RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
APTX-216ENST00000472896 USP42Q9H9J4 1324 aaKnown RBP12.39□□□□□ -0.43
APTX-216ENST00000472896 ZNF831Q5JPB2 1677 aa12.38□□□□□ -0.43
APTX-216ENST00000472896 GLTPD2A6NH11 291 aa12.38□□□□□ -0.43
APTX-216ENST00000472896 POTECB2RU33 542 aa12.38□□□□□ -0.43
APTX-216ENST00000472896 VEGFAP15692 232 aaPredicted RBP12.38□□□□□ -0.43
APTX-216ENST00000472896 CABP4P57796 275 aa12.38□□□□□ -0.43
APTX-216ENST00000472896 INTS5Q6P9B9 1019 aaKnown RBP12.38□□□□□ -0.43
APTX-216ENST00000472896 CNKSR2Q8WXI2 1034 aa12.38□□□□□ -0.43
APTX-216ENST00000472896 ZKSCAN5Q9Y2L8 839 aa12.38□□□□□ -0.43
APTX-216ENST00000472896 KDM6AO15550 1401 aaPredicted RBP12.38□□□□□ -0.43
APTX-216ENST00000472896 CCDC39Q9UFE4 941 aa12.38□□□□□ -0.43
APTX-216ENST00000472896 TNRC6CQ9HCJ0 1690 aaKnown RBP12.37□□□□□ -0.43
APTX-216ENST00000472896 RARSP54136 660 aaKnown RBP12.37□□□□□ -0.43
APTX-216ENST00000472896 ANKRD26Q9UPS8 1709 aa12.37□□□□□ -0.43
APTX-216ENST00000472896 LETM1O95202 739 aaPredicted RBP12.36□□□□□ -0.43
APTX-216ENST00000472896 HDAC1Q13547 482 aaPredicted RBP12.36□□□□□ -0.43
APTX-216ENST00000472896 ZNF530Q6P9A1 599 aaPredicted RBP12.36□□□□□ -0.43
APTX-216ENST00000472896 NFATC2IPQ8NCF5 419 aa12.36□□□□□ -0.43
APTX-216ENST00000472896 LMNB1P20700 586 aa12.35□□□□□ -0.43
APTX-216ENST00000472896 PLEKHO1Q53GL0 409 aaPredicted RBP12.35□□□□□ -0.43
APTX-216ENST00000472896 TAF3Q5VWG9 929 aa12.35□□□□□ -0.43
APTX-216ENST00000472896 USPL1Q5W0Q7 1092 aa12.35□□□□□ -0.43
APTX-216ENST00000472896 PDE4CQ08493 712 aa12.35□□□□□ -0.43
APTX-216ENST00000472896 CCDC146Q8IYE0 955 aa12.35□□□□□ -0.43
APTX-216ENST00000472896 DDX49Q9Y6V7 483 aaKnown RBP12.35□□□□□ -0.43
APTX-216ENST00000472896 PCNTO95613 3336 aa12.34□□□□□ -0.43
APTX-216ENST00000472896 ADAMTS7Q9UKP4 1686 aa12.34□□□□□ -0.43
APTX-216ENST00000472896 MTHFSP49914 203 aa12.34□□□□□ -0.43
APTX-216ENST00000472896 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
APTX-216ENST00000472896 NFIXQ14938 502 aa12.34□□□□□ -0.43
APTX-216ENST00000472896 WDR63Q8IWG1 891 aa12.34□□□□□ -0.43
APTX-216ENST00000472896 WWC1Q8IX03 1113 aa12.34□□□□□ -0.43
APTX-216ENST00000472896 DNAJC10Q8IXB1 793 aa12.34□□□□□ -0.43
APTX-216ENST00000472896 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
APTX-216ENST00000472896 KIF16BQ96L93 1317 aa12.34□□□□□ -0.43
APTX-216ENST00000472896 ZC3H4Q9UPT8 1303 aaKnown RBP12.34□□□□□ -0.43
APTX-216ENST00000472896 K7ELQ4 463 aaPredicted RBP12.33□□□□□ -0.44
APTX-216ENST00000472896 ZSCAN20P17040 1043 aaPredicted RBP12.33□□□□□ -0.44
APTX-216ENST00000472896 NFKBIEO00221 500 aa12.33□□□□□ -0.44
APTX-216ENST00000472896 CT47B1P0C2W7 299 aaPredicted RBP12.33□□□□□ -0.44
APTX-216ENST00000472896 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
APTX-216ENST00000472896 MYRIPQ8NFW9 859 aa12.33□□□□□ -0.44
APTX-216ENST00000472896 PRIMPOLQ96LW4 560 aa12.33□□□□□ -0.44
APTX-216ENST00000472896 BCL2L12Q9HB09 334 aa12.33□□□□□ -0.44
APTX-216ENST00000472896 ZPR1O75312 459 aa12.32□□□□□ -0.44
APTX-216ENST00000472896 BAG4O95429 457 aaKnown RBP12.32□□□□□ -0.44
APTX-216ENST00000472896 HMGN5P82970 282 aaKnown RBP12.32□□□□□ -0.44
APTX-216ENST00000472896 TTLL6Q8N841 843 aa12.32□□□□□ -0.44
APTX-216ENST00000472896 MKRN1Q9UHC7 482 aaKnown RBP12.32□□□□□ -0.44
APTX-216ENST00000472896 CCDC88AQ3V6T2 1871 aa12.32□□□□□ -0.44
APTX-216ENST00000472896 SOS1Q07889 1333 aaPredicted RBP12.32□□□□□ -0.44
APTX-216ENST00000472896 TJP1Q07157 1748 aa12.31□□□□□ -0.44
APTX-216ENST00000472896 FOXN1O15353 648 aa12.31□□□□□ -0.44
APTX-216ENST00000472896 SERPINB2P05120 415 aa12.31□□□□□ -0.44
APTX-216ENST00000472896 NUCB2P80303 420 aa12.31□□□□□ -0.44
APTX-216ENST00000472896 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
APTX-216ENST00000472896 C2CD5Q86YS7 1000 aa12.31□□□□□ -0.44
APTX-216ENST00000472896 ZHX1Q9UKY1 873 aaPredicted RBP12.31□□□□□ -0.44
APTX-216ENST00000472896 AFDNP55196 1824 aaKnown RBP12.3□□□□□ -0.44
APTX-216ENST00000472896 POTEIP0CG38 1075 aa12.3□□□□□ -0.44
APTX-216ENST00000472896 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
APTX-216ENST00000472896 CYP19A1P11511 503 aaPredicted RBP12.3□□□□□ -0.44
APTX-216ENST00000472896 GTF2F1P35269 517 aaKnown RBP eCLIP12.3□□□□□ -0.44
APTX-216ENST00000472896 CCDC27Q2M243 656 aa12.3□□□□□ -0.44
APTX-216ENST00000472896 RNF216Q9NWF9 866 aaPredicted RBP12.3□□□□□ -0.44
APTX-216ENST00000472896 RLBP1P12271 317 aa12.3□□□□□ -0.44
APTX-216ENST00000472896 NARFQ9UHQ1 456 aa12.3□□□□□ -0.44
APTX-216ENST00000472896 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
APTX-216ENST00000472896 ZSCAN23Q3MJ62 389 aa12.29□□□□□ -0.44
APTX-216ENST00000472896 C1orf141Q5JVX7 400 aa12.29□□□□□ -0.44
APTX-216ENST00000472896 PPP4R3BQ5MIZ7 849 aa12.29□□□□□ -0.44
APTX-216ENST00000472896 ZKSCAN2Q63HK3 967 aa12.29□□□□□ -0.44
APTX-216ENST00000472896 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
APTX-216ENST00000472896 LGR6Q9HBX8 967 aa12.29□□□□□ -0.44
APTX-216ENST00000472896 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
APTX-216ENST00000472896 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
APTX-216ENST00000472896 CARMIL3Q8ND23 1372 aa12.29□□□□□ -0.44
APTX-216ENST00000472896 TULP1O00294 542 aaPredicted RBP12.28□□□□□ -0.44
APTX-216ENST00000472896 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
APTX-216ENST00000472896 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
APTX-216ENST00000472896 RBSNQ9H1K0 784 aa12.28□□□□□ -0.44
APTX-216ENST00000472896 H0YIN7 160 aa12.28□□□□□ -0.44
APTX-216ENST00000472896 KIAA2012Q0VF49 1180 aa12.28□□□□□ -0.44
APTX-216ENST00000472896 DZIP1LQ8IYY4 767 aaKnown RBP12.28□□□□□ -0.44
APTX-216ENST00000472896 RUNDC1Q96C34 613 aa12.28□□□□□ -0.44
APTX-216ENST00000472896 DDX19BQ9UMR2 479 aa12.28□□□□□ -0.44
APTX-216ENST00000472896 ZBTB1Q9Y2K1 713 aa12.28□□□□□ -0.44
APTX-216ENST00000472896 NRXN2Q9P2S2 1712 aa12.28□□□□□ -0.44
APTX-216ENST00000472896 C21orf2O43822 256 aa12.27□□□□□ -0.45
APTX-216ENST00000472896 DDNO94850 711 aaPredicted RBP12.27□□□□□ -0.45
APTX-216ENST00000472896 SULT6B1Q6IMI4 303 aa12.27□□□□□ -0.45
APTX-216ENST00000472896 BICDL1Q6ZP65 573 aa12.27□□□□□ -0.45
APTX-216ENST00000472896 CCDC24Q8N4L8 307 aa12.27□□□□□ -0.45
APTX-216ENST00000472896 PRDM10Q9NQV6 1147 aa12.27□□□□□ -0.45
APTX-216ENST00000472896 TIAM2Q8IVF5 1701 aa12.26□□□□□ -0.45
APTX-216ENST00000472896 SLC34A2O95436 690 aa12.26□□□□□ -0.45
APTX-216ENST00000472896 ERFEQ4G0M1 354 aa12.26□□□□□ -0.45
APTX-216ENST00000472896 BMP2KLQ5H9B9 411 aa12.26□□□□□ -0.45
APTX-216ENST00000472896 LRSAM1Q6UWE0 723 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms