RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 SMC1BQ8NDV3 1235 aa11.64□□□□□ -0.55
CHEK2-223ENST00000472807 C7orf43Q8WVR3 580 aa11.64□□□□□ -0.55
CHEK2-223ENST00000472807 RPGRQ92834 1020 aaKnown RBP11.64□□□□□ -0.55
CHEK2-223ENST00000472807 TRIM35Q9UPQ4 493 aa11.64□□□□□ -0.55
CHEK2-223ENST00000472807 ANXA1P04083 346 aa11.63□□□□□ -0.55
CHEK2-223ENST00000472807 FKBP4Q02790 459 aaKnown RBP eCLIP11.63□□□□□ -0.55
CHEK2-223ENST00000472807 PDIA6Q15084 440 aa11.63□□□□□ -0.55
CHEK2-223ENST00000472807 SUSD4Q5VX71 490 aa11.63□□□□□ -0.55
CHEK2-223ENST00000472807 POTEHQ6S545 545 aa11.63□□□□□ -0.55
CHEK2-223ENST00000472807 LRP10Q7Z4F1 713 aa11.63□□□□□ -0.55
CHEK2-223ENST00000472807 ZNF34Q8IZ26 560 aa11.63□□□□□ -0.55
CHEK2-223ENST00000472807 NECTIN2Q92692 538 aa11.63□□□□□ -0.55
CHEK2-223ENST00000472807 ANKRD36CQ5JPF3 1778 aa11.63□□□□□ -0.55
CHEK2-223ENST00000472807 NTSR2O95665 410 aa11.62□□□□□ -0.55
CHEK2-223ENST00000472807 HOXB7P09629 217 aa11.62□□□□□ -0.55
CHEK2-223ENST00000472807 HSP90AB3PQ58FF7 597 aa11.62□□□□□ -0.55
CHEK2-223ENST00000472807 HDGFL1Q5TGJ6 251 aa11.62□□□□□ -0.55
CHEK2-223ENST00000472807 XAGE3Q8WTP9 111 aa11.62□□□□□ -0.55
CHEK2-223ENST00000472807 UTP14AQ9BVJ6 771 aaKnown RBP11.62□□□□□ -0.55
CHEK2-223ENST00000472807 DDX21Q9NR30 783 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHEK2-223ENST00000472807 RNF123Q5XPI4 1314 aa11.61□□□□□ -0.55
CHEK2-223ENST00000472807 ZEB1P37275 1124 aaPredicted RBP11.61□□□□□ -0.55
CHEK2-223ENST00000472807 CALD1Q05682 793 aaKnown RBP11.61□□□□□ -0.55
CHEK2-223ENST00000472807 AIMP1Q12904 312 aaKnown RBP11.61□□□□□ -0.55
CHEK2-223ENST00000472807 KRT24Q2M2I5 525 aa11.61□□□□□ -0.55
CHEK2-223ENST00000472807 OLFM4Q6UX06 510 aa11.61□□□□□ -0.55
CHEK2-223ENST00000472807 COPS6Q7L5N1 327 aa11.61□□□□□ -0.55
CHEK2-223ENST00000472807 RBM17Q96I25 401 aaKnown RBP11.61□□□□□ -0.55
CHEK2-223ENST00000472807 CFAP44Q96MT7 982 aa11.61□□□□□ -0.55
CHEK2-223ENST00000472807 ZNF277Q9NRM2 450 aaPredicted RBP11.61□□□□□ -0.55
CHEK2-223ENST00000472807 CHPF2Q9P2E5 772 aa11.61□□□□□ -0.55
CHEK2-223ENST00000472807 HOXA10P31260 410 aaPredicted RBP11.6□□□□□ -0.55
CHEK2-223ENST00000472807 GRIPAP1Q4V328 841 aa11.6□□□□□ -0.55
CHEK2-223ENST00000472807 CC2D2BQ6DHV5 1058 aa11.6□□□□□ -0.55
CHEK2-223ENST00000472807 NLRP3Q96P20 1036 aa11.6□□□□□ -0.55
CHEK2-223ENST00000472807 PSMD1Q99460 953 aa11.6□□□□□ -0.55
CHEK2-223ENST00000472807 IQCA1LA6NCM1 817 aa11.59□□□□□ -0.55
CHEK2-223ENST00000472807 APAF1O14727 1248 aa11.59□□□□□ -0.55
CHEK2-223ENST00000472807 PPEF1O14829 653 aaPredicted RBP11.59□□□□□ -0.55
CHEK2-223ENST00000472807 IARSP41252 1262 aaKnown RBP11.59□□□□□ -0.55
CHEK2-223ENST00000472807 CRAMP1Q96RY5 1269 aa11.59□□□□□ -0.55
CHEK2-223ENST00000472807 TMX4Q9H1E5 349 aaPredicted RBP11.59□□□□□ -0.55
CHEK2-223ENST00000472807 MBIPQ9NS73 344 aa11.59□□□□□ -0.55
CHEK2-223ENST00000472807 IFT57Q9NWB7 429 aa11.59□□□□□ -0.55
CHEK2-223ENST00000472807 DBF4Q9UBU7 674 aaPredicted RBP11.59□□□□□ -0.55
CHEK2-223ENST00000472807 POTECB2RU33 542 aa11.58□□□□□ -0.56
CHEK2-223ENST00000472807 DDNO94850 711 aaPredicted RBP11.58□□□□□ -0.56
CHEK2-223ENST00000472807 GNAI1P63096 354 aa11.58□□□□□ -0.56
CHEK2-223ENST00000472807 TCIRG1Q13488 830 aa11.58□□□□□ -0.56
CHEK2-223ENST00000472807 DUSP27Q5VZP5 1158 aa11.58□□□□□ -0.56
CHEK2-223ENST00000472807 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.56
CHEK2-223ENST00000472807 NLRP10Q86W26 655 aa11.58□□□□□ -0.56
CHEK2-223ENST00000472807 SYNE4Q8N205 404 aa11.58□□□□□ -0.56
CHEK2-223ENST00000472807 HYPKQ9NX55 129 aa11.58□□□□□ -0.56
CHEK2-223ENST00000472807 TRMT112Q9UI30 125 aaKnown RBP11.58□□□□□ -0.56
CHEK2-223ENST00000472807 SNED1Q8TER0 1413 aa11.58□□□□□ -0.56
CHEK2-223ENST00000472807 SCN4AP35499 1836 aa11.58□□□□□ -0.56
CHEK2-223ENST00000472807 SLC10A5Q5PT55 438 aa11.57□□□□□ -0.56
CHEK2-223ENST00000472807 PLBD2Q8NHP8 589 aa11.57□□□□□ -0.56
CHEK2-223ENST00000472807 JDP2Q8WYK2 163 aa11.57□□□□□ -0.56
CHEK2-223ENST00000472807 L3MBTL3Q96JM7 780 aaPredicted RBP11.57□□□□□ -0.56
CHEK2-223ENST00000472807 SH3TC1Q8TE82 1336 aa11.57□□□□□ -0.56
CHEK2-223ENST00000472807 ZNF541Q9H0D2 1346 aa11.57□□□□□ -0.56
CHEK2-223ENST00000472807 LAMB2P55268 1798 aa11.56□□□□□ -0.56
CHEK2-223ENST00000472807 TCERG1O14776 1098 aaKnown RBP11.56□□□□□ -0.56
CHEK2-223ENST00000472807 ZNF853P0CG23 659 aa11.56□□□□□ -0.56
CHEK2-223ENST00000472807 HTRA3P83110 453 aa11.56□□□□□ -0.56
CHEK2-223ENST00000472807 DNAJC5GQ8N7S2 189 aa11.56□□□□□ -0.56
CHEK2-223ENST00000472807 KLRG1Q96E93 195 aa11.56□□□□□ -0.56
CHEK2-223ENST00000472807 ABCC4O15439 1325 aa11.56□□□□□ -0.56
CHEK2-223ENST00000472807 FZD9O00144 591 aa11.55□□□□□ -0.56
CHEK2-223ENST00000472807 HCLS1P14317 486 aaPredicted RBP11.55□□□□□ -0.56
CHEK2-223ENST00000472807 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
CHEK2-223ENST00000472807 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
CHEK2-223ENST00000472807 ANKRD13DQ6ZTN6 518 aa11.55□□□□□ -0.56
CHEK2-223ENST00000472807 LARGE2Q8N3Y3 721 aa11.55□□□□□ -0.56
CHEK2-223ENST00000472807 CHMP4AQ9BY43 222 aa11.55□□□□□ -0.56
CHEK2-223ENST00000472807 HACL1Q9UJ83 578 aa11.55□□□□□ -0.56
CHEK2-223ENST00000472807 EIF6P56537 245 aaKnown RBP11.54□□□□□ -0.56
CHEK2-223ENST00000472807 DDX46Q7L014 1031 aaKnown RBP11.54□□□□□ -0.56
CHEK2-223ENST00000472807 LDHDQ86WU2 507 aa11.54□□□□□ -0.56
CHEK2-223ENST00000472807 GPC2Q8N158 579 aa11.54□□□□□ -0.56
CHEK2-223ENST00000472807 TAF1DQ9H5J8 278 aaPredicted RBP11.54□□□□□ -0.56
CHEK2-223ENST00000472807 ATP6V0A2Q9Y487 856 aa11.54□□□□□ -0.56
CHEK2-223ENST00000472807 DDX60Q8IY21 1712 aaKnown RBP11.53□□□□□ -0.56
CHEK2-223ENST00000472807 ELL2O00472 640 aaPredicted RBP11.53□□□□□ -0.56
CHEK2-223ENST00000472807 PPIP5K2O43314 1243 aa11.53□□□□□ -0.56
CHEK2-223ENST00000472807 ANP32CO43423 234 aa11.53□□□□□ -0.56
CHEK2-223ENST00000472807 BBOX1O75936 387 aa11.53□□□□□ -0.56
CHEK2-223ENST00000472807 POTEIP0CG38 1075 aa11.53□□□□□ -0.56
CHEK2-223ENST00000472807 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
CHEK2-223ENST00000472807 EAPPQ56P03 285 aaPredicted RBP11.53□□□□□ -0.56
CHEK2-223ENST00000472807 RIC3Q7Z5B4 369 aa11.53□□□□□ -0.56
CHEK2-223ENST00000472807 NIM1KQ8IY84 436 aa11.53□□□□□ -0.56
CHEK2-223ENST00000472807 SUPT20HQ8NEM7 779 aa11.53□□□□□ -0.56
CHEK2-223ENST00000472807 COL4A5P29400 1685 aa11.52□□□□□ -0.56
CHEK2-223ENST00000472807 ATP5J2-PTCD1G3V325 749 aa11.52□□□□□ -0.57
CHEK2-223ENST00000472807 ABCB7O75027 752 aa11.52□□□□□ -0.57
CHEK2-223ENST00000472807 EPHX2P34913 555 aa11.52□□□□□ -0.57
CHEK2-223ENST00000472807 GRAPQ13588 217 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms