RNA–Protein interactions for RNA: ENST00000467259.1

GABBR1-207, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 2

Gene GABBR1, Length 1,252 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-207ENST00000467259 PPP1R42Q7Z4L9 355 aa31.11■■■□□ 2.57
GABBR1-207ENST00000467259 ZNF428Q96B54 188 aa31.11■■■□□ 2.57
GABBR1-207ENST00000467259 RRAGCQ9HB90 399 aa31.11■■■□□ 2.57
GABBR1-207ENST00000467259 LTBP3Q9NS15 1303 aa31.11■■■□□ 2.57
GABBR1-207ENST00000467259 CCDC93Q567U6 631 aa31.1■■■□□ 2.57
GABBR1-207ENST00000467259 SOGA3Q5TF21 947 aa31.1■■■□□ 2.57
GABBR1-207ENST00000467259 UTP14AQ9BVJ6 771 aaKnown RBP31.09■■■□□ 2.57
GABBR1-207ENST00000467259 DBF4Q9UBU7 674 aaPredicted RBP31.09■■■□□ 2.57
GABBR1-207ENST00000467259 RPGRQ92834 1020 aaKnown RBP31.08■■■□□ 2.57
GABBR1-207ENST00000467259 TOMM70O94826 608 aa31.07■■■□□ 2.56
GABBR1-207ENST00000467259 ALDH1B1P30837 517 aa31.07■■■□□ 2.56
GABBR1-207ENST00000467259 HSP90AB3PQ58FF7 597 aa31.07■■■□□ 2.56
GABBR1-207ENST00000467259 SLC51AQ86UW1 340 aa31.07■■■□□ 2.56
GABBR1-207ENST00000467259 NLRP10Q86W26 655 aa31.07■■■□□ 2.56
GABBR1-207ENST00000467259 C8orf58Q8NAV2 365 aa31.07■■■□□ 2.56
GABBR1-207ENST00000467259 DDX60Q8IY21 1712 aaKnown RBP31.07■■■□□ 2.56
GABBR1-207ENST00000467259 TAF1P21675 1872 aa31.06■■■□□ 2.56
GABBR1-207ENST00000467259 GLTPD2A6NH11 291 aa31.06■■■□□ 2.56
GABBR1-207ENST00000467259 TCIRG1Q13488 830 aa31.06■■■□□ 2.56
GABBR1-207ENST00000467259 SYNE4Q8N205 404 aa31.05■■■□□ 2.56
GABBR1-207ENST00000467259 TSR2Q969E8 191 aaKnown RBP31.05■■■□□ 2.56
GABBR1-207ENST00000467259 HSPA6P17066 643 aa31.04■■■□□ 2.56
GABBR1-207ENST00000467259 HYPKQ9NX55 129 aa31.04■■■□□ 2.56
GABBR1-207ENST00000467259 WDR90Q96KV7 1748 aa31.04■■■□□ 2.56
GABBR1-207ENST00000467259 HOXA10P31260 410 aaPredicted RBP31.03■■■□□ 2.56
GABBR1-207ENST00000467259 C16orf71Q8IYS4 520 aaPredicted RBP31.03■■■□□ 2.56
GABBR1-207ENST00000467259 PLBD2Q8NHP8 589 aa31.03■■■□□ 2.56
GABBR1-207ENST00000467259 ZNF277Q9NRM2 450 aaPredicted RBP31.03■■■□□ 2.56
GABBR1-207ENST00000467259 SNED1Q8TER0 1413 aa31.03■■■□□ 2.56
GABBR1-207ENST00000467259 FKBP4Q02790 459 aaKnown RBP eCLIP31.02■■■□□ 2.56
GABBR1-207ENST00000467259 ANKRD13DQ6ZTN6 518 aa31.02■■■□□ 2.56
GABBR1-207ENST00000467259 WWC1Q8IX03 1113 aa31.02■■■□□ 2.56
GABBR1-207ENST00000467259 TCERG1O14776 1098 aaKnown RBP31.01■■■□□ 2.55
GABBR1-207ENST00000467259 HCLS1P14317 486 aaPredicted RBP31.01■■■□□ 2.55
GABBR1-207ENST00000467259 PHAXQ9H814 394 aaKnown RBP31.01■■■□□ 2.55
GABBR1-207ENST00000467259 TRMT112Q9UI30 125 aaKnown RBP31.01■■■□□ 2.55
GABBR1-207ENST00000467259 ATP5J2-PTCD1G3V325 749 aa31■■■□□ 2.55
GABBR1-207ENST00000467259 CCDC27Q2M243 656 aa31■■■□□ 2.55
GABBR1-207ENST00000467259 TSPYL6Q8N831 410 aa31■■■□□ 2.55
GABBR1-207ENST00000467259 RBM17Q96I25 401 aaKnown RBP31■■■□□ 2.55
GABBR1-207ENST00000467259 NLRP3Q96P20 1036 aa31■■■□□ 2.55
GABBR1-207ENST00000467259 SLC10A5Q5PT55 438 aa30.99■■■□□ 2.55
GABBR1-207ENST00000467259 RTKN2Q8IZC4 609 aa30.99■■■□□ 2.55
GABBR1-207ENST00000467259 SALL2Q9Y467 1007 aaPredicted RBP30.99■■■□□ 2.55
GABBR1-207ENST00000467259 RNF123Q5XPI4 1314 aa30.98■■■□□ 2.55
GABBR1-207ENST00000467259 RBM46Q8TBY0 533 aaKnown RBP30.98■■■□□ 2.55
GABBR1-207ENST00000467259 CRAMP1Q96RY5 1269 aa30.98■■■□□ 2.55
GABBR1-207ENST00000467259 PPEF1O14829 653 aaPredicted RBP30.97■■■□□ 2.55
GABBR1-207ENST00000467259 ISCA1Q9BUE6 129 aa30.97■■■□□ 2.55
GABBR1-207ENST00000467259 SH3TC1Q8TE82 1336 aa30.97■■■□□ 2.55
GABBR1-207ENST00000467259 DPY19L2Q6NUT2 758 aa30.96■■■□□ 2.55
GABBR1-207ENST00000467259 ABCC4O15439 1325 aa30.96■■■□□ 2.55
GABBR1-207ENST00000467259 COL4A5P29400 1685 aa30.95■■■□□ 2.55
GABBR1-207ENST00000467259 POTECB2RU33 542 aa30.95■■■□□ 2.55
GABBR1-207ENST00000467259 DDNO94850 711 aaPredicted RBP30.94■■■□□ 2.54
GABBR1-207ENST00000467259 VEGFAP15692 232 aaPredicted RBP30.94■■■□□ 2.54
GABBR1-207ENST00000467259 GOLGA2Q08379 1002 aa30.94■■■□□ 2.54
GABBR1-207ENST00000467259 IARSP41252 1262 aaKnown RBP30.93■■■□□ 2.54
GABBR1-207ENST00000467259 RIC3Q7Z5B4 369 aa30.93■■■□□ 2.54
GABBR1-207ENST00000467259 ZNF541Q9H0D2 1346 aa30.93■■■□□ 2.54
GABBR1-207ENST00000467259 RTL5Q5HYW3 569 aaPredicted RBP30.92■■■□□ 2.54
GABBR1-207ENST00000467259 FAM9BQ8IZU0 186 aa30.92■■■□□ 2.54
GABBR1-207ENST00000467259 FAM89AQ96GI7 184 aa30.92■■■□□ 2.54
GABBR1-207ENST00000467259 CCDC30Q5VVM6 783 aa30.91■■■□□ 2.54
GABBR1-207ENST00000467259 PSMD1Q99460 953 aa30.91■■■□□ 2.54
GABBR1-207ENST00000467259 COL4A1P02462 1669 aa30.9■■■□□ 2.54
GABBR1-207ENST00000467259 CC2D2BQ6DHV5 1058 aa30.9■■■□□ 2.54
GABBR1-207ENST00000467259 IL16Q14005 1332 aa30.9■■■□□ 2.54
GABBR1-207ENST00000467259 SCN4AP35499 1836 aa30.89■■■□□ 2.54
GABBR1-207ENST00000467259 MYD88Q99836 296 aa30.89■■■□□ 2.54
GABBR1-207ENST00000467259 FANCIQ9NVI1 1328 aa30.88■■■□□ 2.53
GABBR1-207ENST00000467259 FSTL1Q12841 308 aa30.87■■■□□ 2.53
GABBR1-207ENST00000467259 TWISTNBQ3B726 338 aaPredicted RBP30.87■■■□□ 2.53
GABBR1-207ENST00000467259 LRRC37AA6NMS7 1700 aa30.87■■■□□ 2.53
GABBR1-207ENST00000467259 NCBP3Q53F19 620 aaKnown RBP30.86■■■□□ 2.53
GABBR1-207ENST00000467259 DDX46Q7L014 1031 aaKnown RBP30.86■■■□□ 2.53
GABBR1-207ENST00000467259 SMC1BQ8NDV3 1235 aa30.86■■■□□ 2.53
GABBR1-207ENST00000467259 ATP6V0A2Q9Y487 856 aa30.86■■■□□ 2.53
GABBR1-207ENST00000467259 CACNA1FO60840 1977 aa30.85■■■□□ 2.53
GABBR1-207ENST00000467259 APLP1P51693 650 aa30.85■■■□□ 2.53
GABBR1-207ENST00000467259 TRIM28Q13263 835 aaKnown RBP30.85■■■□□ 2.53
GABBR1-207ENST00000467259 HTRA3P83110 453 aa30.83■■■□□ 2.53
GABBR1-207ENST00000467259 GRAPQ13588 217 aa30.83■■■□□ 2.53
GABBR1-207ENST00000467259 GRAPLQ8TC17 118 aaPredicted RBP30.83■■■□□ 2.53
GABBR1-207ENST00000467259 FZD9O00144 591 aa30.82■■■□□ 2.52
GABBR1-207ENST00000467259 IRS4O14654 1257 aaPredicted RBP30.82■■■□□ 2.52
GABBR1-207ENST00000467259 POTEIP0CG38 1075 aa30.82■■■□□ 2.52
GABBR1-207ENST00000467259 POTEJP0CG39 1038 aa30.82■■■□□ 2.52
GABBR1-207ENST00000467259 G2E3Q7L622 706 aa30.82■■■□□ 2.52
GABBR1-207ENST00000467259 JARID2Q92833 1246 aaPredicted RBP30.82■■■□□ 2.52
GABBR1-207ENST00000467259 STK31Q9BXU1 1019 aa30.82■■■□□ 2.52
GABBR1-207ENST00000467259 MAP3K2Q9Y2U5 619 aa30.82■■■□□ 2.52
GABBR1-207ENST00000467259 DDX58O95786 925 aaKnown RBP30.81■■■□□ 2.52
GABBR1-207ENST00000467259 WDR63Q8IWG1 891 aa30.81■■■□□ 2.52
GABBR1-207ENST00000467259 LARGE2Q8N3Y3 721 aa30.81■■■□□ 2.52
GABBR1-207ENST00000467259 JDP2Q8WYK2 163 aa30.81■■■□□ 2.52
GABBR1-207ENST00000467259 METTL22Q9BUU2 404 aaPredicted RBP30.81■■■□□ 2.52
GABBR1-207ENST00000467259 CHMP4AQ9BY43 222 aa30.81■■■□□ 2.52
GABBR1-207ENST00000467259 TMX4Q9H1E5 349 aaPredicted RBP30.81■■■□□ 2.52
GABBR1-207ENST00000467259 SPINK5Q9NQ38 1064 aaPredicted RBP30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms