RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 CDK12Q9NYV4 1490 aaPredicted RBP9.33□□□□□ -0.92
LRCH3-215ENST00000476664 MROH2AA6NES4 1674 aa9.32□□□□□ -0.92
LRCH3-215ENST00000476664 CNTLNQ9NXG0 1405 aa9.32□□□□□ -0.92
LRCH3-215ENST00000476664 K7ELQ4 463 aaPredicted RBP9.32□□□□□ -0.92
LRCH3-215ENST00000476664 ENPP3O14638 875 aa9.32□□□□□ -0.92
LRCH3-215ENST00000476664 ZBTB24O43167 697 aaPredicted RBP9.32□□□□□ -0.92
LRCH3-215ENST00000476664 RXRBP28702 533 aa9.32□□□□□ -0.92
LRCH3-215ENST00000476664 ZNF772Q68DY9 489 aaPredicted RBP9.32□□□□□ -0.92
LRCH3-215ENST00000476664 FILIP1Q7Z7B0 1213 aa9.32□□□□□ -0.92
LRCH3-215ENST00000476664 SEPT12Q8IYM1 358 aa9.32□□□□□ -0.92
LRCH3-215ENST00000476664 SETDB2Q96T68 719 aa9.32□□□□□ -0.92
LRCH3-215ENST00000476664 SLC4A5Q9BY07 1137 aa9.32□□□□□ -0.92
LRCH3-215ENST00000476664 LRP5O75197 1615 aa9.31□□□□□ -0.92
LRCH3-215ENST00000476664 RAPGEF6Q8TEU7 1601 aa9.31□□□□□ -0.92
LRCH3-215ENST00000476664 BACH1O14867 736 aa9.31□□□□□ -0.92
LRCH3-215ENST00000476664 PARNO95453 639 aaKnown RBP9.31□□□□□ -0.92
LRCH3-215ENST00000476664 USP5P45974 858 aa9.31□□□□□ -0.92
LRCH3-215ENST00000476664 GJA8P48165 433 aa9.31□□□□□ -0.92
LRCH3-215ENST00000476664 MKL1Q969V6 931 aa9.31□□□□□ -0.92
LRCH3-215ENST00000476664 CARD14Q9BXL6 1004 aa9.31□□□□□ -0.92
LRCH3-215ENST00000476664 PCDH12Q9NPG4 1184 aa9.31□□□□□ -0.92
LRCH3-215ENST00000476664 SPG7Q9UQ90 795 aa9.31□□□□□ -0.92
LRCH3-215ENST00000476664 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.31□□□□□ -0.92
LRCH3-215ENST00000476664 REREQ9P2R6 1566 aa9.3□□□□□ -0.92
LRCH3-215ENST00000476664 ATAD2Q6PL18 1390 aa9.3□□□□□ -0.92
LRCH3-215ENST00000476664 EP400Q96L91 3159 aa9.3□□□□□ -0.92
LRCH3-215ENST00000476664 HAX1O00165 279 aa9.3□□□□□ -0.92
LRCH3-215ENST00000476664 DNAJC6O75061 913 aa9.3□□□□□ -0.92
LRCH3-215ENST00000476664 NR1I2O75469 434 aa9.3□□□□□ -0.92
LRCH3-215ENST00000476664 ATF4P18848 351 aaPredicted RBP9.3□□□□□ -0.92
LRCH3-215ENST00000476664 YY1P25490 414 aa9.3□□□□□ -0.92
LRCH3-215ENST00000476664 EXOC8Q8IYI6 725 aa9.3□□□□□ -0.92
LRCH3-215ENST00000476664 THAP11Q96EK4 314 aa9.3□□□□□ -0.92
LRCH3-215ENST00000476664 SLC10A4Q96EP9 437 aa9.3□□□□□ -0.92
LRCH3-215ENST00000476664 SRA1Q9HD15 236 aaKnown RBP9.3□□□□□ -0.92
LRCH3-215ENST00000476664 IFT57Q9NWB7 429 aa9.3□□□□□ -0.92
LRCH3-215ENST00000476664 SLC52A1Q9NWF4 448 aa9.3□□□□□ -0.92
LRCH3-215ENST00000476664 DIP2CQ9Y2E4 1556 aa9.29□□□□□ -0.92
LRCH3-215ENST00000476664 GOLGA3Q08378 1498 aa9.29□□□□□ -0.92
LRCH3-215ENST00000476664 MAGEB6P1A0A0J9YX57 407 aa9.29□□□□□ -0.92
LRCH3-215ENST00000476664 PPP1R12AO14974 1030 aaPredicted RBP9.29□□□□□ -0.92
LRCH3-215ENST00000476664 DXOO77932 396 aaKnown RBP9.29□□□□□ -0.92
LRCH3-215ENST00000476664 CTSHP09668 335 aa9.29□□□□□ -0.92
LRCH3-215ENST00000476664 EIF4BP23588 611 aaKnown RBP9.29□□□□□ -0.92
LRCH3-215ENST00000476664 MSS51Q4VC12 460 aa9.29□□□□□ -0.92
LRCH3-215ENST00000476664 SCUBE3Q8IX30 993 aa9.29□□□□□ -0.92
LRCH3-215ENST00000476664 SAP130Q9H0E3 1048 aa9.29□□□□□ -0.92
LRCH3-215ENST00000476664 SPC25Q9HBM1 224 aa9.29□□□□□ -0.92
LRCH3-215ENST00000476664 GGT7Q9UJ14 662 aa9.29□□□□□ -0.92
LRCH3-215ENST00000476664 PRKAB1Q9Y478 270 aa9.29□□□□□ -0.92
LRCH3-215ENST00000476664 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.29□□□□□ -0.92
LRCH3-215ENST00000476664 FAM135BQ49AJ0 1406 aa9.29□□□□□ -0.92
LRCH3-215ENST00000476664 SYNMO15061 1565 aa9.29□□□□□ -0.92
LRCH3-215ENST00000476664 DNMT1P26358 1616 aaKnown RBP9.28□□□□□ -0.92
LRCH3-215ENST00000476664 ZMYM3Q14202 1370 aa9.28□□□□□ -0.92
LRCH3-215ENST00000476664 MORC4Q8TE76 937 aa9.28□□□□□ -0.92
LRCH3-215ENST00000476664 UBE2Q2Q8WVN8 375 aa9.28□□□□□ -0.92
LRCH3-215ENST00000476664 CHPF2Q9P2E5 772 aa9.28□□□□□ -0.92
LRCH3-215ENST00000476664 PCDH10Q9P2E7 1040 aa9.28□□□□□ -0.92
LRCH3-215ENST00000476664 CEP350Q5VT06 3117 aa9.27□□□□□ -0.92
LRCH3-215ENST00000476664 SENP3-EIF4A1A0A087X0R7 540 aa9.27□□□□□ -0.93
LRCH3-215ENST00000476664 SH3RF1Q7Z6J0 888 aa9.27□□□□□ -0.93
LRCH3-215ENST00000476664 GJD3Q8N144 294 aa9.27□□□□□ -0.93
LRCH3-215ENST00000476664 GPRASP2Q96D09 838 aa9.27□□□□□ -0.93
LRCH3-215ENST00000476664 SLKQ9H2G2 1235 aaPredicted RBP9.27□□□□□ -0.93
LRCH3-215ENST00000476664 CDV3Q9UKY7 258 aaKnown RBP9.27□□□□□ -0.93
LRCH3-215ENST00000476664 TNFRSF10BO14763 440 aa9.26□□□□□ -0.93
LRCH3-215ENST00000476664 NEFLP07196 543 aa9.26□□□□□ -0.93
LRCH3-215ENST00000476664 ERFEQ4G0M1 354 aa9.26□□□□□ -0.93
LRCH3-215ENST00000476664 BPHLQ86WA6 291 aaPredicted RBP9.26□□□□□ -0.93
LRCH3-215ENST00000476664 CSRNP1Q96S65 589 aa9.26□□□□□ -0.93
LRCH3-215ENST00000476664 NBPF3Q9H094 633 aa9.26□□□□□ -0.93
LRCH3-215ENST00000476664 UNC93B1Q9H1C4 597 aa9.26□□□□□ -0.93
LRCH3-215ENST00000476664 FAN1Q9Y2M0 1017 aa9.26□□□□□ -0.93
LRCH3-215ENST00000476664 LRP6O75581 1613 aa9.26□□□□□ -0.93
LRCH3-215ENST00000476664 ABCA6Q8N139 1617 aa9.26□□□□□ -0.93
LRCH3-215ENST00000476664 XIRP1Q702N8 1843 aaKnown RBP9.26□□□□□ -0.93
LRCH3-215ENST00000476664 ROBO1Q9Y6N7 1651 aa9.26□□□□□ -0.93
LRCH3-215ENST00000476664 PAK2Q13177 524 aa9.25□□□□□ -0.93
LRCH3-215ENST00000476664 SERINC3Q13530 473 aa9.25□□□□□ -0.93
LRCH3-215ENST00000476664 PLEKHG6Q3KR16 790 aa9.25□□□□□ -0.93
LRCH3-215ENST00000476664 COX20Q5RI15 118 aa9.25□□□□□ -0.93
LRCH3-215ENST00000476664 TICAM2Q86XR7 235 aa9.25□□□□□ -0.93
LRCH3-215ENST00000476664 IRF2BPLQ9H1B7 796 aa9.25□□□□□ -0.93
LRCH3-215ENST00000476664 SIRPGQ9P1W8 387 aa9.25□□□□□ -0.93
LRCH3-215ENST00000476664 CDK13Q14004 1512 aaKnown RBP9.25□□□□□ -0.93
LRCH3-215ENST00000476664 RGS12O14924 1447 aa9.24□□□□□ -0.93
LRCH3-215ENST00000476664 A2ML1A8K2U0 1454 aa9.24□□□□□ -0.93
LRCH3-215ENST00000476664 CCDC194A0A1B0GVG4 234 aa9.24□□□□□ -0.93
LRCH3-215ENST00000476664 TMEM229AB2RXF0 380 aa9.24□□□□□ -0.93
LRCH3-215ENST00000476664 WASLO00401 505 aaPredicted RBP9.24□□□□□ -0.93
LRCH3-215ENST00000476664 SSBP05455 408 aaKnown RBP eCLIP9.24□□□□□ -0.93
LRCH3-215ENST00000476664 MZF1P28698 734 aaPredicted RBP9.24□□□□□ -0.93
LRCH3-215ENST00000476664 MMP16P51512 607 aa9.24□□□□□ -0.93
LRCH3-215ENST00000476664 AGERQ15109 404 aa9.24□□□□□ -0.93
LRCH3-215ENST00000476664 MEX3CQ5U5Q3 659 aaKnown RBP9.24□□□□□ -0.93
LRCH3-215ENST00000476664 TNS4Q8IZW8 715 aa9.24□□□□□ -0.93
LRCH3-215ENST00000476664 STAG2Q8N3U4 1231 aa9.24□□□□□ -0.93
LRCH3-215ENST00000476664 CFHR5Q9BXR6 569 aa9.24□□□□□ -0.93
LRCH3-215ENST00000476664 POLIQ9UNA4 740 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms