RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 NEUROD1Q13562 356 aa10.16□□□□□ -0.78
TM9SF3-204ENST00000475401 TREML4Q6UXN2 200 aa10.16□□□□□ -0.78
TM9SF3-204ENST00000475401 COL25A1Q9BXS0 654 aaPredicted RBP10.16□□□□□ -0.78
TM9SF3-204ENST00000475401 BIN2Q9UBW5 565 aaPredicted RBP10.16□□□□□ -0.78
TM9SF3-204ENST00000475401 DMGDHQ9UI17 866 aaKnown RBP10.16□□□□□ -0.78
TM9SF3-204ENST00000475401 BMP4P12644 408 aa10.15□□□□□ -0.78
TM9SF3-204ENST00000475401 INPP5BP32019 993 aa10.15□□□□□ -0.78
TM9SF3-204ENST00000475401 GPR161Q8N6U8 529 aaKnown RBP10.15□□□□□ -0.78
TM9SF3-204ENST00000475401 MBIPQ9NS73 344 aa10.15□□□□□ -0.78
TM9SF3-204ENST00000475401 PRR12Q9ULL5 1215 aa10.15□□□□□ -0.78
TM9SF3-204ENST00000475401 SOWAHDA6NJG2 315 aa10.14□□□□□ -0.79
TM9SF3-204ENST00000475401 CD33P20138 364 aa10.14□□□□□ -0.79
TM9SF3-204ENST00000475401 EIF1AXP47813 144 aaKnown RBP10.14□□□□□ -0.79
TM9SF3-204ENST00000475401 RGL4Q8IZJ4 473 aa10.14□□□□□ -0.79
TM9SF3-204ENST00000475401 RPLP1P05386 114 aaKnown RBP10.13□□□□□ -0.79
TM9SF3-204ENST00000475401 NPR3P17342 541 aa10.13□□□□□ -0.79
TM9SF3-204ENST00000475401 KCNQ4P56696 695 aa10.13□□□□□ -0.79
TM9SF3-204ENST00000475401 FAM182BQ5T319 152 aa10.13□□□□□ -0.79
TM9SF3-204ENST00000475401 CMTR1Q8N1G2 835 aaKnown RBP10.13□□□□□ -0.79
TM9SF3-204ENST00000475401 FNDC3AQ9Y2H6 1198 aaKnown RBP10.13□□□□□ -0.79
TM9SF3-204ENST00000475401 RTCBQ9Y3I0 505 aaKnown RBP10.13□□□□□ -0.79
TM9SF3-204ENST00000475401 MAP2K3P46734 347 aa10.12□□□□□ -0.79
TM9SF3-204ENST00000475401 SFSWAPQ12872 951 aaKnown RBP10.12□□□□□ -0.79
TM9SF3-204ENST00000475401 GPR152Q8TDT2 470 aa10.12□□□□□ -0.79
TM9SF3-204ENST00000475401 PNMA5Q96PV4 448 aa10.12□□□□□ -0.79
TM9SF3-204ENST00000475401 C11orf16Q9NQ32 467 aa10.12□□□□□ -0.79
TM9SF3-204ENST00000475401 OPLAHO14841 1288 aa10.11□□□□□ -0.79
TM9SF3-204ENST00000475401 ZBTB39O15060 712 aa10.11□□□□□ -0.79
TM9SF3-204ENST00000475401 DNM1Q05193 864 aaKnown RBP10.11□□□□□ -0.79
TM9SF3-204ENST00000475401 GAS6Q14393 721 aa10.11□□□□□ -0.79
TM9SF3-204ENST00000475401 CNTNAP3BQ96NU0 1288 aa10.11□□□□□ -0.79
TM9SF3-204ENST00000475401 CNTNAP3Q9BZ76 1288 aa10.11□□□□□ -0.79
TM9SF3-204ENST00000475401 NDUFB5O43674 189 aa10.1□□□□□ -0.79
TM9SF3-204ENST00000475401 GMPRP36959 345 aa10.1□□□□□ -0.79
TM9SF3-204ENST00000475401 USP5P45974 858 aa10.1□□□□□ -0.79
TM9SF3-204ENST00000475401 CTBSQ01459 385 aa10.1□□□□□ -0.79
TM9SF3-204ENST00000475401 SPEM2Q0P670 501 aa10.1□□□□□ -0.79
TM9SF3-204ENST00000475401 ATCAYQ86WG3 371 aa10.1□□□□□ -0.79
TM9SF3-204ENST00000475401 EFCC1Q9HA90 598 aa10.1□□□□□ -0.79
TM9SF3-204ENST00000475401 STRN4Q9NRL3 753 aa10.1□□□□□ -0.79
TM9SF3-204ENST00000475401 BRPF3Q9ULD4 1205 aa10.1□□□□□ -0.79
TM9SF3-204ENST00000475401 MZF1P28698 734 aaPredicted RBP10.09□□□□□ -0.79
TM9SF3-204ENST00000475401 SRSF11Q05519 484 aaKnown RBP10.09□□□□□ -0.79
TM9SF3-204ENST00000475401 CCINQ13939 588 aa10.09□□□□□ -0.79
TM9SF3-204ENST00000475401 FAM26DQ5JW98 314 aa10.09□□□□□ -0.79
TM9SF3-204ENST00000475401 EDEM1Q92611 657 aa10.09□□□□□ -0.79
TM9SF3-204ENST00000475401 IGF1RP08069 1367 aa10.09□□□□□ -0.79
TM9SF3-204ENST00000475401 XYLBO75191 536 aa10.08□□□□□ -0.8
TM9SF3-204ENST00000475401 RNFT1Q5M7Z0 435 aa10.08□□□□□ -0.8
TM9SF3-204ENST00000475401 USP20Q9Y2K6 914 aa10.08□□□□□ -0.8
TM9SF3-204ENST00000475401 UBAP1LF5GYI3 381 aa10.07□□□□□ -0.8
TM9SF3-204ENST00000475401 NUDT16Q96DE0 195 aaKnown RBP10.07□□□□□ -0.8
TM9SF3-204ENST00000475401 C8orf34Q49A92 452 aa10.06□□□□□ -0.8
TM9SF3-204ENST00000475401 BHMTQ93088 406 aa10.06□□□□□ -0.8
TM9SF3-204ENST00000475401 GZF1Q9H116 711 aaPredicted RBP10.06□□□□□ -0.8
TM9SF3-204ENST00000475401 AVENQ9NQS1 362 aaPredicted RBP10.06□□□□□ -0.8
TM9SF3-204ENST00000475401 ADAMTS2O95450 1211 aa10.05□□□□□ -0.8
TM9SF3-204ENST00000475401 PDGFAP04085 211 aa10.05□□□□□ -0.8
TM9SF3-204ENST00000475401 ARHGAP4P98171 946 aa10.05□□□□□ -0.8
TM9SF3-204ENST00000475401 EHHADHQ08426 723 aa10.05□□□□□ -0.8
TM9SF3-204ENST00000475401 ZNF468Q5VIY5 522 aaPredicted RBP10.05□□□□□ -0.8
TM9SF3-204ENST00000475401 SND1Q7KZF4 910 aaKnown RBP eCLIP10.05□□□□□ -0.8
TM9SF3-204ENST00000475401 TMC1Q8TDI8 760 aa10.05□□□□□ -0.8
TM9SF3-204ENST00000475401 GSX2Q9BZM3 304 aa10.05□□□□□ -0.8
TM9SF3-204ENST00000475401 GDF2Q9UK05 429 aaPredicted RBP10.05□□□□□ -0.8
TM9SF3-204ENST00000475401 POLIQ9UNA4 740 aa10.05□□□□□ -0.8
TM9SF3-204ENST00000475401 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.05□□□□□ -0.8
TM9SF3-204ENST00000475401 EGFRP00533 1210 aa10.04□□□□□ -0.8
TM9SF3-204ENST00000475401 ARAFP10398 606 aa10.04□□□□□ -0.8
TM9SF3-204ENST00000475401 ADH6P28332 368 aa10.04□□□□□ -0.8
TM9SF3-204ENST00000475401 KRT76Q01546 638 aa10.04□□□□□ -0.8
TM9SF3-204ENST00000475401 PDE3BQ13370 1112 aa10.04□□□□□ -0.8
TM9SF3-204ENST00000475401 KRT25Q7Z3Z0 450 aa10.04□□□□□ -0.8
TM9SF3-204ENST00000475401 GOLGA6L1Q8N7Z2 621 aa10.04□□□□□ -0.8
TM9SF3-204ENST00000475401 CITED4Q96RK1 184 aa10.04□□□□□ -0.8
TM9SF3-204ENST00000475401 SLC30A3Q99726 388 aa10.04□□□□□ -0.8
TM9SF3-204ENST00000475401 C2CD2LO14523 706 aa10.03□□□□□ -0.8
TM9SF3-204ENST00000475401 FZD6O60353 706 aa10.03□□□□□ -0.8
TM9SF3-204ENST00000475401 SYT9Q86SS6 491 aa10.03□□□□□ -0.8
TM9SF3-204ENST00000475401 OXCT2Q9BYC2 517 aaPredicted RBP10.03□□□□□ -0.8
TM9SF3-204ENST00000475401 CCDC87Q9NVE4 849 aa10.03□□□□□ -0.8
TM9SF3-204ENST00000475401 KCNMB2Q9Y691 235 aa10.03□□□□□ -0.8
TM9SF3-204ENST00000475401 SASH3O75995 380 aa10.02□□□□□ -0.81
TM9SF3-204ENST00000475401 RARAP10276 462 aa10.02□□□□□ -0.81
TM9SF3-204ENST00000475401 NFKB1P19838 968 aa10.02□□□□□ -0.81
TM9SF3-204ENST00000475401 MAPK1P28482 360 aa10.02□□□□□ -0.81
TM9SF3-204ENST00000475401 PDE12Q6L8Q7 609 aaKnown RBP10.02□□□□□ -0.81
TM9SF3-204ENST00000475401 ZNF438Q7Z4V0 828 aa10.02□□□□□ -0.81
TM9SF3-204ENST00000475401 RAB44Q7Z6P3 723 aaPredicted RBP10.02□□□□□ -0.81
TM9SF3-204ENST00000475401 NLRP13Q86W25 1043 aa10.02□□□□□ -0.81
TM9SF3-204ENST00000475401 DCTN4Q9UJW0 460 aa10.02□□□□□ -0.81
TM9SF3-204ENST00000475401 GRNP28799 593 aaKnown RBP10.01□□□□□ -0.81
TM9SF3-204ENST00000475401 PCBP4P57723 403 aaKnown RBP10.01□□□□□ -0.81
TM9SF3-204ENST00000475401 GRIN2CQ14957 1233 aa10.01□□□□□ -0.81
TM9SF3-204ENST00000475401 ECM1Q16610 540 aa10.01□□□□□ -0.81
TM9SF3-204ENST00000475401 HCN2Q9UL51 889 aa10.01□□□□□ -0.81
TM9SF3-204ENST00000475401 NEURL1BA8MQ27 555 aa10□□□□□ -0.81
TM9SF3-204ENST00000475401 SIN3BO75182 1162 aa10□□□□□ -0.81
TM9SF3-204ENST00000475401 SLURP2P0DP57 97 aa10□□□□□ -0.81
TM9SF3-204ENST00000475401 TARSP26639 723 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms