RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 KLRG2A4D1S0 409 aaPredicted RBP16.02■□□□□ 0.16
SND1-209ENST00000470723 NTSR2O95665 410 aa16.02■□□□□ 0.16
SND1-209ENST00000470723 GCKRQ14397 625 aa16.02■□□□□ 0.16
SND1-209ENST00000470723 PRR5LQ6MZQ0 368 aa16.02■□□□□ 0.16
SND1-209ENST00000470723 NBPF5PQ86XG9 351 aaPredicted RBP16.02■□□□□ 0.16
SND1-209ENST00000470723 ZBTB38Q8NAP3 1195 aaPredicted RBP16.02■□□□□ 0.16
SND1-209ENST00000470723 SRCIN1Q9C0H9 1055 aa16.02■□□□□ 0.16
SND1-209ENST00000470723 CWC25Q9NXE8 425 aaPredicted RBP16.02■□□□□ 0.16
SND1-209ENST00000470723 ANKRD36CQ5JPF3 1778 aa16.02■□□□□ 0.15
SND1-209ENST00000470723 ABCC4O15439 1325 aa16.01■□□□□ 0.15
SND1-209ENST00000470723 PCCAP05165 728 aaPredicted RBP16.01■□□□□ 0.15
SND1-209ENST00000470723 MS4A1P11836 297 aa16.01■□□□□ 0.15
SND1-209ENST00000470723 CCT4P50991 539 aaKnown RBP16.01■□□□□ 0.15
SND1-209ENST00000470723 CWF19L2Q2TBE0 894 aaKnown RBP16.01■□□□□ 0.15
SND1-209ENST00000470723 FRAT1Q92837 279 aaPredicted RBP16.01■□□□□ 0.15
SND1-209ENST00000470723 CD2APQ9Y5K6 639 aa16.01■□□□□ 0.15
SND1-209ENST00000470723 AFDNP55196 1824 aaKnown RBP16.01■□□□□ 0.15
SND1-209ENST00000470723 UTYO14607 1347 aa16■□□□□ 0.15
SND1-209ENST00000470723 PDE3AQ14432 1141 aa16■□□□□ 0.15
SND1-209ENST00000470723 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
SND1-209ENST00000470723 TRMT112Q9UI30 125 aaKnown RBP16■□□□□ 0.15
SND1-209ENST00000470723 PXDNLA1KZ92 1463 aa15.99■□□□□ 0.15
SND1-209ENST00000470723 CASP7P55210 303 aa15.99■□□□□ 0.15
SND1-209ENST00000470723 SLC4A10Q6U841 1118 aa15.99■□□□□ 0.15
SND1-209ENST00000470723 DZIP1LQ8IYY4 767 aaKnown RBP15.99■□□□□ 0.15
SND1-209ENST00000470723 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.99■□□□□ 0.15
SND1-209ENST00000470723 CNBD1Q8NA66 436 aa15.99■□□□□ 0.15
SND1-209ENST00000470723 USP44Q9H0E7 712 aa15.99■□□□□ 0.15
SND1-209ENST00000470723 PDZRN3Q9UPQ7 1066 aa15.99■□□□□ 0.15
SND1-209ENST00000470723 SH3TC1Q8TE82 1336 aa15.98■□□□□ 0.15
SND1-209ENST00000470723 TGFB2P61812 414 aa15.98■□□□□ 0.15
SND1-209ENST00000470723 ERFEQ4G0M1 354 aa15.98■□□□□ 0.15
SND1-209ENST00000470723 FAM89AQ96GI7 184 aa15.98■□□□□ 0.15
SND1-209ENST00000470723 TNNQ9UQP3 1299 aa15.98■□□□□ 0.15
SND1-209ENST00000470723 CDHR2Q9BYE9 1310 aa15.97■□□□□ 0.15
SND1-209ENST00000470723 RIC1Q4ADV7 1423 aa15.97■□□□□ 0.15
SND1-209ENST00000470723 HSP90B1P14625 803 aaKnown RBP15.97■□□□□ 0.15
SND1-209ENST00000470723 SYNE4Q8N205 404 aa15.97■□□□□ 0.15
SND1-209ENST00000470723 ZNF784Q8NCA9 323 aaPredicted RBP15.97■□□□□ 0.15
SND1-209ENST00000470723 PLA2G12BQ9BX93 195 aa15.97■□□□□ 0.15
SND1-209ENST00000470723 KIF13BQ9NQT8 1826 aa15.96■□□□□ 0.15
SND1-209ENST00000470723 GRM8O00222 908 aa15.96■□□□□ 0.15
SND1-209ENST00000470723 PLIN1O60240 522 aa15.96■□□□□ 0.15
SND1-209ENST00000470723 RLBP1P12271 317 aa15.96■□□□□ 0.15
SND1-209ENST00000470723 GTF2E1P29083 439 aaPredicted RBP15.96■□□□□ 0.15
SND1-209ENST00000470723 C1QTNF8P60827 252 aa15.96■□□□□ 0.15
SND1-209ENST00000470723 ST5P78524 1137 aa15.96■□□□□ 0.15
SND1-209ENST00000470723 NUTM1Q86Y26 1132 aa15.96■□□□□ 0.15
SND1-209ENST00000470723 C10orf71Q711Q0 1435 aa15.95■□□□□ 0.14
SND1-209ENST00000470723 FAM177BA6PVY3 158 aa15.95■□□□□ 0.14
SND1-209ENST00000470723 PDE6BP35913 854 aa15.95■□□□□ 0.14
SND1-209ENST00000470723 SF3B3Q15393 1217 aaKnown RBP15.95■□□□□ 0.14
SND1-209ENST00000470723 CRY2Q49AN0 593 aa15.95■□□□□ 0.14
SND1-209ENST00000470723 TMEM57Q8N5G2 664 aa15.95■□□□□ 0.14
SND1-209ENST00000470723 CLUAP1Q96AJ1 413 aa15.95■□□□□ 0.14
SND1-209ENST00000470723 IRS4O14654 1257 aaPredicted RBP15.94■□□□□ 0.14
SND1-209ENST00000470723 ZBTB7BO15156 539 aaPredicted RBP15.94■□□□□ 0.14
SND1-209ENST00000470723 RRP1P56182 461 aaKnown RBP15.94■□□□□ 0.14
SND1-209ENST00000470723 NLRP3Q96P20 1036 aa15.94■□□□□ 0.14
SND1-209ENST00000470723 SYT17Q9BSW7 474 aa15.94■□□□□ 0.14
SND1-209ENST00000470723 C9orf78Q9NZ63 289 aaPredicted RBP15.94■□□□□ 0.14
SND1-209ENST00000470723 N4BP2Q86UW6 1770 aaPredicted RBP15.93■□□□□ 0.14
SND1-209ENST00000470723 PDE8AO60658 829 aa15.93■□□□□ 0.14
SND1-209ENST00000470723 CSF1RP07333 972 aa15.93■□□□□ 0.14
SND1-209ENST00000470723 NBPF7P0C2Y1 421 aaPredicted RBP15.93■□□□□ 0.14
SND1-209ENST00000470723 KCNA3P22001 575 aa15.93■□□□□ 0.14
SND1-209ENST00000470723 HOXA10P31260 410 aaPredicted RBP15.93■□□□□ 0.14
SND1-209ENST00000470723 UBE3BQ7Z3V4 1068 aa15.93■□□□□ 0.14
SND1-209ENST00000470723 CCDC24Q8N4L8 307 aa15.93■□□□□ 0.14
SND1-209ENST00000470723 PANK1Q8TE04 598 aa15.93■□□□□ 0.14
SND1-209ENST00000470723 SRGNP10124 158 aa15.92■□□□□ 0.14
SND1-209ENST00000470723 HCLS1P14317 486 aaPredicted RBP15.92■□□□□ 0.14
SND1-209ENST00000470723 FTSJ3Q8IY81 847 aaKnown RBP15.92■□□□□ 0.14
SND1-209ENST00000470723 JARID2Q92833 1246 aaPredicted RBP15.92■□□□□ 0.14
SND1-209ENST00000470723 KAZALD1Q96I82 304 aa15.92■□□□□ 0.14
SND1-209ENST00000470723 FHDC1Q9C0D6 1143 aaPredicted RBP15.92■□□□□ 0.14
SND1-209ENST00000470723 HDAC5Q9UQL6 1122 aa15.92■□□□□ 0.14
SND1-209ENST00000470723 ANKRD31Q8N7Z5 1873 aa15.91■□□□□ 0.14
SND1-209ENST00000470723 ABCC12Q96J65 1359 aa15.91■□□□□ 0.14
SND1-209ENST00000470723 NPHP1O15259 732 aa15.91■□□□□ 0.14
SND1-209ENST00000470723 FOXO4P98177 505 aa15.91■□□□□ 0.14
SND1-209ENST00000470723 C20orf194Q5TEA3 1177 aa15.91■□□□□ 0.14
SND1-209ENST00000470723 C3orf67Q6ZVT6 689 aa15.91■□□□□ 0.14
SND1-209ENST00000470723 SUPT16HQ9Y5B9 1047 aaKnown RBP15.91■□□□□ 0.14
SND1-209ENST00000470723 H0YIN7 160 aa15.9■□□□□ 0.14
SND1-209ENST00000470723 GNAI3P08754 354 aa15.9■□□□□ 0.14
SND1-209ENST00000470723 MVPQ14764 893 aaKnown RBP15.9■□□□□ 0.14
SND1-209ENST00000470723 RTL5Q5HYW3 569 aaPredicted RBP15.9■□□□□ 0.14
SND1-209ENST00000470723 STYK1Q6J9G0 422 aa15.9■□□□□ 0.14
SND1-209ENST00000470723 TTLL11Q8NHH1 800 aa15.9■□□□□ 0.14
SND1-209ENST00000470723 NPR1P16066 1061 aa15.89■□□□□ 0.13
SND1-209ENST00000470723 DPEP1P16444 411 aa15.89■□□□□ 0.13
SND1-209ENST00000470723 RABL6Q3YEC7 729 aaPredicted RBP15.89■□□□□ 0.13
SND1-209ENST00000470723 C2CD5Q86YS7 1000 aa15.89■□□□□ 0.13
SND1-209ENST00000470723 MASTLQ96GX5 879 aa15.89■□□□□ 0.13
SND1-209ENST00000470723 CRAMP1Q96RY5 1269 aa15.89■□□□□ 0.13
SND1-209ENST00000470723 MEIS3Q99687 375 aa15.89■□□□□ 0.13
SND1-209ENST00000470723 DDX19BQ9UMR2 479 aa15.89■□□□□ 0.13
SND1-209ENST00000470723 DDX60Q8IY21 1712 aaKnown RBP15.88■□□□□ 0.13
SND1-209ENST00000470723 A0A0G2JLW4 131 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms