RNA–Protein interactions for RNA: ENST00000474345.5

FDPS-210, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-210ENST00000474345 ANKRD31Q8N7Z5 1873 aa19.33■□□□□ 0.69
FDPS-210ENST00000474345 CHRNA5P30532 468 aa19.33■□□□□ 0.68
FDPS-210ENST00000474345 BRPF1P55201 1214 aaPredicted RBP19.33■□□□□ 0.68
FDPS-210ENST00000474345 SLC10A5Q5PT55 438 aa19.33■□□□□ 0.68
FDPS-210ENST00000474345 SYNE4Q8N205 404 aa19.33■□□□□ 0.68
FDPS-210ENST00000474345 TRMT112Q9UI30 125 aaKnown RBP19.33■□□□□ 0.68
FDPS-210ENST00000474345 IBTKQ9P2D0 1353 aaPredicted RBP19.32■□□□□ 0.68
FDPS-210ENST00000474345 KIAA1551Q9HCM1 1747 aa19.32■□□□□ 0.68
FDPS-210ENST00000474345 PDE6BP35913 854 aa19.32■□□□□ 0.68
FDPS-210ENST00000474345 C2CD5Q86YS7 1000 aa19.32■□□□□ 0.68
FDPS-210ENST00000474345 CCDC191Q8NCU4 936 aa19.32■□□□□ 0.68
FDPS-210ENST00000474345 PXDNLA1KZ92 1463 aa19.31■□□□□ 0.68
FDPS-210ENST00000474345 BCAR3O75815 825 aa19.31■□□□□ 0.68
FDPS-210ENST00000474345 NEXNQ0ZGT2 675 aa19.31■□□□□ 0.68
FDPS-210ENST00000474345 CWF19L2Q2TBE0 894 aaKnown RBP19.31■□□□□ 0.68
FDPS-210ENST00000474345 NOB1Q9ULX3 412 aaKnown RBP19.31■□□□□ 0.68
FDPS-210ENST00000474345 KLRG2A4D1S0 409 aaPredicted RBP19.3■□□□□ 0.68
FDPS-210ENST00000474345 H0YIN7 160 aa19.3■□□□□ 0.68
FDPS-210ENST00000474345 FAM89AQ96GI7 184 aa19.3■□□□□ 0.68
FDPS-210ENST00000474345 CWC25Q9NXE8 425 aaPredicted RBP19.3■□□□□ 0.68
FDPS-210ENST00000474345 PDZRN3Q9UPQ7 1066 aa19.3■□□□□ 0.68
FDPS-210ENST00000474345 PTPRCP08575 1304 aa19.29■□□□□ 0.68
FDPS-210ENST00000474345 NEURL1BA8MQ27 555 aa19.29■□□□□ 0.68
FDPS-210ENST00000474345 BEND3Q5T5X7 828 aa19.29■□□□□ 0.68
FDPS-210ENST00000474345 JARID2Q92833 1246 aaPredicted RBP19.29■□□□□ 0.68
FDPS-210ENST00000474345 WWC3Q9ULE0 1092 aa19.29■□□□□ 0.68
FDPS-210ENST00000474345 ABCC12Q96J65 1359 aa19.29■□□□□ 0.68
FDPS-210ENST00000474345 SH3TC1Q8TE82 1336 aa19.28■□□□□ 0.68
FDPS-210ENST00000474345 SRGNP10124 158 aa19.28■□□□□ 0.68
FDPS-210ENST00000474345 RTL5Q5HYW3 569 aaPredicted RBP19.28■□□□□ 0.68
FDPS-210ENST00000474345 LINS1Q8NG48 757 aa19.28■□□□□ 0.68
FDPS-210ENST00000474345 PIM2Q9P1W9 311 aa19.28■□□□□ 0.68
FDPS-210ENST00000474345 RNF123Q5XPI4 1314 aa19.27■□□□□ 0.68
FDPS-210ENST00000474345 H7C1W4 665 aa19.27■□□□□ 0.68
FDPS-210ENST00000474345 PCCAP05165 728 aaPredicted RBP19.27■□□□□ 0.68
FDPS-210ENST00000474345 HCLS1P14317 486 aaPredicted RBP19.27■□□□□ 0.68
FDPS-210ENST00000474345 SLC4A10Q6U841 1118 aa19.27■□□□□ 0.68
FDPS-210ENST00000474345 C3orf67Q6ZVT6 689 aa19.27■□□□□ 0.68
FDPS-210ENST00000474345 ZBTB38Q8NAP3 1195 aaPredicted RBP19.27■□□□□ 0.68
FDPS-210ENST00000474345 NLRP3Q96P20 1036 aa19.27■□□□□ 0.68
FDPS-210ENST00000474345 GCKRQ14397 625 aa19.26■□□□□ 0.67
FDPS-210ENST00000474345 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
FDPS-210ENST00000474345 ZNF622Q969S3 477 aaKnown RBP eCLIP19.26■□□□□ 0.67
FDPS-210ENST00000474345 BRCA1P38398 1863 aaKnown RBP19.25■□□□□ 0.67
FDPS-210ENST00000474345 IRS4O14654 1257 aaPredicted RBP19.25■□□□□ 0.67
FDPS-210ENST00000474345 YBX3P16989 372 aaKnown RBP eCLIP19.25■□□□□ 0.67
FDPS-210ENST00000474345 GPR162Q16538 588 aa19.25■□□□□ 0.67
FDPS-210ENST00000474345 ARHGAP45Q92619 1136 aa19.25■□□□□ 0.67
FDPS-210ENST00000474345 MASTLQ96GX5 879 aa19.25■□□□□ 0.67
FDPS-210ENST00000474345 ALDH1L1O75891 902 aa19.24■□□□□ 0.67
FDPS-210ENST00000474345 STYK1Q6J9G0 422 aa19.24■□□□□ 0.67
FDPS-210ENST00000474345 TTLL6Q8N841 843 aa19.24■□□□□ 0.67
FDPS-210ENST00000474345 API5Q9BZZ5 524 aaKnown RBP19.24■□□□□ 0.67
FDPS-210ENST00000474345 SRCIN1Q9C0H9 1055 aa19.24■□□□□ 0.67
FDPS-210ENST00000474345 DCAF8L1A6NGE4 600 aa19.23■□□□□ 0.67
FDPS-210ENST00000474345 NPR1P16066 1061 aa19.23■□□□□ 0.67
FDPS-210ENST00000474345 CRY2Q49AN0 593 aa19.23■□□□□ 0.67
FDPS-210ENST00000474345 DALRD3Q5D0E6 543 aaKnown RBP19.23■□□□□ 0.67
FDPS-210ENST00000474345 BCS1LQ9Y276 419 aa19.23■□□□□ 0.67
FDPS-210ENST00000474345 RIC1Q4ADV7 1423 aa19.23■□□□□ 0.67
FDPS-210ENST00000474345 TNRC6CQ9HCJ0 1690 aaKnown RBP19.23■□□□□ 0.67
FDPS-210ENST00000474345 COL11A2P13942 1736 aaPredicted RBP19.22■□□□□ 0.67
FDPS-210ENST00000474345 DLEC1Q9Y238 1755 aa19.22■□□□□ 0.67
FDPS-210ENST00000474345 IPO8O15397 1037 aaKnown RBP19.22■□□□□ 0.67
FDPS-210ENST00000474345 HOXA10P31260 410 aaPredicted RBP19.22■□□□□ 0.67
FDPS-210ENST00000474345 CASP7P55210 303 aa19.22■□□□□ 0.67
FDPS-210ENST00000474345 FRAT1Q92837 279 aaPredicted RBP19.22■□□□□ 0.67
FDPS-210ENST00000474345 CNKSR1Q969H4 720 aa19.22■□□□□ 0.67
FDPS-210ENST00000474345 DDX60Q8IY21 1712 aaKnown RBP19.22■□□□□ 0.67
FDPS-210ENST00000474345 CDHR2Q9BYE9 1310 aa19.22■□□□□ 0.67
FDPS-210ENST00000474345 SF3B3Q15393 1217 aaKnown RBP19.21■□□□□ 0.67
FDPS-210ENST00000474345 UBE3BQ7Z3V4 1068 aa19.21■□□□□ 0.67
FDPS-210ENST00000474345 LAMB2P55268 1798 aa19.2■□□□□ 0.66
FDPS-210ENST00000474345 PDE8AO60658 829 aa19.2■□□□□ 0.66
FDPS-210ENST00000474345 ALDH1B1P30837 517 aa19.2■□□□□ 0.66
FDPS-210ENST00000474345 TNNQ9UQP3 1299 aa19.2■□□□□ 0.66
FDPS-210ENST00000474345 KIF16BQ96L93 1317 aa19.2■□□□□ 0.66
FDPS-210ENST00000474345 SLX4Q8IY92 1834 aa19.19■□□□□ 0.66
FDPS-210ENST00000474345 HSP90B1P14625 803 aaKnown RBP19.19■□□□□ 0.66
FDPS-210ENST00000474345 ZKSCAN2Q63HK3 967 aa19.19■□□□□ 0.66
FDPS-210ENST00000474345 ATF7IPQ6VMQ6 1270 aa19.19■□□□□ 0.66
FDPS-210ENST00000474345 RPGRQ92834 1020 aaKnown RBP19.19■□□□□ 0.66
FDPS-210ENST00000474345 RBM17Q96I25 401 aaKnown RBP19.19■□□□□ 0.66
FDPS-210ENST00000474345 CRAMP1Q96RY5 1269 aa19.19■□□□□ 0.66
FDPS-210ENST00000474345 RCAN3Q9UKA8 241 aa19.19■□□□□ 0.66
FDPS-210ENST00000474345 GRIN3BO60391 1043 aa19.18■□□□□ 0.66
FDPS-210ENST00000474345 TRIM27P14373 513 aa19.18■□□□□ 0.66
FDPS-210ENST00000474345 C9orf78Q9NZ63 289 aaPredicted RBP19.18■□□□□ 0.66
FDPS-210ENST00000474345 GRM8O00222 908 aa19.17■□□□□ 0.66
FDPS-210ENST00000474345 CCT4P50991 539 aaKnown RBP19.17■□□□□ 0.66
FDPS-210ENST00000474345 PLA2G12BQ9BX93 195 aa19.17■□□□□ 0.66
FDPS-210ENST00000474345 USP44Q9H0E7 712 aa19.17■□□□□ 0.66
FDPS-210ENST00000474345 ARFGEF1Q9Y6D6 1849 aa19.16■□□□□ 0.66
FDPS-210ENST00000474345 TAF1P21675 1872 aa19.16■□□□□ 0.66
FDPS-210ENST00000474345 CACNA1SQ13698 1873 aa19.16■□□□□ 0.66
FDPS-210ENST00000474345 NBPF7P0C2Y1 421 aaPredicted RBP19.16■□□□□ 0.66
FDPS-210ENST00000474345 PRPF40BQ6NWY9 871 aaKnown RBP19.16■□□□□ 0.66
FDPS-210ENST00000474345 DDX46Q7L014 1031 aaKnown RBP19.16■□□□□ 0.66
FDPS-210ENST00000474345 TTLL11Q8NHH1 800 aa19.16■□□□□ 0.66
FDPS-210ENST00000474345 C7orf43Q8WVR3 580 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms