RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 DNAAF4Q8WXU2 420 aa15.81■□□□□ 0.12
DDX56-209ENST00000473924 WWC3Q9ULE0 1092 aa15.81■□□□□ 0.12
DDX56-209ENST00000473924 N4BP2Q86UW6 1770 aaPredicted RBP15.8■□□□□ 0.12
DDX56-209ENST00000473924 RNF123Q5XPI4 1314 aa15.8■□□□□ 0.12
DDX56-209ENST00000473924 H0YIN7 160 aa15.8■□□□□ 0.12
DDX56-209ENST00000473924 CHRNA5P30532 468 aa15.8■□□□□ 0.12
DDX56-209ENST00000473924 RARSP54136 660 aaKnown RBP15.8■□□□□ 0.12
DDX56-209ENST00000473924 TRIM28Q13263 835 aaKnown RBP15.8■□□□□ 0.12
DDX56-209ENST00000473924 C2CD5Q86YS7 1000 aa15.8■□□□□ 0.12
DDX56-209ENST00000473924 PTPRCP08575 1304 aa15.79■□□□□ 0.12
DDX56-209ENST00000473924 SH3TC1Q8TE82 1336 aa15.79■□□□□ 0.12
DDX56-209ENST00000473924 F6X3S4 739 aa15.79■□□□□ 0.12
DDX56-209ENST00000473924 GPR162Q16538 588 aa15.79■□□□□ 0.12
DDX56-209ENST00000473924 CCDC191Q8NCU4 936 aa15.79■□□□□ 0.12
DDX56-209ENST00000473924 CWC25Q9NXE8 425 aaPredicted RBP15.79■□□□□ 0.12
DDX56-209ENST00000473924 PDZRN3Q9UPQ7 1066 aa15.79■□□□□ 0.12
DDX56-209ENST00000473924 CWF19L2Q2TBE0 894 aaKnown RBP15.78■□□□□ 0.12
DDX56-209ENST00000473924 RTL5Q5HYW3 569 aaPredicted RBP15.78■□□□□ 0.12
DDX56-209ENST00000473924 SLC4A10Q6U841 1118 aa15.78■□□□□ 0.12
DDX56-209ENST00000473924 PIM2Q9P1W9 311 aa15.78■□□□□ 0.12
DDX56-209ENST00000473924 ANKRD31Q8N7Z5 1873 aa15.78■□□□□ 0.12
DDX56-209ENST00000473924 KIAA1551Q9HCM1 1747 aa15.77■□□□□ 0.12
DDX56-209ENST00000473924 ABCC12Q96J65 1359 aa15.77■□□□□ 0.12
DDX56-209ENST00000473924 IGKV5-2P06315 115 aa15.77■□□□□ 0.12
DDX56-209ENST00000473924 LINS1Q8NG48 757 aa15.77■□□□□ 0.12
DDX56-209ENST00000473924 ZNF622Q969S3 477 aaKnown RBP eCLIP15.77■□□□□ 0.12
DDX56-209ENST00000473924 FAM89AQ96GI7 184 aa15.77■□□□□ 0.12
DDX56-209ENST00000473924 KIF16BQ96L93 1317 aa15.76■□□□□ 0.11
DDX56-209ENST00000473924 NEURL1BA8MQ27 555 aa15.76■□□□□ 0.11
DDX56-209ENST00000473924 KCNA3P22001 575 aa15.76■□□□□ 0.11
DDX56-209ENST00000473924 ZBTB38Q8NAP3 1195 aaPredicted RBP15.76■□□□□ 0.11
DDX56-209ENST00000473924 NLRP3Q96P20 1036 aa15.76■□□□□ 0.11
DDX56-209ENST00000473924 NOB1Q9ULX3 412 aaKnown RBP15.76■□□□□ 0.11
DDX56-209ENST00000473924 BCS1LQ9Y276 419 aa15.76■□□□□ 0.11
DDX56-209ENST00000473924 PCCAP05165 728 aaPredicted RBP15.75■□□□□ 0.11
DDX56-209ENST00000473924 HCLS1P14317 486 aaPredicted RBP15.75■□□□□ 0.11
DDX56-209ENST00000473924 BRPF1P55201 1214 aaPredicted RBP15.75■□□□□ 0.11
DDX56-209ENST00000473924 SLC10A5Q5PT55 438 aa15.75■□□□□ 0.11
DDX56-209ENST00000473924 SYNE4Q8N205 404 aa15.75■□□□□ 0.11
DDX56-209ENST00000473924 RPGRQ92834 1020 aaKnown RBP15.75■□□□□ 0.11
DDX56-209ENST00000473924 FRAT1Q92837 279 aaPredicted RBP15.75■□□□□ 0.11
DDX56-209ENST00000473924 MASTLQ96GX5 879 aa15.75■□□□□ 0.11
DDX56-209ENST00000473924 KLRG2A4D1S0 409 aaPredicted RBP15.74■□□□□ 0.11
DDX56-209ENST00000473924 BCAR3O75815 825 aa15.74■□□□□ 0.11
DDX56-209ENST00000473924 SRGNP10124 158 aa15.74■□□□□ 0.11
DDX56-209ENST00000473924 HSP90B1P14625 803 aaKnown RBP15.74■□□□□ 0.11
DDX56-209ENST00000473924 NPR1P16066 1061 aa15.74■□□□□ 0.11
DDX56-209ENST00000473924 DALRD3Q5D0E6 543 aaKnown RBP15.74■□□□□ 0.11
DDX56-209ENST00000473924 BEND3Q5T5X7 828 aa15.74■□□□□ 0.11
DDX56-209ENST00000473924 TTLL6Q8N841 843 aa15.74■□□□□ 0.11
DDX56-209ENST00000473924 API5Q9BZZ5 524 aaKnown RBP15.74■□□□□ 0.11
DDX56-209ENST00000473924 SRCIN1Q9C0H9 1055 aa15.74■□□□□ 0.11
DDX56-209ENST00000473924 RIC1Q4ADV7 1423 aa15.74■□□□□ 0.11
DDX56-209ENST00000473924 TNRC6CQ9HCJ0 1690 aaKnown RBP15.73■□□□□ 0.11
DDX56-209ENST00000473924 IRS4O14654 1257 aaPredicted RBP15.73■□□□□ 0.11
DDX56-209ENST00000473924 IPO8O15397 1037 aaKnown RBP15.73■□□□□ 0.11
DDX56-209ENST00000473924 GCKRQ14397 625 aa15.73■□□□□ 0.11
DDX56-209ENST00000473924 STYK1Q6J9G0 422 aa15.73■□□□□ 0.11
DDX56-209ENST00000473924 JARID2Q92833 1246 aaPredicted RBP15.73■□□□□ 0.11
DDX56-209ENST00000473924 COL11A2P13942 1736 aaPredicted RBP15.73■□□□□ 0.11
DDX56-209ENST00000473924 DLEC1Q9Y238 1755 aa15.72■□□□□ 0.11
DDX56-209ENST00000473924 ALDH1L1O75891 902 aa15.72■□□□□ 0.11
DDX56-209ENST00000473924 YBX3P16989 372 aaKnown RBP eCLIP15.72■□□□□ 0.11
DDX56-209ENST00000473924 UBE3BQ7Z3V4 1068 aa15.72■□□□□ 0.11
DDX56-209ENST00000473924 CNKSR1Q969H4 720 aa15.72■□□□□ 0.11
DDX56-209ENST00000473924 BRCA1P38398 1863 aaKnown RBP15.71■□□□□ 0.11
DDX56-209ENST00000473924 GRIN3BO60391 1043 aa15.71■□□□□ 0.11
DDX56-209ENST00000473924 ALDH1B1P30837 517 aa15.71■□□□□ 0.11
DDX56-209ENST00000473924 CRY2Q49AN0 593 aa15.71■□□□□ 0.11
DDX56-209ENST00000473924 C3orf67Q6ZVT6 689 aa15.71■□□□□ 0.11
DDX56-209ENST00000473924 ARHGAP45Q92619 1136 aa15.71■□□□□ 0.11
DDX56-209ENST00000473924 RBM17Q96I25 401 aaKnown RBP15.71■□□□□ 0.11
DDX56-209ENST00000473924 C9orf78Q9NZ63 289 aaPredicted RBP15.71■□□□□ 0.11
DDX56-209ENST00000473924 H7C1W4 665 aa15.7■□□□□ 0.1
DDX56-209ENST00000473924 DDX60Q8IY21 1712 aaKnown RBP15.7■□□□□ 0.1
DDX56-209ENST00000473924 CDHR2Q9BYE9 1310 aa15.69■□□□□ 0.1
DDX56-209ENST00000473924 PDE8AO60658 829 aa15.69■□□□□ 0.1
DDX56-209ENST00000473924 CCT4P50991 539 aaKnown RBP15.69■□□□□ 0.1
DDX56-209ENST00000473924 ZKSCAN2Q63HK3 967 aa15.69■□□□□ 0.1
DDX56-209ENST00000473924 PRPF40BQ6NWY9 871 aaKnown RBP15.69■□□□□ 0.1
DDX56-209ENST00000473924 DDX46Q7L014 1031 aaKnown RBP15.69■□□□□ 0.1
DDX56-209ENST00000473924 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
DDX56-209ENST00000473924 RCAN3Q9UKA8 241 aa15.69■□□□□ 0.1
DDX56-209ENST00000473924 CACNA1SQ13698 1873 aa15.68■□□□□ 0.1
DDX56-209ENST00000473924 LAMB2P55268 1798 aa15.68■□□□□ 0.1
DDX56-209ENST00000473924 GRM8O00222 908 aa15.68■□□□□ 0.1
DDX56-209ENST00000473924 HOXA10P31260 410 aaPredicted RBP15.68■□□□□ 0.1
DDX56-209ENST00000473924 ATF7IPQ6VMQ6 1270 aa15.68■□□□□ 0.1
DDX56-209ENST00000473924 C21orf2O43822 256 aa15.67■□□□□ 0.1
DDX56-209ENST00000473924 TRIM27P14373 513 aa15.67■□□□□ 0.1
DDX56-209ENST00000473924 SF3B3Q15393 1217 aaKnown RBP15.67■□□□□ 0.1
DDX56-209ENST00000473924 ARHGAP27Q6ZUM4 889 aa15.67■□□□□ 0.1
DDX56-209ENST00000473924 CLUAP1Q96AJ1 413 aa15.67■□□□□ 0.1
DDX56-209ENST00000473924 CRAMP1Q96RY5 1269 aa15.67■□□□□ 0.1
DDX56-209ENST00000473924 ARFGEF1Q9Y6D6 1849 aa15.66■□□□□ 0.1
DDX56-209ENST00000473924 CTSWP56202 376 aa15.66■□□□□ 0.1
DDX56-209ENST00000473924 CCDC152Q4G0S7 254 aa15.66■□□□□ 0.1
DDX56-209ENST00000473924 CCDC85AQ96PX6 553 aaPredicted RBP15.66■□□□□ 0.1
DDX56-209ENST00000473924 ABCC4O15439 1325 aa15.66■□□□□ 0.1
DDX56-209ENST00000473924 CASP7P55210 303 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms