RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SGSM2O43147 1006 aa26.43■■□□□ 1.82
CCM2-206ENST00000474617 DNAJC10Q8IXB1 793 aa26.43■■□□□ 1.82
CCM2-206ENST00000474617 ANO2Q9NQ90 1003 aa26.43■■□□□ 1.82
CCM2-206ENST00000474617 RFX7Q2KHR2 1363 aa26.42■■□□□ 1.82
CCM2-206ENST00000474617 RAD50Q92878 1312 aa26.42■■□□□ 1.82
CCM2-206ENST00000474617 UNC5CLQ8IV45 518 aa26.42■■□□□ 1.82
CCM2-206ENST00000474617 MAP3K15Q6ZN16 1313 aa26.41■■□□□ 1.82
CCM2-206ENST00000474617 FOXO4P98177 505 aa26.41■■□□□ 1.82
CCM2-206ENST00000474617 KIAA1211Q6ZU35 1233 aa26.41■■□□□ 1.82
CCM2-206ENST00000474617 PLA2G12BQ9BX93 195 aa26.41■■□□□ 1.82
CCM2-206ENST00000474617 DIAPH3Q9NSV4 1193 aa26.41■■□□□ 1.82
CCM2-206ENST00000474617 CIAO1O76071 339 aa26.4■■□□□ 1.82
CCM2-206ENST00000474617 EAF2Q96CJ1 260 aaPredicted RBP26.4■■□□□ 1.82
CCM2-206ENST00000474617 RBM42Q9BTD8 480 aaKnown RBP26.4■■□□□ 1.82
CCM2-206ENST00000474617 ERVV-1B6SEH8 477 aa26.39■■□□□ 1.82
CCM2-206ENST00000474617 PCCAP05165 728 aaPredicted RBP26.39■■□□□ 1.82
CCM2-206ENST00000474617 ZBTB3Q9H5J0 574 aa26.39■■□□□ 1.82
CCM2-206ENST00000474617 DOT1LQ8TEK3 1739 aa26.39■■□□□ 1.82
CCM2-206ENST00000474617 ADAMTS2O95450 1211 aa26.39■■□□□ 1.81
CCM2-206ENST00000474617 CYP19A1P11511 503 aaPredicted RBP26.39■■□□□ 1.81
CCM2-206ENST00000474617 IL6STP40189 918 aaPredicted RBP26.39■■□□□ 1.81
CCM2-206ENST00000474617 IL15P40933 162 aaPredicted RBP26.39■■□□□ 1.81
CCM2-206ENST00000474617 LMBR1LQ6UX01 489 aa26.39■■□□□ 1.81
CCM2-206ENST00000474617 GIGYF2Q6Y7W6 1299 aaKnown RBP26.39■■□□□ 1.81
CCM2-206ENST00000474617 CWC22Q9HCG8 908 aaKnown RBP26.39■■□□□ 1.81
CCM2-206ENST00000474617 PTMSP20962 102 aa26.38■■□□□ 1.81
CCM2-206ENST00000474617 CDHR2Q9BYE9 1310 aa26.37■■□□□ 1.81
CCM2-206ENST00000474617 ATP5JP18859 108 aa26.37■■□□□ 1.81
CCM2-206ENST00000474617 HSPA4P34932 840 aa26.37■■□□□ 1.81
CCM2-206ENST00000474617 TNNI3KQ59H18 835 aa26.37■■□□□ 1.81
CCM2-206ENST00000474617 FPGT-TNNI3KV9GXZ4 949 aa26.37■■□□□ 1.81
CCM2-206ENST00000474617 JCADQ9P266 1359 aa26.37■■□□□ 1.81
CCM2-206ENST00000474617 AEBP2Q6ZN18 517 aaPredicted RBP26.36■■□□□ 1.81
CCM2-206ENST00000474617 ZBTB38Q8NAP3 1195 aaPredicted RBP26.36■■□□□ 1.81
CCM2-206ENST00000474617 SIL1Q9H173 461 aa26.36■■□□□ 1.81
CCM2-206ENST00000474617 SNRKQ9NRH2 765 aa26.36■■□□□ 1.81
CCM2-206ENST00000474617 SMARCC1Q92922 1105 aaPredicted RBP26.35■■□□□ 1.81
CCM2-206ENST00000474617 FRAT2O75474 233 aaPredicted RBP26.34■■□□□ 1.81
CCM2-206ENST00000474617 PRIM1P49642 420 aaKnown RBP26.34■■□□□ 1.81
CCM2-206ENST00000474617 ANKRD36CQ5JPF3 1778 aa26.33■■□□□ 1.81
CCM2-206ENST00000474617 ZNF831Q5JPB2 1677 aa26.33■■□□□ 1.81
CCM2-206ENST00000474617 AK7Q96M32 723 aa26.33■■□□□ 1.81
CCM2-206ENST00000474617 CD2BP2O95400 341 aaKnown RBP26.32■■□□□ 1.8
CCM2-206ENST00000474617 CCDC8Q9H0W5 538 aaPredicted RBP26.32■■□□□ 1.8
CCM2-206ENST00000474617 DDX11L8A8MPP1 907 aa26.31■■□□□ 1.8
CCM2-206ENST00000474617 EYA2O00167 538 aa26.31■■□□□ 1.8
CCM2-206ENST00000474617 TFCP2Q12800 502 aa26.31■■□□□ 1.8
CCM2-206ENST00000474617 SYTL4Q96C24 671 aaPredicted RBP26.31■■□□□ 1.8
CCM2-206ENST00000474617 LSG1Q9H089 658 aaKnown RBP26.31■■□□□ 1.8
CCM2-206ENST00000474617 RREB1Q92766 1687 aa26.3■■□□□ 1.8
CCM2-206ENST00000474617 NUCB2P80303 420 aa26.3■■□□□ 1.8
CCM2-206ENST00000474617 RAB3GAP1Q15042 981 aa26.3■■□□□ 1.8
CCM2-206ENST00000474617 VPS72Q15906 364 aa26.3■■□□□ 1.8
CCM2-206ENST00000474617 CCDC57Q2TAC2 916 aa26.3■■□□□ 1.8
CCM2-206ENST00000474617 GBP4Q96PP9 640 aa26.3■■□□□ 1.8
CCM2-206ENST00000474617 PIP4K2BP78356 416 aa26.29■■□□□ 1.8
CCM2-206ENST00000474617 KLHDC4Q8TBB5 520 aa26.29■■□□□ 1.8
CCM2-206ENST00000474617 CHMP3Q9Y3E7 222 aa26.29■■□□□ 1.8
CCM2-206ENST00000474617 SPATA31A6Q5VVP1 1343 aa26.29■■□□□ 1.8
CCM2-206ENST00000474617 MAP4K4O95819 1239 aaPredicted RBP26.29■■□□□ 1.8
CCM2-206ENST00000474617 CSF1RP07333 972 aa26.29■■□□□ 1.8
CCM2-206ENST00000474617 HSP90B1P14625 803 aaKnown RBP26.29■■□□□ 1.8
CCM2-206ENST00000474617 CWC27Q6UX04 472 aaKnown RBP26.29■■□□□ 1.8
CCM2-206ENST00000474617 SPRYD3Q8NCJ5 442 aa26.29■■□□□ 1.8
CCM2-206ENST00000474617 SLC4A9Q96Q91 983 aa26.29■■□□□ 1.8
CCM2-206ENST00000474617 AKAP2Q9Y2D5 859 aa26.29■■□□□ 1.8
CCM2-206ENST00000474617 NUTM2BA6NNL0 878 aaPredicted RBP26.28■■□□□ 1.8
CCM2-206ENST00000474617 NUTM2EB1AL46 878 aaPredicted RBP26.28■■□□□ 1.8
CCM2-206ENST00000474617 UBAP1LF5GYI3 381 aa26.28■■□□□ 1.8
CCM2-206ENST00000474617 RGL2O15211 777 aa26.28■■□□□ 1.8
CCM2-206ENST00000474617 NEK4P51957 841 aa26.28■■□□□ 1.8
CCM2-206ENST00000474617 NUTM2AQ8IVF1 878 aaPredicted RBP26.28■■□□□ 1.8
CCM2-206ENST00000474617 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.28■■□□□ 1.8
CCM2-206ENST00000474617 DBNLQ9UJU6 430 aaKnown RBP26.28■■□□□ 1.8
CCM2-206ENST00000474617 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.27■■□□□ 1.8
CCM2-206ENST00000474617 MCM4P33991 863 aa26.27■■□□□ 1.8
CCM2-206ENST00000474617 ATG9AQ7Z3C6 839 aa26.27■■□□□ 1.8
CCM2-206ENST00000474617 MARCH10Q8NA82 808 aaPredicted RBP26.27■■□□□ 1.8
CCM2-206ENST00000474617 KCNB2Q92953 911 aa26.27■■□□□ 1.8
CCM2-206ENST00000474617 INTS4Q96HW7 963 aaKnown RBP26.27■■□□□ 1.8
CCM2-206ENST00000474617 SPEF2Q9C093 1822 aa26.26■■□□□ 1.79
CCM2-206ENST00000474617 CLEC17AQ6ZS10 378 aa26.26■■□□□ 1.79
CCM2-206ENST00000474617 NLRP10Q86W26 655 aa26.26■■□□□ 1.79
CCM2-206ENST00000474617 JARID2Q92833 1246 aaPredicted RBP26.26■■□□□ 1.79
CCM2-206ENST00000474617 HAUS7Q99871 368 aa26.26■■□□□ 1.79
CCM2-206ENST00000474617 FSD1Q9BTV5 496 aa26.26■■□□□ 1.79
CCM2-206ENST00000474617 ZNF330Q9Y3S2 320 aaPredicted RBP26.26■■□□□ 1.79
CCM2-206ENST00000474617 TM6SF1Q9BZW5 370 aa26.25■■□□□ 1.79
CCM2-206ENST00000474617 CCDC87Q9NVE4 849 aa26.25■■□□□ 1.79
CCM2-206ENST00000474617 ZBTB1Q9Y2K1 713 aa26.25■■□□□ 1.79
CCM2-206ENST00000474617 CCDC9Q9Y3X0 531 aaKnown RBP26.25■■□□□ 1.79
CCM2-206ENST00000474617 EIF5P55010 431 aaKnown RBP26.24■■□□□ 1.79
CCM2-206ENST00000474617 DZIP3Q86Y13 1208 aaKnown RBP26.24■■□□□ 1.79
CCM2-206ENST00000474617 BOLA2Q9H3K6 86 aa26.24■■□□□ 1.79
CCM2-206ENST00000474617 TLR7Q9NYK1 1049 aaKnown RBP26.24■■□□□ 1.79
CCM2-206ENST00000474617 DEKP35659 375 aaKnown RBP26.24■■□□□ 1.79
CCM2-206ENST00000474617 IFIT5Q13325 482 aaKnown RBP26.24■■□□□ 1.79
CCM2-206ENST00000474617 LRRFIP1Q32MZ4 808 aaKnown RBP26.24■■□□□ 1.79
CCM2-206ENST00000474617 FNBP4Q8N3X1 1017 aaPredicted RBP26.24■■□□□ 1.79
CCM2-206ENST00000474617 CEP126Q9P2H0 1117 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms