RNA–Protein interactions for RNA: ENST00000475283.2

SUSD1-206, Transcript of sushi domain containing 1, humanhuman

TSL 3

Gene SUSD1, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-206ENST00000475283 CCDC146Q8IYE0 955 aa18.28■□□□□ 0.52
SUSD1-206ENST00000475283 L3MBTL3Q96JM7 780 aaPredicted RBP18.28■□□□□ 0.52
SUSD1-206ENST00000475283 CRAMP1Q96RY5 1269 aa18.28■□□□□ 0.52
SUSD1-206ENST00000475283 PSMD1Q99460 953 aa18.28■□□□□ 0.52
SUSD1-206ENST00000475283 RIC1Q4ADV7 1423 aa18.28■□□□□ 0.52
SUSD1-206ENST00000475283 ABCC12Q96J65 1359 aa18.28■□□□□ 0.52
SUSD1-206ENST00000475283 CHL1O00533 1208 aa18.27■□□□□ 0.52
SUSD1-206ENST00000475283 NTSR2O95665 410 aa18.27■□□□□ 0.52
SUSD1-206ENST00000475283 HSP90AB3PQ58FF7 597 aa18.27■□□□□ 0.52
SUSD1-206ENST00000475283 JDP2Q8WYK2 163 aa18.27■□□□□ 0.52
SUSD1-206ENST00000475283 NLRP3Q96P20 1036 aa18.27■□□□□ 0.52
SUSD1-206ENST00000475283 UTP14AQ9BVJ6 771 aaKnown RBP18.27■□□□□ 0.52
SUSD1-206ENST00000475283 TMX4Q9H1E5 349 aaPredicted RBP18.27■□□□□ 0.52
SUSD1-206ENST00000475283 SLC10A5Q5PT55 438 aa18.26■□□□□ 0.51
SUSD1-206ENST00000475283 FZD9O00144 591 aa18.25■□□□□ 0.51
SUSD1-206ENST00000475283 COPS6Q7L5N1 327 aa18.25■□□□□ 0.51
SUSD1-206ENST00000475283 DDX21Q9NR30 783 aaKnown RBP eCLIP18.25■□□□□ 0.51
SUSD1-206ENST00000475283 LAS1LQ9Y4W2 734 aaKnown RBP18.25■□□□□ 0.51
SUSD1-206ENST00000475283 RNF123Q5XPI4 1314 aa18.24■□□□□ 0.51
SUSD1-206ENST00000475283 ANXA1P04083 346 aa18.24■□□□□ 0.51
SUSD1-206ENST00000475283 AIMP1Q12904 312 aaKnown RBP18.24■□□□□ 0.51
SUSD1-206ENST00000475283 PROSER3Q2NL68 480 aa18.24■□□□□ 0.51
SUSD1-206ENST00000475283 LDHDQ86WU2 507 aa18.24■□□□□ 0.51
SUSD1-206ENST00000475283 TAF1DQ9H5J8 278 aaPredicted RBP18.24■□□□□ 0.51
SUSD1-206ENST00000475283 HACL1Q9UJ83 578 aa18.24■□□□□ 0.51
SUSD1-206ENST00000475283 ADAMTS8Q9UP79 889 aa18.24■□□□□ 0.51
SUSD1-206ENST00000475283 TRIM35Q9UPQ4 493 aa18.24■□□□□ 0.51
SUSD1-206ENST00000475283 XAGE3Q8WTP9 111 aa18.23■□□□□ 0.51
SUSD1-206ENST00000475283 NECTIN2Q92692 538 aa18.23■□□□□ 0.51
SUSD1-206ENST00000475283 ZNF541Q9H0D2 1346 aa18.23■□□□□ 0.51
SUSD1-206ENST00000475283 PPEF1O14829 653 aaPredicted RBP18.22■□□□□ 0.51
SUSD1-206ENST00000475283 HOXB7P09629 217 aa18.22■□□□□ 0.51
SUSD1-206ENST00000475283 POTEIP0CG38 1075 aa18.22■□□□□ 0.51
SUSD1-206ENST00000475283 POTEJP0CG39 1038 aa18.22■□□□□ 0.51
SUSD1-206ENST00000475283 EIF6P56537 245 aaKnown RBP18.22■□□□□ 0.51
SUSD1-206ENST00000475283 TCIRG1Q13488 830 aa18.22■□□□□ 0.51
SUSD1-206ENST00000475283 PNMA8AQ86V59 439 aaPredicted RBP18.22■□□□□ 0.51
SUSD1-206ENST00000475283 GPC2Q8N158 579 aa18.22■□□□□ 0.51
SUSD1-206ENST00000475283 CREBZFQ9NS37 354 aa18.22■□□□□ 0.51
SUSD1-206ENST00000475283 EPHX2P34913 555 aa18.21■□□□□ 0.51
SUSD1-206ENST00000475283 VPS33BQ9H267 617 aa18.21■□□□□ 0.51
SUSD1-206ENST00000475283 PRKRIP1Q9H875 184 aaPredicted RBP18.21■□□□□ 0.51
SUSD1-206ENST00000475283 TCERG1O14776 1098 aaKnown RBP18.2■□□□□ 0.5
SUSD1-206ENST00000475283 BBOX1O75936 387 aa18.2■□□□□ 0.5
SUSD1-206ENST00000475283 EAPPQ56P03 285 aaPredicted RBP18.2■□□□□ 0.5
SUSD1-206ENST00000475283 C3orf67Q6ZVT6 689 aa18.2■□□□□ 0.5
SUSD1-206ENST00000475283 NLRP10Q86W26 655 aa18.2■□□□□ 0.5
SUSD1-206ENST00000475283 POTEDQ86YR6 584 aa18.2■□□□□ 0.5
SUSD1-206ENST00000475283 LARGE2Q8N3Y3 721 aa18.2■□□□□ 0.5
SUSD1-206ENST00000475283 CFAP44Q96MT7 982 aa18.2■□□□□ 0.5
SUSD1-206ENST00000475283 SCN4AP35499 1836 aa18.2■□□□□ 0.5
SUSD1-206ENST00000475283 SNED1Q8TER0 1413 aa18.2■□□□□ 0.5
SUSD1-206ENST00000475283 KRT24Q2M2I5 525 aa18.19■□□□□ 0.5
SUSD1-206ENST00000475283 HDGFL1Q5TGJ6 251 aa18.19■□□□□ 0.5
SUSD1-206ENST00000475283 CHPF2Q9P2E5 772 aa18.19■□□□□ 0.5
SUSD1-206ENST00000475283 DBF4Q9UBU7 674 aaPredicted RBP18.19■□□□□ 0.5
SUSD1-206ENST00000475283 TRMT112Q9UI30 125 aaKnown RBP18.19■□□□□ 0.5
SUSD1-206ENST00000475283 CLEC11AQ9Y240 323 aa18.19■□□□□ 0.5
SUSD1-206ENST00000475283 ATP6V0A2Q9Y487 856 aa18.19■□□□□ 0.5
SUSD1-206ENST00000475283 SUPT20HQ8NEM7 779 aa18.18■□□□□ 0.5
SUSD1-206ENST00000475283 PLBD2Q8NHP8 589 aa18.18■□□□□ 0.5
SUSD1-206ENST00000475283 SH3TC1Q8TE82 1336 aa18.18■□□□□ 0.5
SUSD1-206ENST00000475283 LMOD1P29536 600 aaPredicted RBP18.17■□□□□ 0.5
SUSD1-206ENST00000475283 CALD1Q05682 793 aaKnown RBP18.17■□□□□ 0.5
SUSD1-206ENST00000475283 ANKRD13DQ6ZTN6 518 aa18.17■□□□□ 0.5
SUSD1-206ENST00000475283 DDX46Q7L014 1031 aaKnown RBP18.17■□□□□ 0.5
SUSD1-206ENST00000475283 SP8Q8IXZ3 490 aa18.17■□□□□ 0.5
SUSD1-206ENST00000475283 HYPKQ9NX55 129 aa18.17■□□□□ 0.5
SUSD1-206ENST00000475283 GJA3Q9Y6H8 435 aa18.17■□□□□ 0.5
SUSD1-206ENST00000475283 PASKQ96RG2 1323 aa18.17■□□□□ 0.5
SUSD1-206ENST00000475283 HCLS1P14317 486 aaPredicted RBP18.16■□□□□ 0.5
SUSD1-206ENST00000475283 NIM1KQ8IY84 436 aa18.16■□□□□ 0.5
SUSD1-206ENST00000475283 ABCC4O15439 1325 aa18.16■□□□□ 0.5
SUSD1-206ENST00000475283 PPIP5K2O43314 1243 aa18.15■□□□□ 0.5
SUSD1-206ENST00000475283 ITGBL1O95965 494 aaPredicted RBP18.15■□□□□ 0.5
SUSD1-206ENST00000475283 DUSP27Q5VZP5 1158 aa18.15■□□□□ 0.5
SUSD1-206ENST00000475283 TMEM88BA6NKF7 163 aa18.14■□□□□ 0.49
SUSD1-206ENST00000475283 GRAPQ13588 217 aa18.14■□□□□ 0.49
SUSD1-206ENST00000475283 TMC4Q7Z404 712 aa18.14■□□□□ 0.49
SUSD1-206ENST00000475283 CNTROBQ8N137 903 aa18.14■□□□□ 0.49
SUSD1-206ENST00000475283 GRAPLQ8TC17 118 aaPredicted RBP18.14■□□□□ 0.49
SUSD1-206ENST00000475283 RTFDC1Q9BY42 306 aaPredicted RBP18.14■□□□□ 0.49
SUSD1-206ENST00000475283 MBIPQ9NS73 344 aa18.14■□□□□ 0.49
SUSD1-206ENST00000475283 MKRN1Q9UHC7 482 aaKnown RBP18.14■□□□□ 0.49
SUSD1-206ENST00000475283 APAF1O14727 1248 aa18.13■□□□□ 0.49
SUSD1-206ENST00000475283 ZNF853P0CG23 659 aa18.13■□□□□ 0.49
SUSD1-206ENST00000475283 HSPA1AP0DMV8 641 aaKnown RBP18.13■□□□□ 0.49
SUSD1-206ENST00000475283 HSPA1BP0DMV9 641 aaKnown RBP18.13■□□□□ 0.49
SUSD1-206ENST00000475283 GNAI1P63096 354 aa18.13■□□□□ 0.49
SUSD1-206ENST00000475283 AOC3Q16853 763 aa18.13■□□□□ 0.49
SUSD1-206ENST00000475283 DPP8Q6V1X1 898 aaPredicted RBP18.13■□□□□ 0.49
SUSD1-206ENST00000475283 MPNDQ8N594 471 aa18.13■□□□□ 0.49
SUSD1-206ENST00000475283 CHMP4AQ9BY43 222 aa18.13■□□□□ 0.49
SUSD1-206ENST00000475283 IFT57Q9NWB7 429 aa18.13■□□□□ 0.49
SUSD1-206ENST00000475283 COL13A1Q5TAT6 717 aaPredicted RBP18.12■□□□□ 0.49
SUSD1-206ENST00000475283 ISCA1Q9BUE6 129 aa18.12■□□□□ 0.49
SUSD1-206ENST00000475283 ZNRF3Q9ULT6 936 aa18.12■□□□□ 0.49
SUSD1-206ENST00000475283 TRIM28Q13263 835 aaKnown RBP18.11■□□□□ 0.49
SUSD1-206ENST00000475283 MAP1SQ66K74 1059 aaPredicted RBP18.11■□□□□ 0.49
SUSD1-206ENST00000475283 USP50Q70EL3 339 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms