RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 CCDC30Q5VVM6 783 aa15.82■□□□□ 0.12
PTPN7-210ENST00000477625 WDR63Q8IWG1 891 aa15.82■□□□□ 0.12
PTPN7-210ENST00000477625 TSPYL6Q8N831 410 aa15.82■□□□□ 0.12
PTPN7-210ENST00000477625 SALL2Q9Y467 1007 aaPredicted RBP15.82■□□□□ 0.12
PTPN7-210ENST00000477625 RIC1Q4ADV7 1423 aa15.82■□□□□ 0.12
PTPN7-210ENST00000477625 SLX4Q8IY92 1834 aa15.82■□□□□ 0.12
PTPN7-210ENST00000477625 SBF1O95248 1867 aa15.82■□□□□ 0.12
PTPN7-210ENST00000477625 HOXA10P31260 410 aaPredicted RBP15.81■□□□□ 0.12
PTPN7-210ENST00000477625 RNF123Q5XPI4 1314 aa15.81■□□□□ 0.12
PTPN7-210ENST00000477625 NLRP3Q96P20 1036 aa15.81■□□□□ 0.12
PTPN7-210ENST00000477625 TAOK3Q9H2K8 898 aa15.81■□□□□ 0.12
PTPN7-210ENST00000477625 LTBP3Q9NS15 1303 aa15.81■□□□□ 0.12
PTPN7-210ENST00000477625 ZC3H4Q9UPT8 1303 aaKnown RBP15.81■□□□□ 0.12
PTPN7-210ENST00000477625 KIF3CO14782 793 aa15.8■□□□□ 0.12
PTPN7-210ENST00000477625 CCDC93Q567U6 631 aa15.8■□□□□ 0.12
PTPN7-210ENST00000477625 RPGRQ92834 1020 aaKnown RBP15.8■□□□□ 0.12
PTPN7-210ENST00000477625 PHAXQ9H814 394 aaKnown RBP15.8■□□□□ 0.12
PTPN7-210ENST00000477625 TRMT112Q9UI30 125 aaKnown RBP15.8■□□□□ 0.12
PTPN7-210ENST00000477625 KDM2BQ8NHM5 1336 aa15.79■□□□□ 0.12
PTPN7-210ENST00000477625 GOLGA2Q08379 1002 aa15.79■□□□□ 0.12
PTPN7-210ENST00000477625 C3orf67Q6ZVT6 689 aa15.79■□□□□ 0.12
PTPN7-210ENST00000477625 RIC3Q7Z5B4 369 aa15.79■□□□□ 0.12
PTPN7-210ENST00000477625 RBM17Q96I25 401 aaKnown RBP15.79■□□□□ 0.12
PTPN7-210ENST00000477625 CRAMP1Q96RY5 1269 aa15.79■□□□□ 0.12
PTPN7-210ENST00000477625 ISCA1Q9BUE6 129 aa15.79■□□□□ 0.12
PTPN7-210ENST00000477625 SH3TC1Q8TE82 1336 aa15.78■□□□□ 0.12
PTPN7-210ENST00000477625 TRIM28Q13263 835 aaKnown RBP15.78■□□□□ 0.12
PTPN7-210ENST00000477625 TWISTNBQ3B726 338 aaPredicted RBP15.78■□□□□ 0.12
PTPN7-210ENST00000477625 RTKN2Q8IZC4 609 aa15.78■□□□□ 0.12
PTPN7-210ENST00000477625 NMRK2Q9NPI5 230 aa15.78■□□□□ 0.12
PTPN7-210ENST00000477625 TNRC6CQ9HCJ0 1690 aaKnown RBP15.78■□□□□ 0.12
PTPN7-210ENST00000477625 ARFGEF2Q9Y6D5 1785 aa15.77■□□□□ 0.12
PTPN7-210ENST00000477625 ATP5J2-PTCD1G3V325 749 aa15.77■□□□□ 0.12
PTPN7-210ENST00000477625 HCLS1P14317 486 aaPredicted RBP15.77■□□□□ 0.12
PTPN7-210ENST00000477625 OLFM4Q6UX06 510 aa15.77■□□□□ 0.12
PTPN7-210ENST00000477625 SYNE4Q8N205 404 aa15.77■□□□□ 0.12
PTPN7-210ENST00000477625 FER1L6Q2WGJ9 1857 aa15.77■□□□□ 0.11
PTPN7-210ENST00000477625 FANCIQ9NVI1 1328 aa15.76■□□□□ 0.11
PTPN7-210ENST00000477625 GLTPD2A6NH11 291 aa15.76■□□□□ 0.11
PTPN7-210ENST00000477625 FKBP4Q02790 459 aaKnown RBP eCLIP15.76■□□□□ 0.11
PTPN7-210ENST00000477625 CC2D2BQ6DHV5 1058 aa15.76■□□□□ 0.11
PTPN7-210ENST00000477625 STK31Q9BXU1 1019 aa15.76■□□□□ 0.11
PTPN7-210ENST00000477625 CACNA1SQ13698 1873 aa15.76■□□□□ 0.11
PTPN7-210ENST00000477625 ANKRD36CQ5JPF3 1778 aa15.75■□□□□ 0.11
PTPN7-210ENST00000477625 DDX58O95786 925 aaKnown RBP15.75■□□□□ 0.11
PTPN7-210ENST00000477625 DPY19L2Q6NUT2 758 aa15.75■□□□□ 0.11
PTPN7-210ENST00000477625 ZNF428Q96B54 188 aa15.75■□□□□ 0.11
PTPN7-210ENST00000477625 FAM89AQ96GI7 184 aa15.75■□□□□ 0.11
PTPN7-210ENST00000477625 RRAGCQ9HB90 399 aa15.75■□□□□ 0.11
PTPN7-210ENST00000477625 TCERG1O14776 1098 aaKnown RBP15.74■□□□□ 0.11
PTPN7-210ENST00000477625 TOMM70O94826 608 aa15.74■□□□□ 0.11
PTPN7-210ENST00000477625 SLC4A2P04920 1241 aa15.74■□□□□ 0.11
PTPN7-210ENST00000477625 GRIPAP1Q4V328 841 aa15.74■□□□□ 0.11
PTPN7-210ENST00000477625 CCDC88AQ3V6T2 1871 aa15.74■□□□□ 0.11
PTPN7-210ENST00000477625 PPEF1O14829 653 aaPredicted RBP15.73■□□□□ 0.11
PTPN7-210ENST00000477625 BBOX1O75936 387 aa15.73■□□□□ 0.11
PTPN7-210ENST00000477625 KSR2Q6VAB6 950 aa15.73■□□□□ 0.11
PTPN7-210ENST00000477625 PSMD1Q99460 953 aa15.73■□□□□ 0.11
PTPN7-210ENST00000477625 MYD88Q99836 296 aa15.73■□□□□ 0.11
PTPN7-210ENST00000477625 METTL22Q9BUU2 404 aaPredicted RBP15.73■□□□□ 0.11
PTPN7-210ENST00000477625 MYH16Q9H6N6 1097 aa15.73■□□□□ 0.11
PTPN7-210ENST00000477625 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
PTPN7-210ENST00000477625 ZNF277Q9NRM2 450 aaPredicted RBP15.73■□□□□ 0.11
PTPN7-210ENST00000477625 PI4KAP2A4QPH2 592 aa15.72■□□□□ 0.11
PTPN7-210ENST00000477625 VAMP4O75379 141 aa15.72■□□□□ 0.11
PTPN7-210ENST00000477625 EXOSC9Q06265 439 aaKnown RBP15.72■□□□□ 0.11
PTPN7-210ENST00000477625 RTL5Q5HYW3 569 aaPredicted RBP15.72■□□□□ 0.11
PTPN7-210ENST00000477625 DDX46Q7L014 1031 aaKnown RBP15.72■□□□□ 0.11
PTPN7-210ENST00000477625 C16orf71Q8IYS4 520 aaPredicted RBP15.72■□□□□ 0.11
PTPN7-210ENST00000477625 PI4KAP1Q8N8J0 262 aa15.72■□□□□ 0.11
PTPN7-210ENST00000477625 CCDC191Q8NCU4 936 aa15.72■□□□□ 0.11
PTPN7-210ENST00000477625 TMX4Q9H1E5 349 aaPredicted RBP15.72■□□□□ 0.11
PTPN7-210ENST00000477625 MAP3K2Q9Y2U5 619 aa15.72■□□□□ 0.11
PTPN7-210ENST00000477625 ATP6V0A2Q9Y487 856 aa15.72■□□□□ 0.11
PTPN7-210ENST00000477625 ABCC4O15439 1325 aa15.71■□□□□ 0.11
PTPN7-210ENST00000477625 SNED1Q8TER0 1413 aa15.71■□□□□ 0.11
PTPN7-210ENST00000477625 VEGFAP15692 232 aaPredicted RBP15.71■□□□□ 0.11
PTPN7-210ENST00000477625 G2E3Q7L622 706 aa15.71■□□□□ 0.11
PTPN7-210ENST00000477625 ZBTB38Q8NAP3 1195 aaPredicted RBP15.71■□□□□ 0.11
PTPN7-210ENST00000477625 CCER2I3L3R5 266 aa15.7■□□□□ 0.1
PTPN7-210ENST00000477625 IRS4O14654 1257 aaPredicted RBP15.7■□□□□ 0.1
PTPN7-210ENST00000477625 IARSP41252 1262 aaKnown RBP15.7■□□□□ 0.1
PTPN7-210ENST00000477625 SF3B3Q15393 1217 aaKnown RBP15.7■□□□□ 0.1
PTPN7-210ENST00000477625 CWC25Q9NXE8 425 aaPredicted RBP15.7■□□□□ 0.1
PTPN7-210ENST00000477625 DICER1Q9UPY3 1922 aaKnown RBP15.7■□□□□ 0.1
PTPN7-210ENST00000477625 ZNF521Q96K83 1311 aa15.69■□□□□ 0.1
PTPN7-210ENST00000477625 TIAM2Q8IVF5 1701 aa15.69■□□□□ 0.1
PTPN7-210ENST00000477625 HSP90B1P14625 803 aaKnown RBP15.69■□□□□ 0.1
PTPN7-210ENST00000477625 GRAPQ13588 217 aa15.69■□□□□ 0.1
PTPN7-210ENST00000477625 SP8Q8IXZ3 490 aa15.69■□□□□ 0.1
PTPN7-210ENST00000477625 RBM46Q8TBY0 533 aaKnown RBP15.69■□□□□ 0.1
PTPN7-210ENST00000477625 GRAPLQ8TC17 118 aaPredicted RBP15.69■□□□□ 0.1
PTPN7-210ENST00000477625 POTECB2RU33 542 aa15.68■□□□□ 0.1
PTPN7-210ENST00000477625 DDNO94850 711 aaPredicted RBP15.68■□□□□ 0.1
PTPN7-210ENST00000477625 PCCAP05165 728 aaPredicted RBP15.68■□□□□ 0.1
PTPN7-210ENST00000477625 HSPA6P17066 643 aa15.68■□□□□ 0.1
PTPN7-210ENST00000477625 NEXNQ0ZGT2 675 aa15.68■□□□□ 0.1
PTPN7-210ENST00000477625 FLIIQ13045 1269 aa15.68■□□□□ 0.1
PTPN7-210ENST00000477625 SLC51AQ86UW1 340 aa15.68■□□□□ 0.1
PTPN7-210ENST00000477625 IGKV5-2P06315 115 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms