RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 LAMB4A4D0S4 1761 aa16.28■□□□□ 0.2
UBR4-211ENST00000467272 U2AF1L5P0DN76 240 aaPredicted RBP16.28■□□□□ 0.2
UBR4-211ENST00000467272 U2AF1Q01081 240 aaKnown RBP eCLIP16.28■□□□□ 0.2
UBR4-211ENST00000467272 CST9Q5W186 159 aa16.28■□□□□ 0.2
UBR4-211ENST00000467272 LRP10Q7Z4F1 713 aa16.28■□□□□ 0.2
UBR4-211ENST00000467272 NUTM1Q86Y26 1132 aa16.28■□□□□ 0.2
UBR4-211ENST00000467272 ZNF34Q8IZ26 560 aa16.28■□□□□ 0.2
UBR4-211ENST00000467272 CRAMP1Q96RY5 1269 aa16.28■□□□□ 0.2
UBR4-211ENST00000467272 NYXQ9GZU5 481 aa16.28■□□□□ 0.2
UBR4-211ENST00000467272 MIS18AQ9NYP9 233 aa16.28■□□□□ 0.2
UBR4-211ENST00000467272 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
UBR4-211ENST00000467272 FAM177BA6PVY3 158 aa16.27■□□□□ 0.2
UBR4-211ENST00000467272 EPS15P42566 896 aa16.27■□□□□ 0.2
UBR4-211ENST00000467272 EIF4A1P60842 406 aaKnown RBP16.27■□□□□ 0.2
UBR4-211ENST00000467272 MAP2K1Q02750 393 aaPredicted RBP16.27■□□□□ 0.2
UBR4-211ENST00000467272 FMR1Q06787 632 aaKnown RBP eCLIP16.27■□□□□ 0.26e-7■■□□□ 13.9
UBR4-211ENST00000467272 TTLL7Q6ZT98 887 aa16.27■□□□□ 0.2
UBR4-211ENST00000467272 C3orf67Q6ZVT6 689 aa16.27■□□□□ 0.2
UBR4-211ENST00000467272 JDP2Q8WYK2 163 aa16.27■□□□□ 0.2
UBR4-211ENST00000467272 KDM3BQ7LBC6 1761 aa16.27■□□□□ 0.2
UBR4-211ENST00000467272 NTSR2O95665 410 aa16.26■□□□□ 0.19
UBR4-211ENST00000467272 SUSD4Q5VX71 490 aa16.26■□□□□ 0.19
UBR4-211ENST00000467272 ABHD8Q96I13 439 aa16.26■□□□□ 0.19
UBR4-211ENST00000467272 PLEKHF1Q96S99 279 aa16.26■□□□□ 0.19
UBR4-211ENST00000467272 USP50Q70EL3 339 aaPredicted RBP16.25■□□□□ 0.19
UBR4-211ENST00000467272 PGAP2Q9UHJ9 254 aa16.25■□□□□ 0.19
UBR4-211ENST00000467272 EIF6P56537 245 aaKnown RBP16.24■□□□□ 0.19
UBR4-211ENST00000467272 CNGB1Q14028 1251 aaPredicted RBP16.24■□□□□ 0.19
UBR4-211ENST00000467272 SLC10A5Q5PT55 438 aa16.24■□□□□ 0.19
UBR4-211ENST00000467272 PNISRQ8TF01 805 aaKnown RBP16.24■□□□□ 0.19
UBR4-211ENST00000467272 RTFDC1Q9BY42 306 aaPredicted RBP16.24■□□□□ 0.19
UBR4-211ENST00000467272 VPS33BQ9H267 617 aa16.24■□□□□ 0.19
UBR4-211ENST00000467272 TLL2Q9Y6L7 1015 aa16.24■□□□□ 0.19
UBR4-211ENST00000467272 NUP98P52948 1817 aa16.24■□□□□ 0.19
UBR4-211ENST00000467272 SLC34A2O95436 690 aa16.23■□□□□ 0.19
UBR4-211ENST00000467272 GTF2E1P29083 439 aaPredicted RBP16.23■□□□□ 0.19
UBR4-211ENST00000467272 RGS19P49795 217 aa16.23■□□□□ 0.19
UBR4-211ENST00000467272 PDIA6Q15084 440 aa16.23■□□□□ 0.19
UBR4-211ENST00000467272 GIGYF2Q6Y7W6 1299 aaKnown RBP16.23■□□□□ 0.19
UBR4-211ENST00000467272 CAPNS2Q96L46 248 aa16.23■□□□□ 0.19
UBR4-211ENST00000467272 ERBB4Q15303 1308 aa16.22■□□□□ 0.19
UBR4-211ENST00000467272 TRAF5O00463 557 aa16.22■□□□□ 0.19
UBR4-211ENST00000467272 PPEF1O14829 653 aaPredicted RBP16.22■□□□□ 0.19
UBR4-211ENST00000467272 LARGE2Q8N3Y3 721 aa16.22■□□□□ 0.19
UBR4-211ENST00000467272 GPRC5DQ9NZD1 345 aa16.22■□□□□ 0.19
UBR4-211ENST00000467272 ABT1Q9ULW3 272 aaKnown RBP16.22■□□□□ 0.19
UBR4-211ENST00000467272 GJA3Q9Y6H8 435 aa16.22■□□□□ 0.19
UBR4-211ENST00000467272 RPGRQ92834 1020 aaKnown RBP16.21■□□□□ 0.19
UBR4-211ENST00000467272 RBM17Q96I25 401 aaKnown RBP16.21■□□□□ 0.19
UBR4-211ENST00000467272 GPR101Q96P66 508 aaPredicted RBP16.21■□□□□ 0.19
UBR4-211ENST00000467272 ATP6V0A2Q9Y487 856 aa16.21■□□□□ 0.19
UBR4-211ENST00000467272 TNRC18O15417 2968 aaPredicted RBP16.21■□□□□ 0.19
UBR4-211ENST00000467272 GPTP24298 496 aa16.2■□□□□ 0.18
UBR4-211ENST00000467272 LMOD1P29536 600 aaPredicted RBP16.2■□□□□ 0.18
UBR4-211ENST00000467272 MAP2K2P36507 400 aa16.2■□□□□ 0.18
UBR4-211ENST00000467272 CXCL9Q07325 125 aa16.2■□□□□ 0.18
UBR4-211ENST00000467272 CYP4F22Q6NT55 531 aa16.2■□□□□ 0.18
UBR4-211ENST00000467272 SAPCD2Q86UD0 394 aa16.2■□□□□ 0.18
UBR4-211ENST00000467272 NGEFQ8N5V2 710 aa16.2■□□□□ 0.18
UBR4-211ENST00000467272 HHIPL1Q96JK4 782 aa16.2■□□□□ 0.18
UBR4-211ENST00000467272 ZBTB3Q9H5J0 574 aa16.2■□□□□ 0.18
UBR4-211ENST00000467272 RRP7AQ9Y3A4 280 aaKnown RBP16.2■□□□□ 0.18
UBR4-211ENST00000467272 ECE1P42892 770 aa16.19■□□□□ 0.18
UBR4-211ENST00000467272 PARP10Q53GL7 1025 aa16.19■□□□□ 0.18
UBR4-211ENST00000467272 KIF6Q6ZMV9 814 aa16.19■□□□□ 0.18
UBR4-211ENST00000467272 ADARB2Q9NS39 739 aaKnown RBP16.19■□□□□ 0.18
UBR4-211ENST00000467272 MYL6BP14649 208 aa16.18■□□□□ 0.18
UBR4-211ENST00000467272 HIRAP54198 1017 aaPredicted RBP16.18■□□□□ 0.18
UBR4-211ENST00000467272 NFE2L2Q16236 605 aa16.18■□□□□ 0.18
UBR4-211ENST00000467272 AOC3Q16853 763 aa16.18■□□□□ 0.18
UBR4-211ENST00000467272 NIM1KQ8IY84 436 aa16.18■□□□□ 0.18
UBR4-211ENST00000467272 THUMPD2Q9BTF0 503 aaKnown RBP16.18■□□□□ 0.18
UBR4-211ENST00000467272 ZNRF3Q9ULT6 936 aa16.18■□□□□ 0.18
UBR4-211ENST00000467272 ABCC4O15439 1325 aa16.18■□□□□ 0.18
UBR4-211ENST00000467272 CDHR2Q9BYE9 1310 aa16.18■□□□□ 0.18
UBR4-211ENST00000467272 PPIP5K2O43314 1243 aa16.17■□□□□ 0.18
UBR4-211ENST00000467272 DLG5Q8TDM6 1919 aa16.16■□□□□ 0.18
UBR4-211ENST00000467272 AOC2O75106 756 aa16.16■□□□□ 0.18
UBR4-211ENST00000467272 KIAA2012Q0VF49 1180 aa16.16■□□□□ 0.18
UBR4-211ENST00000467272 PROSER3Q2NL68 480 aa16.16■□□□□ 0.18
UBR4-211ENST00000467272 FAM161AQ3B820 660 aa16.16■□□□□ 0.18
UBR4-211ENST00000467272 PPP1R42Q7Z4L9 355 aa16.16■□□□□ 0.18
UBR4-211ENST00000467272 SP8Q8IXZ3 490 aa16.16■□□□□ 0.18
UBR4-211ENST00000467272 ZC3H15Q8WU90 426 aaKnown RBP16.16■□□□□ 0.18
UBR4-211ENST00000467272 NLRP3Q96P20 1036 aa16.16■□□□□ 0.18
UBR4-211ENST00000467272 DUOX1Q9NRD9 1551 aa16.16■□□□□ 0.18
UBR4-211ENST00000467272 TRPM7Q96QT4 1865 aa16.16■□□□□ 0.18
UBR4-211ENST00000467272 BBOX1O75936 387 aa16.15■□□□□ 0.18
UBR4-211ENST00000467272 GMPSP49915 693 aaPredicted RBP16.15■□□□□ 0.18
UBR4-211ENST00000467272 UTP14AQ9BVJ6 771 aaKnown RBP16.15■□□□□ 0.18
UBR4-211ENST00000467272 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.17
UBR4-211ENST00000467272 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
UBR4-211ENST00000467272 BABAM1Q9NWV8 329 aa16.14■□□□□ 0.17
UBR4-211ENST00000467272 YDJCA8MPS7 323 aa16.13■□□□□ 0.17
UBR4-211ENST00000467272 CA12O43570 354 aa16.13■□□□□ 0.17
UBR4-211ENST00000467272 NLRP10Q86W26 655 aa16.13■□□□□ 0.17
UBR4-211ENST00000467272 SUPT20HQ8NEM7 779 aa16.13■□□□□ 0.17
UBR4-211ENST00000467272 GLIS2Q9BZE0 524 aaPredicted RBP16.13■□□□□ 0.17
UBR4-211ENST00000467272 CELF2O95319 508 aaKnown RBP16.12■□□□□ 0.17
UBR4-211ENST00000467272 TRPM4Q8TD43 1214 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms