RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 BABAM1Q9NWV8 329 aa17.23■□□□□ 0.35
PABPC4-212ENST00000477556 HACL1Q9UJ83 578 aa17.23■□□□□ 0.35
PABPC4-212ENST00000477556 SCN4AP35499 1836 aa17.23■□□□□ 0.35
PABPC4-212ENST00000477556 FZD9O00144 591 aa17.22■□□□□ 0.35
PABPC4-212ENST00000477556 HSPA1AP0DMV8 641 aaKnown RBP17.22■□□□□ 0.35
PABPC4-212ENST00000477556 HSPA1BP0DMV9 641 aaKnown RBP17.22■□□□□ 0.35
PABPC4-212ENST00000477556 TMPOP42166 694 aaKnown RBP17.22■□□□□ 0.35
PABPC4-212ENST00000477556 EAPPQ56P03 285 aaPredicted RBP17.22■□□□□ 0.35
PABPC4-212ENST00000477556 COL13A1Q5TAT6 717 aaPredicted RBP17.22■□□□□ 0.35
PABPC4-212ENST00000477556 RBM17Q96I25 401 aaKnown RBP17.22■□□□□ 0.35
PABPC4-212ENST00000477556 NTSR2O95665 410 aa17.21■□□□□ 0.35
PABPC4-212ENST00000477556 EPHX2P34913 555 aa17.21■□□□□ 0.35
PABPC4-212ENST00000477556 CRAMP1Q96RY5 1269 aa17.21■□□□□ 0.35
PABPC4-212ENST00000477556 CLEC11AQ9Y240 323 aa17.21■□□□□ 0.35
PABPC4-212ENST00000477556 EIF6P56537 245 aaKnown RBP17.2■□□□□ 0.34
PABPC4-212ENST00000477556 GPC2Q8N158 579 aa17.2■□□□□ 0.34
PABPC4-212ENST00000477556 NLRP3Q96P20 1036 aa17.2■□□□□ 0.34
PABPC4-212ENST00000477556 TMX4Q9H1E5 349 aaPredicted RBP17.2■□□□□ 0.34
PABPC4-212ENST00000477556 MKRN1Q9UHC7 482 aaKnown RBP17.2■□□□□ 0.34
PABPC4-212ENST00000477556 SNED1Q8TER0 1413 aa17.2■□□□□ 0.34
PABPC4-212ENST00000477556 PPEF1O14829 653 aaPredicted RBP17.19■□□□□ 0.34
PABPC4-212ENST00000477556 PDIA6Q15084 440 aa17.19■□□□□ 0.34
PABPC4-212ENST00000477556 HSP90AB3PQ58FF7 597 aa17.19■□□□□ 0.34
PABPC4-212ENST00000477556 LRP10Q7Z4F1 713 aa17.19■□□□□ 0.34
PABPC4-212ENST00000477556 PNMA8AQ86V59 439 aaPredicted RBP17.19■□□□□ 0.34
PABPC4-212ENST00000477556 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
PABPC4-212ENST00000477556 RNF123Q5XPI4 1314 aa17.19■□□□□ 0.34
PABPC4-212ENST00000477556 PASKQ96RG2 1323 aa17.19■□□□□ 0.34
PABPC4-212ENST00000477556 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
PABPC4-212ENST00000477556 ANXA1P04083 346 aa17.18■□□□□ 0.34
PABPC4-212ENST00000477556 LARGE2Q8N3Y3 721 aa17.18■□□□□ 0.34
PABPC4-212ENST00000477556 MYBBP1AQ9BQG0 1328 aaKnown RBP17.18■□□□□ 0.34
PABPC4-212ENST00000477556 DDX10Q13206 875 aaKnown RBP17.17■□□□□ 0.34
PABPC4-212ENST00000477556 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
PABPC4-212ENST00000477556 PROSER3Q2NL68 480 aa17.17■□□□□ 0.34
PABPC4-212ENST00000477556 TNS4Q8IZW8 715 aa17.17■□□□□ 0.34
PABPC4-212ENST00000477556 GJA3Q9Y6H8 435 aa17.17■□□□□ 0.34
PABPC4-212ENST00000477556 TMEM88BA6NKF7 163 aa17.16■□□□□ 0.34
PABPC4-212ENST00000477556 ITGBL1O95965 494 aaPredicted RBP17.16■□□□□ 0.34
PABPC4-212ENST00000477556 LMOD1P29536 600 aaPredicted RBP17.16■□□□□ 0.34
PABPC4-212ENST00000477556 AIMP1Q12904 312 aaKnown RBP17.16■□□□□ 0.34
PABPC4-212ENST00000477556 WDR43Q15061 677 aaKnown RBP eCLIP17.16■□□□□ 0.34
PABPC4-212ENST00000477556 SLC10A5Q5PT55 438 aa17.16■□□□□ 0.34
PABPC4-212ENST00000477556 C3orf67Q6ZVT6 689 aa17.16■□□□□ 0.34
PABPC4-212ENST00000477556 COPS6Q7L5N1 327 aa17.16■□□□□ 0.34
PABPC4-212ENST00000477556 CCDC146Q8IYE0 955 aa17.16■□□□□ 0.34
PABPC4-212ENST00000477556 NECTIN2Q92692 538 aa17.16■□□□□ 0.34
PABPC4-212ENST00000477556 CNTNAP1P78357 1384 aa17.15■□□□□ 0.34
PABPC4-212ENST00000477556 NIM1KQ8IY84 436 aa17.15■□□□□ 0.34
PABPC4-212ENST00000477556 XAGE3Q8WTP9 111 aa17.15■□□□□ 0.34
PABPC4-212ENST00000477556 RUNDC1Q96C34 613 aa17.15■□□□□ 0.34
PABPC4-212ENST00000477556 PPIP5K2O43314 1243 aa17.14■□□□□ 0.33
PABPC4-212ENST00000477556 CNTROBQ8N137 903 aa17.14■□□□□ 0.33
PABPC4-212ENST00000477556 DDX21Q9NR30 783 aaKnown RBP eCLIP17.14■□□□□ 0.33
PABPC4-212ENST00000477556 ATP6V0A2Q9Y487 856 aa17.14■□□□□ 0.33
PABPC4-212ENST00000477556 LAS1LQ9Y4W2 734 aaKnown RBP17.14■□□□□ 0.33
PABPC4-212ENST00000477556 CHL1O00533 1208 aa17.13■□□□□ 0.33
PABPC4-212ENST00000477556 MAP1SQ66K74 1059 aaPredicted RBP17.13■□□□□ 0.33
PABPC4-212ENST00000477556 NLRP10Q86W26 655 aa17.13■□□□□ 0.33
PABPC4-212ENST00000477556 SUPT20HQ8NEM7 779 aa17.13■□□□□ 0.33
PABPC4-212ENST00000477556 VPS33BQ9H267 617 aa17.13■□□□□ 0.33
PABPC4-212ENST00000477556 ABCC4O15439 1325 aa17.13■□□□□ 0.33
PABPC4-212ENST00000477556 CAPN15O75808 1086 aa17.12■□□□□ 0.33
PABPC4-212ENST00000477556 BBOX1O75936 387 aa17.12■□□□□ 0.33
PABPC4-212ENST00000477556 TCIRG1Q13488 830 aa17.12■□□□□ 0.33
PABPC4-212ENST00000477556 TRMT112Q9UI30 125 aaKnown RBP17.12■□□□□ 0.33
PABPC4-212ENST00000477556 COL4A5P29400 1685 aa17.12■□□□□ 0.33
PABPC4-212ENST00000477556 ADAMTSL1Q8N6G6 1762 aa17.12■□□□□ 0.33
PABPC4-212ENST00000477556 HCLS1P14317 486 aaPredicted RBP17.11■□□□□ 0.33
PABPC4-212ENST00000477556 KRT24Q2M2I5 525 aa17.11■□□□□ 0.33
PABPC4-212ENST00000477556 DDX46Q7L014 1031 aaKnown RBP17.11■□□□□ 0.33
PABPC4-212ENST00000477556 SLC51AQ86UW1 340 aa17.11■□□□□ 0.33
PABPC4-212ENST00000477556 CHPF2Q9P2E5 772 aa17.11■□□□□ 0.33
PABPC4-212ENST00000477556 TRIM35Q9UPQ4 493 aa17.11■□□□□ 0.33
PABPC4-212ENST00000477556 SH3TC1Q8TE82 1336 aa17.11■□□□□ 0.33
PABPC4-212ENST00000477556 HOXB7P09629 217 aa17.1■□□□□ 0.33
PABPC4-212ENST00000477556 SCNN1DP51172 638 aa17.1■□□□□ 0.33
PABPC4-212ENST00000477556 AOC3Q16853 763 aa17.1■□□□□ 0.33
PABPC4-212ENST00000477556 HDGFL1Q5TGJ6 251 aa17.1■□□□□ 0.33
PABPC4-212ENST00000477556 DPP8Q6V1X1 898 aaPredicted RBP17.1■□□□□ 0.33
PABPC4-212ENST00000477556 SP8Q8IXZ3 490 aa17.1■□□□□ 0.33
PABPC4-212ENST00000477556 ANKRD36CQ5JPF3 1778 aa17.1■□□□□ 0.33
PABPC4-212ENST00000477556 EPS15P42566 896 aa17.09■□□□□ 0.33
PABPC4-212ENST00000477556 VEGFBP49765 207 aa17.09■□□□□ 0.33
PABPC4-212ENST00000477556 USP50Q70EL3 339 aaPredicted RBP17.09■□□□□ 0.33
PABPC4-212ENST00000477556 MPNDQ8N594 471 aa17.09■□□□□ 0.33
PABPC4-212ENST00000477556 AIDAQ96BJ3 306 aa17.09■□□□□ 0.33
PABPC4-212ENST00000477556 RTFDC1Q9BY42 306 aaPredicted RBP17.09■□□□□ 0.33
PABPC4-212ENST00000477556 ADAMTS8Q9UP79 889 aa17.09■□□□□ 0.33
PABPC4-212ENST00000477556 GRAPQ13588 217 aa17.08■□□□□ 0.32
PABPC4-212ENST00000477556 DEFB115Q30KQ5 88 aa17.08■□□□□ 0.32
PABPC4-212ENST00000477556 PLBD2Q8NHP8 589 aa17.08■□□□□ 0.32
PABPC4-212ENST00000477556 GRAPLQ8TC17 118 aaPredicted RBP17.08■□□□□ 0.32
PABPC4-212ENST00000477556 DBF4Q9UBU7 674 aaPredicted RBP17.08■□□□□ 0.32
PABPC4-212ENST00000477556 ZNRF3Q9ULT6 936 aa17.08■□□□□ 0.32
PABPC4-212ENST00000477556 RASSF10A6NK89 507 aa17.07■□□□□ 0.32
PABPC4-212ENST00000477556 ANKRD13DQ6ZTN6 518 aa17.07■□□□□ 0.32
PABPC4-212ENST00000477556 TMC4Q7Z404 712 aa17.07■□□□□ 0.32
PABPC4-212ENST00000477556 CFAP44Q96MT7 982 aa17.07■□□□□ 0.32
PABPC4-212ENST00000477556 ADARB2Q9NS39 739 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms