RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 CWC25Q9NXE8 425 aaPredicted RBP25.38■■□□□ 1.65
SF1-213ENST00000472725 NOB1Q9ULX3 412 aaKnown RBP25.38■■□□□ 1.65
SF1-213ENST00000472725 PXDNLA1KZ92 1463 aa25.38■■□□□ 1.65
SF1-213ENST00000472725 IGKV5-2P06315 115 aa25.36■■□□□ 1.65
SF1-213ENST00000472725 HSP90B1P14625 803 aaKnown RBP25.36■■□□□ 1.65
SF1-213ENST00000472725 PDE6BP35913 854 aa25.36■■□□□ 1.65
SF1-213ENST00000472725 TRMT112Q9UI30 125 aaKnown RBP25.36■■□□□ 1.65
SF1-213ENST00000472725 SH3TC1Q8TE82 1336 aa25.36■■□□□ 1.65
SF1-213ENST00000472725 NEURL1BA8MQ27 555 aa25.35■■□□□ 1.65
SF1-213ENST00000472725 F6X3S4 739 aa25.35■■□□□ 1.65
SF1-213ENST00000472725 BCAR3O75815 825 aa25.35■■□□□ 1.65
SF1-213ENST00000472725 ALDH1L1O75891 902 aa25.35■■□□□ 1.65
SF1-213ENST00000472725 SLC10A5Q5PT55 438 aa25.35■■□□□ 1.65
SF1-213ENST00000472725 BEND3Q5T5X7 828 aa25.35■■□□□ 1.65
SF1-213ENST00000472725 RCAN3Q9UKA8 241 aa25.35■■□□□ 1.65
SF1-213ENST00000472725 ANKRD31Q8N7Z5 1873 aa25.34■■□□□ 1.65
SF1-213ENST00000472725 ZBTB38Q8NAP3 1195 aaPredicted RBP25.34■■□□□ 1.65
SF1-213ENST00000472725 FAM177BA6PVY3 158 aa25.33■■□□□ 1.65
SF1-213ENST00000472725 PCCAP05165 728 aaPredicted RBP25.33■■□□□ 1.65
SF1-213ENST00000472725 KLHL34Q8N239 644 aa25.33■■□□□ 1.65
SF1-213ENST00000472725 N4BP2Q86UW6 1770 aaPredicted RBP25.33■■□□□ 1.65
SF1-213ENST00000472725 KLRG2A4D1S0 409 aaPredicted RBP25.32■■□□□ 1.64
SF1-213ENST00000472725 GCKRQ14397 625 aa25.32■■□□□ 1.64
SF1-213ENST00000472725 ERFEQ4G0M1 354 aa25.32■■□□□ 1.64
SF1-213ENST00000472725 ZKSCAN2Q63HK3 967 aa25.32■■□□□ 1.64
SF1-213ENST00000472725 ATF7IPQ6VMQ6 1270 aa25.32■■□□□ 1.64
SF1-213ENST00000472725 SRCIN1Q9C0H9 1055 aa25.32■■□□□ 1.64
SF1-213ENST00000472725 KIAA1551Q9HCM1 1747 aa25.32■■□□□ 1.64
SF1-213ENST00000472725 CWF19L2Q2TBE0 894 aaKnown RBP25.31■■□□□ 1.64
SF1-213ENST00000472725 SLC4A10Q6U841 1118 aa25.31■■□□□ 1.64
SF1-213ENST00000472725 NUTM1Q86Y26 1132 aa25.31■■□□□ 1.64
SF1-213ENST00000472725 CCT4P50991 539 aaKnown RBP25.3■■□□□ 1.64
SF1-213ENST00000472725 CDHR2Q9BYE9 1310 aa25.3■■□□□ 1.64
SF1-213ENST00000472725 LAMB2P55268 1798 aa25.29■■□□□ 1.64
SF1-213ENST00000472725 DLEC1Q9Y238 1755 aa25.29■■□□□ 1.64
SF1-213ENST00000472725 H0YIN7 160 aa25.29■■□□□ 1.64
SF1-213ENST00000472725 FRAT1Q92837 279 aaPredicted RBP25.29■■□□□ 1.64
SF1-213ENST00000472725 NLRP3Q96P20 1036 aa25.29■■□□□ 1.64
SF1-213ENST00000472725 ABCC12Q96J65 1359 aa25.29■■□□□ 1.64
SF1-213ENST00000472725 H7C1W4 665 aa25.28■■□□□ 1.64
SF1-213ENST00000472725 FAM89AQ96GI7 184 aa25.28■■□□□ 1.64
SF1-213ENST00000472725 ABCC4O15439 1325 aa25.28■■□□□ 1.64
SF1-213ENST00000472725 MS4A1P11836 297 aa25.27■■□□□ 1.64
SF1-213ENST00000472725 TRIM27P14373 513 aa25.27■■□□□ 1.64
SF1-213ENST00000472725 CRY2Q49AN0 593 aa25.27■■□□□ 1.64
SF1-213ENST00000472725 NLGN2Q8NFZ4 835 aa25.27■■□□□ 1.64
SF1-213ENST00000472725 DDX60Q8IY21 1712 aaKnown RBP25.26■■□□□ 1.63
SF1-213ENST00000472725 C2CD5Q86YS7 1000 aa25.26■■□□□ 1.63
SF1-213ENST00000472725 CCDC24Q8N4L8 307 aa25.26■■□□□ 1.63
SF1-213ENST00000472725 BRCA1P38398 1863 aaKnown RBP25.26■■□□□ 1.63
SF1-213ENST00000472725 IRS4O14654 1257 aaPredicted RBP25.25■■□□□ 1.63
SF1-213ENST00000472725 SRGNP10124 158 aa25.25■■□□□ 1.63
SF1-213ENST00000472725 DPEP1P16444 411 aa25.25■■□□□ 1.63
SF1-213ENST00000472725 INTS3Q68E01 1043 aaKnown RBP25.25■■□□□ 1.63
SF1-213ENST00000472725 STYK1Q6J9G0 422 aa25.25■■□□□ 1.63
SF1-213ENST00000472725 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.25■■□□□ 1.63
SF1-213ENST00000472725 MASTLQ96GX5 879 aa25.25■■□□□ 1.63
SF1-213ENST00000472725 TNRC6CQ9HCJ0 1690 aaKnown RBP25.24■■□□□ 1.63
SF1-213ENST00000472725 GRM8O00222 908 aa25.24■■□□□ 1.63
SF1-213ENST00000472725 NPR1P16066 1061 aa25.24■■□□□ 1.63
SF1-213ENST00000472725 KCNA3P22001 575 aa25.24■■□□□ 1.63
SF1-213ENST00000472725 C9orf78Q9NZ63 289 aaPredicted RBP25.24■■□□□ 1.63
SF1-213ENST00000472725 PIM2Q9P1W9 311 aa25.24■■□□□ 1.63
SF1-213ENST00000472725 UTYO14607 1347 aa25.23■■□□□ 1.63
SF1-213ENST00000472725 A0A0G2JLW4 131 aa25.23■■□□□ 1.63
SF1-213ENST00000472725 PDE8AO60658 829 aa25.23■■□□□ 1.63
SF1-213ENST00000472725 PLA2G12BQ9BX93 195 aa25.23■■□□□ 1.63
SF1-213ENST00000472725 COL11A2P13942 1736 aaPredicted RBP25.23■■□□□ 1.63
SF1-213ENST00000472725 HOXA10P31260 410 aaPredicted RBP25.22■■□□□ 1.63
SF1-213ENST00000472725 CASP7P55210 303 aa25.22■■□□□ 1.63
SF1-213ENST00000472725 SF3B3Q15393 1217 aaKnown RBP25.22■■□□□ 1.63
SF1-213ENST00000472725 UBE3BQ7Z3V4 1068 aa25.22■■□□□ 1.63
SF1-213ENST00000472725 SYNE4Q8N205 404 aa25.22■■□□□ 1.63
SF1-213ENST00000472725 CNKSR1Q969H4 720 aa25.22■■□□□ 1.63
SF1-213ENST00000472725 MYH3P11055 1940 aa25.22■■□□□ 1.63
SF1-213ENST00000472725 HCLS1P14317 486 aaPredicted RBP25.21■■□□□ 1.63
SF1-213ENST00000472725 CHRNA5P30532 468 aa25.21■■□□□ 1.63
SF1-213ENST00000472725 ALDH1B1P30837 517 aa25.21■■□□□ 1.63
SF1-213ENST00000472725 DZIP1LQ8IYY4 767 aaKnown RBP25.21■■□□□ 1.63
SF1-213ENST00000472725 HDAC5Q9UQL6 1122 aa25.21■■□□□ 1.63
SF1-213ENST00000472725 FTSJ3Q8IY81 847 aaKnown RBP25.2■■□□□ 1.62
SF1-213ENST00000472725 RPGRQ92834 1020 aaKnown RBP25.2■■□□□ 1.62
SF1-213ENST00000472725 RTL5Q5HYW3 569 aaPredicted RBP25.19■■□□□ 1.62
SF1-213ENST00000472725 TTLL6Q8N841 843 aa25.19■■□□□ 1.62
SF1-213ENST00000472725 RBM17Q96I25 401 aaKnown RBP25.19■■□□□ 1.62
SF1-213ENST00000472725 CRAMP1Q96RY5 1269 aa25.19■■□□□ 1.62
SF1-213ENST00000472725 SRCAPQ6ZRS2 3230 aa25.19■■□□□ 1.62
SF1-213ENST00000472725 DALRD3Q5D0E6 543 aaKnown RBP25.18■■□□□ 1.62
SF1-213ENST00000472725 ZNF622Q969S3 477 aaKnown RBP eCLIP25.18■■□□□ 1.628e-25■■□□□ 11.9
SF1-213ENST00000472725 USP44Q9H0E7 712 aa25.18■■□□□ 1.62
SF1-213ENST00000472725 DCAF8L1A6NGE4 600 aa25.17■■□□□ 1.62
SF1-213ENST00000472725 ARFGEF1Q9Y6D6 1849 aa25.16■■□□□ 1.62
SF1-213ENST00000472725 CTSWP56202 376 aa25.16■■□□□ 1.62
SF1-213ENST00000472725 PDE3AQ14432 1141 aa25.16■■□□□ 1.62
SF1-213ENST00000472725 CCDC152Q4G0S7 254 aa25.16■■□□□ 1.62
SF1-213ENST00000472725 CLUAP1Q96AJ1 413 aa25.16■■□□□ 1.62
SF1-213ENST00000472725 C3orf67Q6ZVT6 689 aa25.15■■□□□ 1.62
SF1-213ENST00000472725 DDX46Q7L014 1031 aaKnown RBP25.15■■□□□ 1.62
SF1-213ENST00000472725 JARID2Q92833 1246 aaPredicted RBP25.15■■□□□ 1.62
SF1-213ENST00000472725 RTL9Q8NET4 1388 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms