RNA–Protein interactions for RNA: ENST00000473278.1

CCDC142-206, Transcript of coiled-coil domain containing 142, humanhuman

TSL 2

Gene CCDC142, Length 810 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-206ENST00000473278 SYNE4Q8N205 404 aa16.18■□□□□ 0.18
CCDC142-206ENST00000473278 JMYQ8N9B5 988 aa16.18■□□□□ 0.18
CCDC142-206ENST00000473278 UTP14AQ9BVJ6 771 aaKnown RBP16.18■□□□□ 0.18
CCDC142-206ENST00000473278 TMX4Q9H1E5 349 aaPredicted RBP16.18■□□□□ 0.18
CCDC142-206ENST00000473278 PRKRIP1Q9H875 184 aaPredicted RBP16.18■□□□□ 0.18
CCDC142-206ENST00000473278 DDX21Q9NR30 783 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCDC142-206ENST00000473278 ZNF277Q9NRM2 450 aaPredicted RBP16.18■□□□□ 0.18
CCDC142-206ENST00000473278 TRIM35Q9UPQ4 493 aa16.18■□□□□ 0.18
CCDC142-206ENST00000473278 WDR90Q96KV7 1748 aa16.18■□□□□ 0.18
CCDC142-206ENST00000473278 IARSP41252 1262 aaKnown RBP16.17■□□□□ 0.18
CCDC142-206ENST00000473278 IFFO2Q5TF58 517 aa16.17■□□□□ 0.18
CCDC142-206ENST00000473278 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
CCDC142-206ENST00000473278 COPS6Q7L5N1 327 aa16.17■□□□□ 0.18
CCDC142-206ENST00000473278 JDP2Q8WYK2 163 aa16.17■□□□□ 0.18
CCDC142-206ENST00000473278 ARFGEF2Q9Y6D5 1785 aa16.16■□□□□ 0.18
CCDC142-206ENST00000473278 FZD9O00144 591 aa16.16■□□□□ 0.18
CCDC142-206ENST00000473278 PROSER3Q2NL68 480 aa16.16■□□□□ 0.18
CCDC142-206ENST00000473278 CFAP44Q96MT7 982 aa16.16■□□□□ 0.18
CCDC142-206ENST00000473278 TIAM2Q8IVF5 1701 aa16.16■□□□□ 0.18
CCDC142-206ENST00000473278 DICER1Q9UPY3 1922 aaKnown RBP16.15■□□□□ 0.18
CCDC142-206ENST00000473278 HTRA3P83110 453 aa16.15■□□□□ 0.18
CCDC142-206ENST00000473278 CCDC88AQ3V6T2 1871 aa16.15■□□□□ 0.18
CCDC142-206ENST00000473278 OLFM4Q6UX06 510 aa16.15■□□□□ 0.18
CCDC142-206ENST00000473278 XAGE3Q8WTP9 111 aa16.15■□□□□ 0.18
CCDC142-206ENST00000473278 VPS33BQ9H267 617 aa16.15■□□□□ 0.18
CCDC142-206ENST00000473278 LAS1LQ9Y4W2 734 aaKnown RBP16.15■□□□□ 0.18
CCDC142-206ENST00000473278 CALD1Q05682 793 aaKnown RBP16.14■□□□□ 0.17
CCDC142-206ENST00000473278 TCIRG1Q13488 830 aa16.14■□□□□ 0.17
CCDC142-206ENST00000473278 LDHDQ86WU2 507 aa16.14■□□□□ 0.17
CCDC142-206ENST00000473278 GPC2Q8N158 579 aa16.14■□□□□ 0.17
CCDC142-206ENST00000473278 TAF1DQ9H5J8 278 aaPredicted RBP16.14■□□□□ 0.17
CCDC142-206ENST00000473278 DBF4Q9UBU7 674 aaPredicted RBP16.14■□□□□ 0.17
CCDC142-206ENST00000473278 NUP98P52948 1817 aa16.13■□□□□ 0.17
CCDC142-206ENST00000473278 PPEF1O14829 653 aaPredicted RBP16.13■□□□□ 0.17
CCDC142-206ENST00000473278 BBOX1O75936 387 aa16.13■□□□□ 0.17
CCDC142-206ENST00000473278 ANXA1P04083 346 aa16.13■□□□□ 0.17
CCDC142-206ENST00000473278 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
CCDC142-206ENST00000473278 HDGFL1Q5TGJ6 251 aa16.13■□□□□ 0.17
CCDC142-206ENST00000473278 PNMA8AQ86V59 439 aaPredicted RBP16.13■□□□□ 0.17
CCDC142-206ENST00000473278 NLRP10Q86W26 655 aa16.13■□□□□ 0.17
CCDC142-206ENST00000473278 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
CCDC142-206ENST00000473278 HACL1Q9UJ83 578 aa16.13■□□□□ 0.17
CCDC142-206ENST00000473278 SNED1Q8TER0 1413 aa16.12■□□□□ 0.17
CCDC142-206ENST00000473278 EIF6P56537 245 aaKnown RBP16.12■□□□□ 0.17
CCDC142-206ENST00000473278 PLBD2Q8NHP8 589 aa16.12■□□□□ 0.17
CCDC142-206ENST00000473278 NECTIN2Q92692 538 aa16.12■□□□□ 0.17
CCDC142-206ENST00000473278 HYPKQ9NX55 129 aa16.12■□□□□ 0.17
CCDC142-206ENST00000473278 ATP6V0A2Q9Y487 856 aa16.12■□□□□ 0.17
CCDC142-206ENST00000473278 SH3TC1Q8TE82 1336 aa16.12■□□□□ 0.17
CCDC142-206ENST00000473278 ANKRD13DQ6ZTN6 518 aa16.11■□□□□ 0.17
CCDC142-206ENST00000473278 LARGE2Q8N3Y3 721 aa16.11■□□□□ 0.17
CCDC142-206ENST00000473278 SUPT20HQ8NEM7 779 aa16.11■□□□□ 0.17
CCDC142-206ENST00000473278 CREBZFQ9NS37 354 aa16.11■□□□□ 0.17
CCDC142-206ENST00000473278 CHPF2Q9P2E5 772 aa16.11■□□□□ 0.17
CCDC142-206ENST00000473278 TRMT112Q9UI30 125 aaKnown RBP16.11■□□□□ 0.17
CCDC142-206ENST00000473278 ZNF541Q9H0D2 1346 aa16.11■□□□□ 0.17
CCDC142-206ENST00000473278 EPHX2P34913 555 aa16.1■□□□□ 0.17
CCDC142-206ENST00000473278 KRT24Q2M2I5 525 aa16.1■□□□□ 0.17
CCDC142-206ENST00000473278 C3orf67Q6ZVT6 689 aa16.1■□□□□ 0.17
CCDC142-206ENST00000473278 TMC4Q7Z404 712 aa16.1■□□□□ 0.17
CCDC142-206ENST00000473278 IFT57Q9NWB7 429 aa16.1■□□□□ 0.17
CCDC142-206ENST00000473278 ZNF853P0CG23 659 aa16.09■□□□□ 0.17
CCDC142-206ENST00000473278 GNAI1P63096 354 aa16.09■□□□□ 0.17
CCDC142-206ENST00000473278 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
CCDC142-206ENST00000473278 DDX46Q7L014 1031 aaKnown RBP16.09■□□□□ 0.17
CCDC142-206ENST00000473278 SP8Q8IXZ3 490 aa16.09■□□□□ 0.17
CCDC142-206ENST00000473278 APAF1O14727 1248 aa16.08■□□□□ 0.16
CCDC142-206ENST00000473278 POTEIP0CG38 1075 aa16.08■□□□□ 0.16
CCDC142-206ENST00000473278 POTEJP0CG39 1038 aa16.08■□□□□ 0.16
CCDC142-206ENST00000473278 TRIM28Q13263 835 aaKnown RBP16.08■□□□□ 0.16
CCDC142-206ENST00000473278 EAPPQ56P03 285 aaPredicted RBP16.08■□□□□ 0.16
CCDC142-206ENST00000473278 NIM1KQ8IY84 436 aa16.08■□□□□ 0.16
CCDC142-206ENST00000473278 RTFDC1Q9BY42 306 aaPredicted RBP16.08■□□□□ 0.16
CCDC142-206ENST00000473278 MBIPQ9NS73 344 aa16.08■□□□□ 0.16
CCDC142-206ENST00000473278 ABCC4O15439 1325 aa16.08■□□□□ 0.16
CCDC142-206ENST00000473278 SCN4AP35499 1836 aa16.08■□□□□ 0.16
CCDC142-206ENST00000473278 CACNA1SQ13698 1873 aa16.08■□□□□ 0.16
CCDC142-206ENST00000473278 TCERG1O14776 1098 aaKnown RBP16.07■□□□□ 0.16
CCDC142-206ENST00000473278 HCLS1P14317 486 aaPredicted RBP16.07■□□□□ 0.16
CCDC142-206ENST00000473278 LMOD1P29536 600 aaPredicted RBP16.07■□□□□ 0.16
CCDC142-206ENST00000473278 ISCA1Q9BUE6 129 aa16.07■□□□□ 0.16
CCDC142-206ENST00000473278 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
CCDC142-206ENST00000473278 PASKQ96RG2 1323 aa16.07■□□□□ 0.16
CCDC142-206ENST00000473278 PPIP5K2O43314 1243 aa16.06■□□□□ 0.16
CCDC142-206ENST00000473278 ITGBL1O95965 494 aaPredicted RBP16.06■□□□□ 0.16
CCDC142-206ENST00000473278 HSP90B1P14625 803 aaKnown RBP16.06■□□□□ 0.16
CCDC142-206ENST00000473278 GRAPQ13588 217 aa16.06■□□□□ 0.16
CCDC142-206ENST00000473278 DPP8Q6V1X1 898 aaPredicted RBP16.06■□□□□ 0.16
CCDC142-206ENST00000473278 MPNDQ8N594 471 aa16.06■□□□□ 0.16
CCDC142-206ENST00000473278 GRAPLQ8TC17 118 aaPredicted RBP16.06■□□□□ 0.16
CCDC142-206ENST00000473278 GJA3Q9Y6H8 435 aa16.06■□□□□ 0.16
CCDC142-206ENST00000473278 SF3B3Q15393 1217 aaKnown RBP16.05■□□□□ 0.16
CCDC142-206ENST00000473278 DIEXFQ68CQ4 756 aaKnown RBP16.05■□□□□ 0.16
CCDC142-206ENST00000473278 ZNRF3Q9ULT6 936 aa16.05■□□□□ 0.16
CCDC142-206ENST00000473278 TMEM88BA6NKF7 163 aa16.04■□□□□ 0.16
CCDC142-206ENST00000473278 GOLGA2Q08379 1002 aa16.04■□□□□ 0.16
CCDC142-206ENST00000473278 CNTROBQ8N137 903 aa16.04■□□□□ 0.16
CCDC142-206ENST00000473278 KIAA2012Q0VF49 1180 aa16.03■□□□□ 0.16
CCDC142-206ENST00000473278 USP50Q70EL3 339 aaPredicted RBP16.03■□□□□ 0.16
CCDC142-206ENST00000473278 RIC3Q7Z5B4 369 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms