RNA–Protein interactions for RNA: ENST00000474288.1

HUWE1-209, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 1,254 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-209ENST00000474288 KAZALD1Q96I82 304 aa13.32□□□□□ -0.28
HUWE1-209ENST00000474288 PLA2G12BQ9BX93 195 aa13.32□□□□□ -0.28
HUWE1-209ENST00000474288 ZNF330Q9Y3S2 320 aaPredicted RBP13.32□□□□□ -0.28
HUWE1-209ENST00000474288 CDHR2Q9BYE9 1310 aa13.32□□□□□ -0.28
HUWE1-209ENST00000474288 PCCAP05165 728 aaPredicted RBP13.31□□□□□ -0.28
HUWE1-209ENST00000474288 SF3B2Q13435 895 aaKnown RBP13.31□□□□□ -0.28
HUWE1-209ENST00000474288 RABL6Q3YEC7 729 aaPredicted RBP13.31□□□□□ -0.28
HUWE1-209ENST00000474288 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
HUWE1-209ENST00000474288 C9orf78Q9NZ63 289 aaPredicted RBP13.31□□□□□ -0.28
HUWE1-209ENST00000474288 B4GALNT3Q6L9W6 998 aa13.3□□□□□ -0.28
HUWE1-209ENST00000474288 CENPQQ7L2Z9 268 aaPredicted RBP13.3□□□□□ -0.28
HUWE1-209ENST00000474288 ZBTB38Q8NAP3 1195 aaPredicted RBP13.3□□□□□ -0.28
HUWE1-209ENST00000474288 C1orf115Q9H7X2 142 aa13.3□□□□□ -0.28
HUWE1-209ENST00000474288 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
HUWE1-209ENST00000474288 LRRFIP2Q9Y608 721 aaKnown RBP13.3□□□□□ -0.28
HUWE1-209ENST00000474288 DDX60Q8IY21 1712 aaKnown RBP13.3□□□□□ -0.28
HUWE1-209ENST00000474288 NTSR2O95665 410 aa13.29□□□□□ -0.28
HUWE1-209ENST00000474288 POLA2Q14181 598 aa13.29□□□□□ -0.28
HUWE1-209ENST00000474288 USPL1Q5W0Q7 1092 aa13.29□□□□□ -0.28
HUWE1-209ENST00000474288 SMC5Q8IY18 1101 aa13.29□□□□□ -0.28
HUWE1-209ENST00000474288 SSH3Q8TE77 659 aa13.29□□□□□ -0.28
HUWE1-209ENST00000474288 SUCLG2Q96I99 432 aa13.29□□□□□ -0.28
HUWE1-209ENST00000474288 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
HUWE1-209ENST00000474288 NRXN2Q9P2S2 1712 aa13.29□□□□□ -0.28
HUWE1-209ENST00000474288 PNPLA7Q6ZV29 1317 aa13.29□□□□□ -0.28
HUWE1-209ENST00000474288 RIC1Q4ADV7 1423 aa13.29□□□□□ -0.28
HUWE1-209ENST00000474288 MYH3P11055 1940 aa13.29□□□□□ -0.28
HUWE1-209ENST00000474288 ZPR1O75312 459 aa13.28□□□□□ -0.28
HUWE1-209ENST00000474288 IGHDP01880 384 aa13.28□□□□□ -0.28
HUWE1-209ENST00000474288 GYS1P13807 737 aa13.28□□□□□ -0.28
HUWE1-209ENST00000474288 RFC4P35249 363 aa13.28□□□□□ -0.28
HUWE1-209ENST00000474288 ATP8B2P98198 1209 aa13.28□□□□□ -0.28
HUWE1-209ENST00000474288 SLC15A2Q16348 729 aa13.28□□□□□ -0.28
HUWE1-209ENST00000474288 SMIM5Q71RC9 77 aa13.28□□□□□ -0.28
HUWE1-209ENST00000474288 DEFB132Q7Z7B7 95 aa13.28□□□□□ -0.28
HUWE1-209ENST00000474288 UPF1Q92900 1129 aaKnown RBP eCLIP13.28□□□□□ -0.28
HUWE1-209ENST00000474288 RWDD1Q9H446 243 aaPredicted RBP13.28□□□□□ -0.28
HUWE1-209ENST00000474288 EPHA10Q5JZY3 1008 aa13.27□□□□□ -0.29
HUWE1-209ENST00000474288 SUSD4Q5VX71 490 aa13.27□□□□□ -0.29
HUWE1-209ENST00000474288 TBC1D9BQ66K14 1250 aa13.27□□□□□ -0.29
HUWE1-209ENST00000474288 UBE3BQ7Z3V4 1068 aa13.27□□□□□ -0.29
HUWE1-209ENST00000474288 PIAS4Q8N2W9 510 aaPredicted RBP13.27□□□□□ -0.29
HUWE1-209ENST00000474288 NIP7Q9Y221 180 aaKnown RBP eCLIP13.27□□□□□ -0.29
HUWE1-209ENST00000474288 HMMRO75330 724 aa13.26□□□□□ -0.29
HUWE1-209ENST00000474288 GPTP24298 496 aa13.26□□□□□ -0.29
HUWE1-209ENST00000474288 TM4SF1P30408 202 aa13.26□□□□□ -0.29
HUWE1-209ENST00000474288 FOXO4P98177 505 aa13.26□□□□□ -0.29
HUWE1-209ENST00000474288 PPP1R42Q7Z4L9 355 aa13.26□□□□□ -0.29
HUWE1-209ENST00000474288 COL23A1Q86Y22 540 aaPredicted RBP13.26□□□□□ -0.29
HUWE1-209ENST00000474288 CARMIL3Q8ND23 1372 aa13.26□□□□□ -0.29
HUWE1-209ENST00000474288 BICC1Q9H694 974 aaKnown RBP13.26□□□□□ -0.29
HUWE1-209ENST00000474288 DCTPP1Q9H773 170 aa13.26□□□□□ -0.29
HUWE1-209ENST00000474288 TFCP2L1Q9NZI6 479 aa13.26□□□□□ -0.29
HUWE1-209ENST00000474288 CASZ1Q86V15 1759 aa13.25□□□□□ -0.29
HUWE1-209ENST00000474288 LRP5O75197 1615 aa13.25□□□□□ -0.29
HUWE1-209ENST00000474288 RTL9Q8NET4 1388 aa13.25□□□□□ -0.29
HUWE1-209ENST00000474288 SH3TC1Q8TE82 1336 aa13.25□□□□□ -0.29
HUWE1-209ENST00000474288 PNMA6EA0A0J9YXQ4 647 aa13.25□□□□□ -0.29
HUWE1-209ENST00000474288 PHF14O94880 888 aa13.25□□□□□ -0.29
HUWE1-209ENST00000474288 CSF1RP07333 972 aa13.25□□□□□ -0.29
HUWE1-209ENST00000474288 SLC10A5Q5PT55 438 aa13.25□□□□□ -0.29
HUWE1-209ENST00000474288 GCC1Q96CN9 775 aa13.25□□□□□ -0.29
HUWE1-209ENST00000474288 ARXQ96QS3 562 aa13.25□□□□□ -0.29
HUWE1-209ENST00000474288 UTP14AQ9BVJ6 771 aaKnown RBP13.25□□□□□ -0.29
HUWE1-209ENST00000474288 STK32BQ9NY57 414 aa13.25□□□□□ -0.29
HUWE1-209ENST00000474288 NOP58Q9Y2X3 529 aaKnown RBP13.25□□□□□ -0.29
HUWE1-209ENST00000474288 RFX5P48382 616 aaPredicted RBP13.24□□□□□ -0.29
HUWE1-209ENST00000474288 NFIXQ14938 502 aa13.24□□□□□ -0.29
HUWE1-209ENST00000474288 TRMT112Q9UI30 125 aaKnown RBP13.24□□□□□ -0.29
HUWE1-209ENST00000474288 IRS4O14654 1257 aaPredicted RBP13.23□□□□□ -0.29
HUWE1-209ENST00000474288 HSP90B1P14625 803 aaKnown RBP13.23□□□□□ -0.29
HUWE1-209ENST00000474288 NLGN1Q8N2Q7 840 aa13.23□□□□□ -0.29
HUWE1-209ENST00000474288 FAM89AQ96GI7 184 aa13.23□□□□□ -0.29
HUWE1-209ENST00000474288 SETDB2Q96T68 719 aa13.23□□□□□ -0.29
HUWE1-209ENST00000474288 NYXQ9GZU5 481 aa13.23□□□□□ -0.29
HUWE1-209ENST00000474288 SRGAP3O43295 1099 aa13.22□□□□□ -0.29
HUWE1-209ENST00000474288 PDE8AO60658 829 aa13.22□□□□□ -0.29
HUWE1-209ENST00000474288 COPRSQ9NQ92 184 aa13.22□□□□□ -0.29
HUWE1-209ENST00000474288 ABCC12Q96J65 1359 aa13.21□□□□□ -0.29
HUWE1-209ENST00000474288 POLRMTO00411 1230 aaKnown RBP13.21□□□□□ -0.29
HUWE1-209ENST00000474288 CTSWP56202 376 aa13.21□□□□□ -0.29
HUWE1-209ENST00000474288 DDR1Q08345 913 aa13.21□□□□□ -0.29
HUWE1-209ENST00000474288 SYNE4Q8N205 404 aa13.21□□□□□ -0.29
HUWE1-209ENST00000474288 TTLL11Q8NHH1 800 aa13.21□□□□□ -0.29
HUWE1-209ENST00000474288 JARID2Q92833 1246 aaPredicted RBP13.21□□□□□ -0.29
HUWE1-209ENST00000474288 TNRC6CQ9HCJ0 1690 aaKnown RBP13.21□□□□□ -0.3
HUWE1-209ENST00000474288 NUCB1Q02818 461 aa13.2□□□□□ -0.3
HUWE1-209ENST00000474288 PTPN12Q05209 780 aaKnown RBP13.2□□□□□ -0.3
HUWE1-209ENST00000474288 SF3B3Q15393 1217 aaKnown RBP13.2□□□□□ -0.3
HUWE1-209ENST00000474288 LMBR1LQ6UX01 489 aa13.2□□□□□ -0.3
HUWE1-209ENST00000474288 TPTE2Q6XPS3 522 aa13.2□□□□□ -0.3
HUWE1-209ENST00000474288 SLC16A10Q8TF71 515 aa13.2□□□□□ -0.3
HUWE1-209ENST00000474288 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
HUWE1-209ENST00000474288 ERFEQ4G0M1 354 aa13.19□□□□□ -0.3
HUWE1-209ENST00000474288 NBPF5PQ86XG9 351 aaPredicted RBP13.19□□□□□ -0.3
HUWE1-209ENST00000474288 ANKRD31Q8N7Z5 1873 aa13.19□□□□□ -0.3
HUWE1-209ENST00000474288 KLRG2A4D1S0 409 aaPredicted RBP13.18□□□□□ -0.3
HUWE1-209ENST00000474288 RAB11FIP3O75154 756 aa13.18□□□□□ -0.3
HUWE1-209ENST00000474288 HSP90AB4PQ58FF6 505 aa13.18□□□□□ -0.3
HUWE1-209ENST00000474288 PRR5LQ6MZQ0 368 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms