RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 MEIS3Q99687 375 aa13.52□□□□□ -0.25
NUP188-204ENST00000467044 USP44Q9H0E7 712 aa13.52□□□□□ -0.25
NUP188-204ENST00000467044 QSER1Q2KHR3 1735 aa13.52□□□□□ -0.25
NUP188-204ENST00000467044 UBN2Q6ZU65 1347 aa13.51□□□□□ -0.25
NUP188-204ENST00000467044 GRM8O00222 908 aa13.51□□□□□ -0.25
NUP188-204ENST00000467044 GNAI3P08754 354 aa13.51□□□□□ -0.25
NUP188-204ENST00000467044 UBTFL1P0CB47 393 aaPredicted RBP13.51□□□□□ -0.25
NUP188-204ENST00000467044 R3HDM1Q15032 1099 aaKnown RBP13.51□□□□□ -0.25
NUP188-204ENST00000467044 SUSD4Q5VX71 490 aa13.51□□□□□ -0.25
NUP188-204ENST00000467044 MSL1Q68DK7 614 aa13.51□□□□□ -0.25
NUP188-204ENST00000467044 PPP1R42Q7Z4L9 355 aa13.51□□□□□ -0.25
NUP188-204ENST00000467044 NLGN1Q8N2Q7 840 aa13.51□□□□□ -0.25
NUP188-204ENST00000467044 PDGFDQ9GZP0 370 aaPredicted RBP13.51□□□□□ -0.25
NUP188-204ENST00000467044 TRMT112Q9UI30 125 aaKnown RBP13.51□□□□□ -0.25
NUP188-204ENST00000467044 PSDA5PKW4 1024 aaPredicted RBP13.5□□□□□ -0.25
NUP188-204ENST00000467044 NPHP1O15259 732 aa13.5□□□□□ -0.25
NUP188-204ENST00000467044 NBPF7P0C2Y1 421 aaPredicted RBP13.5□□□□□ -0.25
NUP188-204ENST00000467044 GTF2E1P29083 439 aaPredicted RBP13.5□□□□□ -0.25
NUP188-204ENST00000467044 NFIXQ14938 502 aa13.5□□□□□ -0.25
NUP188-204ENST00000467044 UBE3BQ7Z3V4 1068 aa13.5□□□□□ -0.25
NUP188-204ENST00000467044 UTP14AQ9BVJ6 771 aaKnown RBP13.5□□□□□ -0.25
NUP188-204ENST00000467044 C1orf115Q9H7X2 142 aa13.5□□□□□ -0.25
NUP188-204ENST00000467044 H7C1W4 665 aa13.49□□□□□ -0.25
NUP188-204ENST00000467044 NBPF5PQ86XG9 351 aaPredicted RBP13.49□□□□□ -0.25
NUP188-204ENST00000467044 FAM89AQ96GI7 184 aa13.49□□□□□ -0.25
NUP188-204ENST00000467044 ZBTB40Q9NUA8 1239 aa13.49□□□□□ -0.25
NUP188-204ENST00000467044 GNAI2P04899 355 aa13.48□□□□□ -0.25
NUP188-204ENST00000467044 PCCAP05165 728 aaPredicted RBP13.48□□□□□ -0.25
NUP188-204ENST00000467044 TM4SF1P30408 202 aa13.48□□□□□ -0.25
NUP188-204ENST00000467044 ZBTB38Q8NAP3 1195 aaPredicted RBP13.48□□□□□ -0.25
NUP188-204ENST00000467044 SLC16A10Q8TF71 515 aa13.48□□□□□ -0.25
NUP188-204ENST00000467044 NYXQ9GZU5 481 aa13.48□□□□□ -0.25
NUP188-204ENST00000467044 HDAC5Q9UQL6 1122 aa13.48□□□□□ -0.25
NUP188-204ENST00000467044 GTF3C3Q9Y5Q9 886 aa13.48□□□□□ -0.25
NUP188-204ENST00000467044 CARMIL3Q8ND23 1372 aa13.47□□□□□ -0.25
NUP188-204ENST00000467044 UTYO14607 1347 aa13.47□□□□□ -0.25
NUP188-204ENST00000467044 SH3TC1Q8TE82 1336 aa13.47□□□□□ -0.25
NUP188-204ENST00000467044 NTSR2O95665 410 aa13.47□□□□□ -0.25
NUP188-204ENST00000467044 SERPINB2P05120 415 aa13.47□□□□□ -0.25
NUP188-204ENST00000467044 AAMPQ13685 434 aa13.47□□□□□ -0.25
NUP188-204ENST00000467044 TPTE2Q6XPS3 522 aa13.47□□□□□ -0.25
NUP188-204ENST00000467044 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
NUP188-204ENST00000467044 SYNE4Q8N205 404 aa13.47□□□□□ -0.25
NUP188-204ENST00000467044 SUCLG2Q96I99 432 aa13.47□□□□□ -0.25
NUP188-204ENST00000467044 LRRFIP2Q9Y608 721 aaKnown RBP13.47□□□□□ -0.25
NUP188-204ENST00000467044 PARP3Q9Y6F1 533 aa13.47□□□□□ -0.25
NUP188-204ENST00000467044 IRS4O14654 1257 aaPredicted RBP13.46□□□□□ -0.25
NUP188-204ENST00000467044 ZBTB7AO95365 584 aa13.46□□□□□ -0.25
NUP188-204ENST00000467044 MMP10P09238 476 aa13.46□□□□□ -0.25
NUP188-204ENST00000467044 CASP7P55210 303 aa13.46□□□□□ -0.25
NUP188-204ENST00000467044 ERFEQ4G0M1 354 aa13.46□□□□□ -0.25
NUP188-204ENST00000467044 ERICH6BQ5W0A0 696 aa13.46□□□□□ -0.25
NUP188-204ENST00000467044 CCDC24Q8N4L8 307 aa13.46□□□□□ -0.25
NUP188-204ENST00000467044 IBTKQ9P2D0 1353 aaPredicted RBP13.45□□□□□ -0.26
NUP188-204ENST00000467044 POLRMTO00411 1230 aaKnown RBP13.45□□□□□ -0.26
NUP188-204ENST00000467044 HCLS1P14317 486 aaPredicted RBP13.45□□□□□ -0.26
NUP188-204ENST00000467044 DDR1Q08345 913 aa13.45□□□□□ -0.26
NUP188-204ENST00000467044 CNBD1Q8NA66 436 aa13.45□□□□□ -0.26
NUP188-204ENST00000467044 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
NUP188-204ENST00000467044 CDHR2Q9BYE9 1310 aa13.44□□□□□ -0.26
NUP188-204ENST00000467044 EPHA10Q5JZY3 1008 aa13.44□□□□□ -0.26
NUP188-204ENST00000467044 BICC1Q9H694 974 aaKnown RBP13.44□□□□□ -0.26
NUP188-204ENST00000467044 PCDHB15Q9Y5E8 787 aa13.44□□□□□ -0.26
NUP188-204ENST00000467044 COL24A1Q17RW2 1714 aa13.44□□□□□ -0.26
NUP188-204ENST00000467044 SOCS7O14512 581 aa13.43□□□□□ -0.26
NUP188-204ENST00000467044 PDE8AO60658 829 aa13.43□□□□□ -0.26
NUP188-204ENST00000467044 HSP90B1P14625 803 aaKnown RBP13.43□□□□□ -0.26
NUP188-204ENST00000467044 ST5P78524 1137 aa13.43□□□□□ -0.26
NUP188-204ENST00000467044 PRR5LQ6MZQ0 368 aa13.43□□□□□ -0.26
NUP188-204ENST00000467044 KAZALD1Q96I82 304 aa13.43□□□□□ -0.26
NUP188-204ENST00000467044 PPP4R2Q9NY27 417 aa13.43□□□□□ -0.26
NUP188-204ENST00000467044 CHMP3Q9Y3E7 222 aa13.43□□□□□ -0.26
NUP188-204ENST00000467044 FOXO4P98177 505 aa13.42□□□□□ -0.26
NUP188-204ENST00000467044 ATP8B2P98198 1209 aa13.42□□□□□ -0.26
NUP188-204ENST00000467044 CEP85Q6P2H3 762 aa13.42□□□□□ -0.26
NUP188-204ENST00000467044 LMBR1LQ6UX01 489 aa13.42□□□□□ -0.26
NUP188-204ENST00000467044 RPAP2Q8IXW5 612 aaPredicted RBP13.42□□□□□ -0.26
NUP188-204ENST00000467044 CCDC85AQ96PX6 553 aaPredicted RBP13.42□□□□□ -0.26
NUP188-204ENST00000467044 MTFR1LQ9H019 292 aa13.42□□□□□ -0.26
NUP188-204ENST00000467044 CASZ1Q86V15 1759 aa13.42□□□□□ -0.26
NUP188-204ENST00000467044 POLD1P28340 1107 aa13.41□□□□□ -0.26
NUP188-204ENST00000467044 SLC10A5Q5PT55 438 aa13.41□□□□□ -0.26
NUP188-204ENST00000467044 ANKRD44Q8N8A2 993 aa13.41□□□□□ -0.26
NUP188-204ENST00000467044 CCDC136Q96JN2 1154 aa13.41□□□□□ -0.26
NUP188-204ENST00000467044 NLRP3Q96P20 1036 aa13.41□□□□□ -0.26
NUP188-204ENST00000467044 PLA2G12BQ9BX93 195 aa13.41□□□□□ -0.26
NUP188-204ENST00000467044 ABCC12Q96J65 1359 aa13.41□□□□□ -0.26
NUP188-204ENST00000467044 DDX60Q8IY21 1712 aaKnown RBP13.4□□□□□ -0.26
NUP188-204ENST00000467044 SRGAP3O43295 1099 aa13.4□□□□□ -0.26
NUP188-204ENST00000467044 HMMRO75330 724 aa13.4□□□□□ -0.26
NUP188-204ENST00000467044 CTSWP56202 376 aa13.4□□□□□ -0.26
NUP188-204ENST00000467044 B4GALNT3Q6L9W6 998 aa13.4□□□□□ -0.26
NUP188-204ENST00000467044 MYH3P11055 1940 aa13.4□□□□□ -0.26
NUP188-204ENST00000467044 PNMA6EA0A0J9YXQ4 647 aa13.39□□□□□ -0.27
NUP188-204ENST00000467044 RABL6Q3YEC7 729 aaPredicted RBP13.39□□□□□ -0.27
NUP188-204ENST00000467044 SIRT2Q8IXJ6 389 aa13.39□□□□□ -0.27
NUP188-204ENST00000467044 TTLL11Q8NHH1 800 aa13.39□□□□□ -0.27
NUP188-204ENST00000467044 RWDD1Q9H446 243 aaPredicted RBP13.39□□□□□ -0.27
NUP188-204ENST00000467044 CSF1RP07333 972 aa13.38□□□□□ -0.27
NUP188-204ENST00000467044 CCDC57Q2TAC2 916 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms