN7-211ENST00000479092 API5Q9BZZ5 524 aaKnown RBP15.08■□□□□ 0
PTPN7-211ENST00000479092 KIAA1551Q9HCM1 1747 aa15.08■□□□□ 0
PTPN7-211ENST00000479092 TNRC6CQ9HCJ0 1690 aaKnown RBP15.07■□□□□ 0
PTPN7-211ENST00000479092 ZBTB38Q8NAP3 1195 aaPredicted RBP15.07■□□□□ 0
PTPN7-211ENST00000479092 FAM89AQ96GI7 184 aa15.07■□□□□ 0
PTPN7-211ENST00000479092 WWC3Q9ULE0 1092 aa15.07■□□□□ 0
PTPN7-211ENST00000479092 NOB1Q9ULX3 412 aaKnown RBP15.07■□□□□ 0
PTPN7-211ENST00000479092 IPO8O15397 1037 aaKnown RBP15.06■□□□□ 0
PTPN7-211ENST00000479092 PCCAP05165 728 aaPredicted RBP15.06■□□□□ 0
PTPN7-211ENST00000479092 GPR162Q16538 588 aa15.06■□□□□ 0
PTPN7-211ENST00000479092 RTL5Q5HYW3 569 aaPredicted RBP15.06■□□□□ 0
PTPN7-211ENST00000479092 RPGRQ92834 1020 aaKnown RBP15.06■□□□□ 0
PTPN7-211ENST00000479092 FRAT1Q92837 279 aaPredicted RBP15.06■□□□□ 0
PTPN7-211ENST00000479092 NLRP3Q96P20 1036 aa15.06■□□□□ 0
PTPN7-211ENST00000479092 SRCIN1Q9C0H9 1055 aa15.06■□□□□ 0
PTPN7-211ENST00000479092 PIM2Q9P1W9 311 aa15.06■□□□□ 0
PTPN7-211ENST00000479092 COL11A2P13942 1736 aaPredicted RBP15.06■□□□□ 0
PTPN7-211ENST00000479092 N4BP2Q86UW6 1770 aaPredicted RBP15.06■□□□□ 0
PTPN7-211ENST00000479092 ANKRD31Q8N7Z5 1873 aa15.06■□□□□ 0
PTPN7-211ENST00000479092 IRS4O14654 1257 aaPredicted RBP15.05■□□□□ -0
PTPN7-211ENST00000479092 BCAR3O75815 825 aa15.05■□□□□ -0
PTPN7-211ENST00000479092 HCLS1P14317 486 aaPredicted RBP15.05■□□□□ -0
PTPN7-211ENST00000479092 DALRD3Q5D0E6 543 aaKnown RBP15.05■□□□□ -0
PTPN7-211ENST00000479092 BEND3Q5T5X7 828 aa15.05■□□□□ -0
PTPN7-211ENST00000479092 ZNF622Q969S3 477 aaKnown RBP eCLIP15.05■□□□□ -01e-6■□□□□ 10.3
PTPN7-211ENST00000479092 MASTLQ96GX5 879 aa15.05■□□□□ -0
PTPN7-211ENST00000479092 BCS1LQ9Y276 419 aa15.05■□□□□ -0
PTPN7-211ENST00000479092 ALDH1L1O75891 902 aa15.04■□□□□ -0
PTPN7-211ENST00000479092 SRGNP10124 158 aa15.04■□□□□ -0
PTPN7-211ENST00000479092 NPR1P16066 1061 aa15.04■□□□□ -0
PTPN7-211ENST00000479092 GCKRQ14397 625 aa15.04■□□□□ -0
PTPN7-211ENST00000479092 SLC10A5Q5PT55 438 aa15.04■□□□□ -0
PTPN7-211ENST00000479092 STYK1Q6J9G0 422 aa15.04■□□□□ -0
PTPN7-211ENST00000479092 TTLL6Q8N841 843 aa15.04■□□□□ -0
PTPN7-211ENST00000479092 ARHGAP45Q92619 1136 aa15.04■□□□□ -0
PTPN7-211ENST00000479092 DLEC1Q9Y238 1755 aa15.03■□□□□ -0
PTPN7-211ENST00000479092 CDHR2Q9BYE9 1310 aa15.03■□□□□ -0
PTPN7-211ENST00000479092 KLRG2A4D1S0 409 aaPredicted RBP15.03■□□□□ -0
PTPN7-211ENST00000479092 KCNA3P22001 575 aa15.03■□□□□ -0
PTPN7-211ENST00000479092 CRY2Q49AN0 593 aa15.03■□□□□ -0
PTPN7-211ENST00000479092 ATF7IPQ6VMQ6 1270 aa15.03■□□□□ -0
PTPN7-211ENST00000479092 UBE3BQ7Z3V4 1068 aa15.03■□□□□ -0
PTPN7-211ENST00000479092 SYNE4Q8N205 404 aa15.03■□□□□ -0
PTPN7-211ENST00000479092 CNKSR1Q969H4 720 aa15.03■□□□□ -0
PTPN7-211ENST00000479092 RCAN3Q9UKA8 241 aa15.03■□□□□ -0
PTPN7-211ENST00000479092 LAMB2P55268 1798 aa15.03■□□□□ -0
PTPN7-211ENST00000479092 UTRNP46939 3433 aa15.02■□□□□ -0
PTPN7-211ENST00000479092 GRIN3BO60391 1043 aa15.02■□□□□ -0
PTPN7-211ENST00000479092 CCT4P50991 539 aaKnown RBP15.02■□□□□ -0
PTPN7-211ENST00000479092 ZKSCAN2Q63HK3 967 aa15.02■□□□□ -0
PTPN7-211ENST00000479092 RBM17Q96I25 401 aaKnown RBP15.02■□□□□ -0
PTPN7-211ENST00000479092 C9orf78Q9NZ63 289 aaPredicted RBP15.02■□□□□ -0
PTPN7-211ENST00000479092 GRM8O00222 908 aa15.01□□□□□ -0.01
PTPN7-211ENST00000479092 TRIM27P14373 513 aa15.01□□□□□ -0.01
PTPN7-211ENST00000479092 YBX3P16989 372 aaKnown RBP eCLIP15.01□□□□□ -0.013e-8■□□□□ 10.5
PTPN7-211ENST00000479092 ALDH1B1P30837 517 aa15.01□□□□□ -0.01
PTPN7-211ENST00000479092 PRPF40BQ6NWY9 871 aaKnown RBP15.01□□□□□ -0.01
PTPN7-211ENST00000479092 C3orf67Q6ZVT6 689 aa15.01□□□□□ -0.01
PTPN7-211ENST00000479092 FTSJ3Q8IY81 847 aaKnown RBP15.01□□□□□ -0.01
PTPN7-211ENST00000479092 JARID2Q92833 1246 aaPredicted RBP15.01□□□□□ -0.01
PTPN7-211ENST00000479092 DDX60Q8IY21 1712 aaKnown RBP15□□□□□ -0.01
PTPN7-211ENST00000479092 ABCC4O15439 1325 aa15□□□□□ -0.01
PTPN7-211ENST00000479092 H7C1W4 665 aa15□□□□□ -0.01
PTPN7-211ENST00000479092 PDE8AO60658 829 aa15□□□□□ -0.01
PTPN7-211ENST00000479092 DDX46Q7L014 1031 aaKnown RBP15□□□□□ -0.01
PTPN7-211ENST00000479092 BRCA1P38398 1863 aaKnown RBP14.99□□□□□ -0.01
PTPN7-211ENST00000479092 CTSWP56202 376 aa14.99□□□□□ -0.01
PTPN7-211ENST00000479092 CCDC152Q4G0S7 254 aa14.99□□□□□ -0.01
PTPN7-211ENST00000479092 CLUAP1Q96AJ1 413 aa14.99□□□□□ -0.01
PTPN7-211ENST00000479092 HOXA10P31260 410 aaPredicted RBP14.98□□□□□ -0.01
PTPN7-211ENST00000479092 SF3B3Q15393 1217 aaKnown RBP14.98□□□□□ -0.01
PTPN7-211ENST00000479092 SOGA3Q5TF21 947 aa14.98□□□□□ -0.01
PTPN7-211ENST00000479092 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.98□□□□□ -0.01
PTPN7-211ENST00000479092 CRAMP1Q96RY5 1269 aa14.98□□□□□ -0.01
PTPN7-211ENST00000479092 PPEF1O14829 653 aaPredicted RBP14.97□□□□□ -0.01
PTPN7-211ENST00000479092 MS4A1P11836 297 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms