RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 OTUD5Q96G74 571 aa17.56■□□□□ 0.4
UBR4-210ENST00000466969 KIF20BQ96Q89 1820 aa17.56■□□□□ 0.4
UBR4-210ENST00000466969 SCN7AQ01118 1682 aa17.55■□□□□ 0.4
UBR4-210ENST00000466969 CEP290O15078 2479 aa17.55■□□□□ 0.4
UBR4-210ENST00000466969 SLC39A6Q13433 755 aa17.55■□□□□ 0.4
UBR4-210ENST00000466969 EIF4A2Q14240 407 aaKnown RBP17.55■□□□□ 0.4
UBR4-210ENST00000466969 CC2D2BQ6DHV5 1058 aa17.55■□□□□ 0.4
UBR4-210ENST00000466969 KLRG2A4D1S0 409 aaPredicted RBP17.54■□□□□ 0.4
UBR4-210ENST00000466969 GMPSP49915 693 aaPredicted RBP17.54■□□□□ 0.4
UBR4-210ENST00000466969 CHRDL2Q6WN34 429 aa17.54■□□□□ 0.4
UBR4-210ENST00000466969 GPR25O00155 361 aa17.53■□□□□ 0.4
UBR4-210ENST00000466969 HIRAP54198 1017 aaPredicted RBP17.53■□□□□ 0.4
UBR4-210ENST00000466969 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
UBR4-210ENST00000466969 SLC52A2Q9HAB3 445 aa17.53■□□□□ 0.4
UBR4-210ENST00000466969 KIAA0100Q14667 2235 aaKnown RBP17.53■□□□□ 0.4
UBR4-210ENST00000466969 H0YGN5 161 aa17.52■□□□□ 0.4
UBR4-210ENST00000466969 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.4
UBR4-210ENST00000466969 CDHR2Q9BYE9 1310 aa17.51■□□□□ 0.39
UBR4-210ENST00000466969 EN2P19622 333 aaPredicted RBP17.51■□□□□ 0.39
UBR4-210ENST00000466969 NOM1Q5C9Z4 860 aaKnown RBP17.51■□□□□ 0.39
UBR4-210ENST00000466969 DLK2Q6UY11 383 aa17.51■□□□□ 0.39
UBR4-210ENST00000466969 TRPM4Q8TD43 1214 aa17.51■□□□□ 0.39
UBR4-210ENST00000466969 SNED1Q8TER0 1413 aa17.51■□□□□ 0.39
UBR4-210ENST00000466969 NPC1L1Q9UHC9 1359 aa17.51■□□□□ 0.39
UBR4-210ENST00000466969 BRCA2P51587 3418 aa17.5■□□□□ 0.39
UBR4-210ENST00000466969 PPIP5K2O43314 1243 aa17.5■□□□□ 0.39
UBR4-210ENST00000466969 FKTNO75072 461 aa17.5■□□□□ 0.39
UBR4-210ENST00000466969 KRT26Q7Z3Y9 468 aa17.5■□□□□ 0.39
UBR4-210ENST00000466969 CENPFP49454 3210 aa17.5■□□□□ 0.39
UBR4-210ENST00000466969 PAPPA2Q9BXP8 1791 aa17.5■□□□□ 0.39
UBR4-210ENST00000466969 SLC24A1O60721 1099 aa17.49■□□□□ 0.39
UBR4-210ENST00000466969 CAMTA2O94983 1202 aa17.49■□□□□ 0.39
UBR4-210ENST00000466969 CXCL9Q07325 125 aa17.49■□□□□ 0.39
UBR4-210ENST00000466969 TPTE2Q6XPS3 522 aa17.49■□□□□ 0.39
UBR4-210ENST00000466969 RBM27Q9P2N5 1060 aaKnown RBP17.49■□□□□ 0.39
UBR4-210ENST00000466969 H7C1D1 291 aa17.48■□□□□ 0.39
UBR4-210ENST00000466969 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
UBR4-210ENST00000466969 RASAL3Q86YV0 1011 aa17.48■□□□□ 0.39
UBR4-210ENST00000466969 COL25A1Q9BXS0 654 aaPredicted RBP17.48■□□□□ 0.39
UBR4-210ENST00000466969 RBBP6Q7Z6E9 1792 aaKnown RBP17.48■□□□□ 0.39
UBR4-210ENST00000466969 RANBP2P49792 3224 aaKnown RBP17.47■□□□□ 0.39
UBR4-210ENST00000466969 POLKQ9UBT6 870 aa17.47■□□□□ 0.39
UBR4-210ENST00000466969 ZNRF3Q9ULT6 936 aa17.47■□□□□ 0.39
UBR4-210ENST00000466969 AOC3Q16853 763 aa17.46■□□□□ 0.39
UBR4-210ENST00000466969 DCPSQ96C86 337 aaKnown RBP17.46■□□□□ 0.39
UBR4-210ENST00000466969 TMEM106CQ9BVX2 250 aa17.46■□□□□ 0.39
UBR4-210ENST00000466969 CNOT7Q9UIV1 285 aaKnown RBP17.46■□□□□ 0.39
UBR4-210ENST00000466969 TRIM17Q9Y577 477 aa17.46■□□□□ 0.39
UBR4-210ENST00000466969 HTTP42858 3142 aa17.46■□□□□ 0.39
UBR4-210ENST00000466969 GTF2E1P29083 439 aaPredicted RBP17.44■□□□□ 0.38
UBR4-210ENST00000466969 TNIP1Q15025 636 aa17.44■□□□□ 0.38
UBR4-210ENST00000466969 DZIP3Q86Y13 1208 aaKnown RBP17.44■□□□□ 0.38
UBR4-210ENST00000466969 TTC5Q8N0Z6 440 aa17.44■□□□□ 0.38
UBR4-210ENST00000466969 VPS33BQ9H267 617 aa17.44■□□□□ 0.38
UBR4-210ENST00000466969 ZNF652Q9Y2D9 606 aa17.44■□□□□ 0.38
UBR4-210ENST00000466969 ADM5C9JUS6 153 aa17.43■□□□□ 0.38
UBR4-210ENST00000466969 CLEC4GQ6UXB4 293 aa17.43■□□□□ 0.38
UBR4-210ENST00000466969 TESK2Q96S53 571 aa17.43■□□□□ 0.38
UBR4-210ENST00000466969 TEX13AQ9BXU3 409 aaPredicted RBP17.43■□□□□ 0.38
UBR4-210ENST00000466969 LGR6Q9HBX8 967 aa17.43■□□□□ 0.38
UBR4-210ENST00000466969 UNC80Q8N2C7 3258 aa17.42■□□□□ 0.38
UBR4-210ENST00000466969 FAM177BA6PVY3 158 aa17.42■□□□□ 0.38
UBR4-210ENST00000466969 TNNT2P45379 298 aaPredicted RBP17.42■□□□□ 0.38
UBR4-210ENST00000466969 TMX4Q9H1E5 349 aaPredicted RBP17.42■□□□□ 0.38
UBR4-210ENST00000466969 MICALL2Q8IY33 904 aa17.41■□□□□ 0.38
UBR4-210ENST00000466969 SHTN1A0MZ66 631 aa17.4■□□□□ 0.38
UBR4-210ENST00000466969 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
UBR4-210ENST00000466969 RAD17O75943 681 aa17.4■□□□□ 0.38
UBR4-210ENST00000466969 OTOP1Q7RTM1 612 aa17.4■□□□□ 0.38
UBR4-210ENST00000466969 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
UBR4-210ENST00000466969 NIP7Q9Y221 180 aaKnown RBP eCLIP17.4■□□□□ 0.38
UBR4-210ENST00000466969 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.37
UBR4-210ENST00000466969 TM4SF4P48230 202 aa17.39■□□□□ 0.37
UBR4-210ENST00000466969 SAMD7Q7Z3H4 446 aa17.39■□□□□ 0.37
UBR4-210ENST00000466969 AEBP1Q8IUX7 1158 aa17.39■□□□□ 0.37
UBR4-210ENST00000466969 SULF1Q8IWU6 871 aa17.39■□□□□ 0.37
UBR4-210ENST00000466969 POLR2AP24928 1970 aaKnown RBP17.39■□□□□ 0.37
UBR4-210ENST00000466969 MRC1P22897 1456 aa17.38■□□□□ 0.37
UBR4-210ENST00000466969 PPEF1O14829 653 aaPredicted RBP17.38■□□□□ 0.37
UBR4-210ENST00000466969 CRY2Q49AN0 593 aa17.38■□□□□ 0.37
UBR4-210ENST00000466969 TBC1D10BQ4KMP7 808 aaPredicted RBP17.38■□□□□ 0.37
UBR4-210ENST00000466969 SUPT20HQ8NEM7 779 aa17.38■□□□□ 0.37
UBR4-210ENST00000466969 ARMC5Q96C12 935 aa17.38■□□□□ 0.37
UBR4-210ENST00000466969 A1BGP04217 495 aa17.37■□□□□ 0.37
UBR4-210ENST00000466969 FKBP1BP68106 108 aa17.37■□□□□ 0.37
UBR4-210ENST00000466969 SREBF2Q12772 1141 aa17.37■□□□□ 0.37
UBR4-210ENST00000466969 CFHR5Q9BXR6 569 aa17.37■□□□□ 0.37
UBR4-210ENST00000466969 PRDM6Q9NQX0 595 aa17.37■□□□□ 0.37
UBR4-210ENST00000466969 PTPN22Q9Y2R2 807 aa17.37■□□□□ 0.37
UBR4-210ENST00000466969 NEUROD1Q13562 356 aa17.36■□□□□ 0.37
UBR4-210ENST00000466969 ANKRD13DQ6ZTN6 518 aa17.36■□□□□ 0.37
UBR4-210ENST00000466969 DPF3Q92784 378 aa17.36■□□□□ 0.37
UBR4-210ENST00000466969 CDCA5Q96FF9 252 aa17.36■□□□□ 0.37
UBR4-210ENST00000466969 RBM26Q5T8P6 1007 aaKnown RBP17.35■□□□□ 0.37
UBR4-210ENST00000466969 SULT6B1Q6IMI4 303 aa17.35■□□□□ 0.37
UBR4-210ENST00000466969 CARD14Q9BXL6 1004 aa17.35■□□□□ 0.37
UBR4-210ENST00000466969 HEG1Q9ULI3 1381 aa17.35■□□□□ 0.37
UBR4-210ENST00000466969 UBR2Q8IWV8 1755 aa17.35■□□□□ 0.37
UBR4-210ENST00000466969 SLC4A8Q2Y0W8 1093 aa17.34■□□□□ 0.37
UBR4-210ENST00000466969 DPF2Q92785 391 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms