RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 CCDC87Q9NVE4 849 aa9.15□□□□□ -0.94
CKS1B-204ENST00000471245 ZDHHC3Q9NYG2 299 aa9.15□□□□□ -0.94
CKS1B-204ENST00000471245 LOC100996750A0A140TA64 210 aa9.14□□□□□ -0.95
CKS1B-204ENST00000471245 ZBTB39O15060 712 aa9.14□□□□□ -0.95
CKS1B-204ENST00000471245 IGHA2P01877 340 aa9.14□□□□□ -0.95
CKS1B-204ENST00000471245 USP5P45974 858 aa9.14□□□□□ -0.95
CKS1B-204ENST00000471245 PLA2G4AP47712 749 aa9.14□□□□□ -0.95
CKS1B-204ENST00000471245 NBPF1Q3BBV0 1214 aa9.14□□□□□ -0.95
CKS1B-204ENST00000471245 FAM26DQ5JW98 314 aa9.14□□□□□ -0.95
CKS1B-204ENST00000471245 KRTAP4-6Q9BYQ5 205 aa9.14□□□□□ -0.95
CKS1B-204ENST00000471245 CFTRP13569 1480 aa9.14□□□□□ -0.95
CKS1B-204ENST00000471245 P4HBP07237 508 aaKnown RBP9.13□□□□□ -0.95
CKS1B-204ENST00000471245 MZF1P28698 734 aaPredicted RBP9.13□□□□□ -0.95
CKS1B-204ENST00000471245 TXLNAP40222 546 aa9.13□□□□□ -0.95
CKS1B-204ENST00000471245 FGD1P98174 961 aa9.13□□□□□ -0.95
CKS1B-204ENST00000471245 DSC3Q14574 896 aa9.13□□□□□ -0.95
CKS1B-204ENST00000471245 GJD3Q8N144 294 aa9.13□□□□□ -0.95
CKS1B-204ENST00000471245 CCDC155Q8N6L0 562 aa9.13□□□□□ -0.95
CKS1B-204ENST00000471245 IFT43Q96FT9 208 aa9.13□□□□□ -0.95
CKS1B-204ENST00000471245 KLK14Q9P0G3 267 aa9.13□□□□□ -0.95
CKS1B-204ENST00000471245 F11P03951 625 aa9.12□□□□□ -0.95
CKS1B-204ENST00000471245 RHOQP17081 205 aa9.12□□□□□ -0.95
CKS1B-204ENST00000471245 ZAP70P43403 619 aa9.12□□□□□ -0.95
CKS1B-204ENST00000471245 TMC1Q8TDI8 760 aa9.12□□□□□ -0.95
CKS1B-204ENST00000471245 CHD1O14646 1710 aa9.11□□□□□ -0.95
CKS1B-204ENST00000471245 GPR182O15218 404 aa9.11□□□□□ -0.95
CKS1B-204ENST00000471245 PPFIA3O75145 1194 aa9.11□□□□□ -0.95
CKS1B-204ENST00000471245 LBRQ14739 615 aaKnown RBP9.11□□□□□ -0.95
CKS1B-204ENST00000471245 ATCAYQ86WG3 371 aa9.11□□□□□ -0.95
CKS1B-204ENST00000471245 NANOS1Q8WY41 292 aaKnown RBP9.11□□□□□ -0.95
CKS1B-204ENST00000471245 POLIQ9UNA4 740 aa9.11□□□□□ -0.95
CKS1B-204ENST00000471245 ZNF608Q9ULD9 1512 aaPredicted RBP9.1□□□□□ -0.95
CKS1B-204ENST00000471245 H7C1W4 665 aa9.1□□□□□ -0.95
CKS1B-204ENST00000471245 TERTO14746 1132 aaKnown RBP9.1□□□□□ -0.95
CKS1B-204ENST00000471245 PDGFAP04085 211 aa9.1□□□□□ -0.95
CKS1B-204ENST00000471245 TAGLNQ01995 201 aaKnown RBP9.1□□□□□ -0.95
CKS1B-204ENST00000471245 EHHADHQ08426 723 aa9.1□□□□□ -0.95
CKS1B-204ENST00000471245 IER5Q5VY09 327 aa9.1□□□□□ -0.95
CKS1B-204ENST00000471245 RHPN1Q8TCX5 695 aa9.1□□□□□ -0.95
CKS1B-204ENST00000471245 C7orf43Q8WVR3 580 aa9.1□□□□□ -0.95
CKS1B-204ENST00000471245 FAM13BQ9NYF5 915 aa9.1□□□□□ -0.95
CKS1B-204ENST00000471245 H3BM21 787 aa9.09□□□□□ -0.95
CKS1B-204ENST00000471245 TGFBR3LH3BV60 316 aa9.09□□□□□ -0.95
CKS1B-204ENST00000471245 TATP17735 454 aaPredicted RBP9.09□□□□□ -0.95
CKS1B-204ENST00000471245 ITGA6P23229 1130 aa9.09□□□□□ -0.95
CKS1B-204ENST00000471245 PHKA2P46019 1235 aa9.09□□□□□ -0.95
CKS1B-204ENST00000471245 PLCB3Q01970 1234 aa9.09□□□□□ -0.95
CKS1B-204ENST00000471245 TREML1Q86YW5 311 aa9.09□□□□□ -0.95
CKS1B-204ENST00000471245 EDEM1Q92611 657 aa9.09□□□□□ -0.95
CKS1B-204ENST00000471245 CRISPLD1Q9H336 500 aa9.09□□□□□ -0.95
CKS1B-204ENST00000471245 BCS1LQ9Y276 419 aa9.09□□□□□ -0.95
CKS1B-204ENST00000471245 RPLP1P05386 114 aaKnown RBP9.08□□□□□ -0.96
CKS1B-204ENST00000471245 PCSK2P16519 638 aa9.08□□□□□ -0.96
CKS1B-204ENST00000471245 MSX1P28360 303 aa9.08□□□□□ -0.96
CKS1B-204ENST00000471245 DNM1Q05193 864 aaKnown RBP9.08□□□□□ -0.96
CKS1B-204ENST00000471245 CYB5RLQ6IPT4 315 aa9.08□□□□□ -0.96
CKS1B-204ENST00000471245 TRIM22Q8IYM9 498 aa9.08□□□□□ -0.96
CKS1B-204ENST00000471245 SLC16A10Q8TF71 515 aa9.08□□□□□ -0.96
CKS1B-204ENST00000471245 EIF4G3O43432 1585 aaKnown RBP9.07□□□□□ -0.96
CKS1B-204ENST00000471245 PRPF40AO75400 957 aaKnown RBP9.07□□□□□ -0.96
CKS1B-204ENST00000471245 VSIG8P0DPA2 414 aa9.07□□□□□ -0.96
CKS1B-204ENST00000471245 INSM1Q01101 510 aaPredicted RBP9.07□□□□□ -0.96
CKS1B-204ENST00000471245 ARAP1Q96P48 1450 aa9.07□□□□□ -0.96
CKS1B-204ENST00000471245 MICAL2O94851 1124 aa9.06□□□□□ -0.96
CKS1B-204ENST00000471245 ATP4AP20648 1035 aa9.06□□□□□ -0.96
CKS1B-204ENST00000471245 ITGAEP38570 1179 aa9.06□□□□□ -0.96
CKS1B-204ENST00000471245 AIDAQ96BJ3 306 aa9.06□□□□□ -0.96
CKS1B-204ENST00000471245 SUSD3Q96L08 255 aa9.06□□□□□ -0.96
CKS1B-204ENST00000471245 ANKIB1Q9P2G1 1089 aa9.06□□□□□ -0.96
CKS1B-204ENST00000471245 IFT140Q96RY7 1462 aa9.06□□□□□ -0.96
CKS1B-204ENST00000471245 RECKO95980 971 aa9.05□□□□□ -0.96
CKS1B-204ENST00000471245 LDHBP07195 334 aaKnown RBP9.05□□□□□ -0.96
CKS1B-204ENST00000471245 TCF3P15923 654 aa9.05□□□□□ -0.96
CKS1B-204ENST00000471245 MAPK8P45983 427 aa9.05□□□□□ -0.96
CKS1B-204ENST00000471245 ATP2B2Q01814 1243 aa9.05□□□□□ -0.96
CKS1B-204ENST00000471245 ENOX2Q16206 610 aaKnown RBP9.05□□□□□ -0.96
CKS1B-204ENST00000471245 NLRP8Q86W28 1048 aa9.05□□□□□ -0.96
CKS1B-204ENST00000471245 PGBD3Q8N328 593 aa9.05□□□□□ -0.96
CKS1B-204ENST00000471245 GAS2L1Q99501 681 aaPredicted RBP9.05□□□□□ -0.96
CKS1B-204ENST00000471245 DMGDHQ9UI17 866 aaKnown RBP9.05□□□□□ -0.96
CKS1B-204ENST00000471245 NFX1Q12986 1120 aaKnown RBP9.04□□□□□ -0.96
CKS1B-204ENST00000471245 MRPL58Q14197 206 aaKnown RBP9.04□□□□□ -0.96
CKS1B-204ENST00000471245 DBN1Q16643 649 aa9.04□□□□□ -0.96
CKS1B-204ENST00000471245 GPR152Q8TDT2 470 aa9.04□□□□□ -0.96
CKS1B-204ENST00000471245 NUDT16Q96DE0 195 aaKnown RBP9.04□□□□□ -0.96
CKS1B-204ENST00000471245 WFS1O76024 890 aa9.03□□□□□ -0.96
CKS1B-204ENST00000471245 EFHC2Q5JST6 749 aa9.03□□□□□ -0.96
CKS1B-204ENST00000471245 PIK3R5Q8WYR1 880 aa9.03□□□□□ -0.96
CKS1B-204ENST00000471245 IRF7Q92985 503 aa9.03□□□□□ -0.96
CKS1B-204ENST00000471245 ZIC5Q96T25 663 aa9.03□□□□□ -0.96
CKS1B-204ENST00000471245 NIF3L1Q9GZT8 377 aa9.03□□□□□ -0.96
CKS1B-204ENST00000471245 TOP2AP11388 1531 aaKnown RBP9.03□□□□□ -0.96
CKS1B-204ENST00000471245 NEFLP07196 543 aa9.02□□□□□ -0.97
CKS1B-204ENST00000471245 ARSDP51689 593 aa9.02□□□□□ -0.97
CKS1B-204ENST00000471245 ALG1LQ6GMV1 187 aa9.02□□□□□ -0.97
CKS1B-204ENST00000471245 BICDL1Q6ZP65 573 aa9.02□□□□□ -0.97
CKS1B-204ENST00000471245 RIPOR1Q6ZS17 1223 aa9.02□□□□□ -0.97
CKS1B-204ENST00000471245 SV2AQ7L0J3 742 aa9.02□□□□□ -0.97
CKS1B-204ENST00000471245 TTC16Q8NEE8 873 aa9.02□□□□□ -0.97
CKS1B-204ENST00000471245 FBF1Q8TES7 1133 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms