RNA–Protein interactions for RNA: ENST00000466707.1

ABCA2-213, Transcript of ATP binding cassette subfamily A member 2, human

TSL 2

Gene ABCA2, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-213	ENST00000466707	IARS	P41252	1262 aa	Known RBP	33.38	■■■□□ 2.93
ABCA2-213	ENST00000466707	C3orf67	Q6ZVT6	689 aa		33.38	■■■□□ 2.93
ABCA2-213	ENST00000466707	SYNE4	Q8N205	404 aa		33.38	■■■□□ 2.93
ABCA2-213	ENST00000466707	HOXA10	P31260	410 aa	Predicted RBP	33.37	■■■□□ 2.93
ABCA2-213	ENST00000466707	BABAM1	Q9NWV8	329 aa		33.37	■■■□□ 2.93
ABCA2-213	ENST00000466707	LMOD3	Q0VAK6	560 aa		33.36	■■■□□ 2.93
ABCA2-213	ENST00000466707	RPGR	Q92834	1020 aa	Known RBP	33.36	■■■□□ 2.93
ABCA2-213	ENST00000466707	LAMB2	P55268	1798 aa		33.36	■■■□□ 2.93
ABCA2-213	ENST00000466707	ADAMTSL1	Q8N6G6	1762 aa		33.35	■■■□□ 2.93
ABCA2-213	ENST00000466707	NEUROD2	Q15784	382 aa		33.35	■■■□□ 2.93
ABCA2-213	ENST00000466707	TAF1D	Q9H5J8	278 aa	Predicted RBP	33.35	■■■□□ 2.93
ABCA2-213	ENST00000466707	IQCA1L	A6NCM1	817 aa		33.34	■■■□□ 2.93
ABCA2-213	ENST00000466707	KRT24	Q2M2I5	525 aa		33.34	■■■□□ 2.93
ABCA2-213	ENST00000466707	NECTIN2	Q92692	538 aa		33.34	■■■□□ 2.93
ABCA2-213	ENST00000466707	PSMD1	Q99460	953 aa		33.34	■■■□□ 2.93
ABCA2-213	ENST00000466707	FZD9	O00144	591 aa		33.32	■■■□□ 2.92
ABCA2-213	ENST00000466707	PARP10	Q53GL7	1025 aa		33.32	■■■□□ 2.92
ABCA2-213	ENST00000466707	PPP1R42	Q7Z4L9	355 aa		33.31	■■■□□ 2.92
ABCA2-213	ENST00000466707	TRIM35	Q9UPQ4	493 aa		33.31	■■■□□ 2.92
ABCA2-213	ENST00000466707	LDHD	Q86WU2	507 aa		33.3	■■■□□ 2.92
ABCA2-213	ENST00000466707	CRAMP1	Q96RY5	1269 aa		33.3	■■■□□ 2.92
ABCA2-213	ENST00000466707	CC2D2B	Q6DHV5	1058 aa		33.29	■■■□□ 2.92
ABCA2-213	ENST00000466707	RBM17	Q96I25	401 aa	Known RBP	33.29	■■■□□ 2.92
ABCA2-213	ENST00000466707	RNF123	Q5XPI4	1314 aa		33.28	■■■□□ 2.92
ABCA2-213	ENST00000466707	LTBP1	Q14766	1721 aa		33.28	■■■□□ 2.92
ABCA2-213	ENST00000466707	CHL1	O00533	1208 aa		33.28	■■■□□ 2.92
ABCA2-213	ENST00000466707	TCERG1	O14776	1098 aa	Known RBP	33.28	■■■□□ 2.92
ABCA2-213	ENST00000466707	PPEF1	O14829	653 aa	Predicted RBP	33.28	■■■□□ 2.92
ABCA2-213	ENST00000466707	COPS6	Q7L5N1	327 aa		33.28	■■■□□ 2.92
ABCA2-213	ENST00000466707	XAGE3	Q8WTP9	111 aa		33.28	■■■□□ 2.92
ABCA2-213	ENST00000466707	RUNDC1	Q96C34	613 aa		33.28	■■■□□ 2.92
ABCA2-213	ENST00000466707	HACL1	Q9UJ83	578 aa		33.28	■■■□□ 2.92
ABCA2-213	ENST00000466707	AIMP1	Q12904	312 aa	Known RBP	33.27	■■■□□ 2.92
ABCA2-213	ENST00000466707	UTP14A	Q9BVJ6	771 aa	Known RBP	33.27	■■■□□ 2.92
ABCA2-213	ENST00000466707	CREBZF	Q9NS37	354 aa		33.27	■■■□□ 2.92
ABCA2-213	ENST00000466707	PASK	Q96RG2	1323 aa		33.27	■■■□□ 2.92
ABCA2-213	ENST00000466707	WDR43	Q15061	677 aa	Known RBP eCLIP	33.26	■■■□□ 2.91
ABCA2-213	ENST00000466707	EAPP	Q56P03	285 aa	Predicted RBP	33.26	■■■□□ 2.91
ABCA2-213	ENST00000466707	COL13A1	Q5TAT6	717 aa	Predicted RBP	33.26	■■■□□ 2.91
ABCA2-213	ENST00000466707	LAS1L	Q9Y4W2	734 aa	Known RBP	33.25	■■■□□ 2.91
ABCA2-213	ENST00000466707	EPHX2	P34913	555 aa		33.24	■■■□□ 2.91
ABCA2-213	ENST00000466707	SLC10A5	Q5PT55	438 aa		33.24	■■■□□ 2.91
ABCA2-213	ENST00000466707	JDP2	Q8WYK2	163 aa		33.24	■■■□□ 2.91
ABCA2-213	ENST00000466707	NLRP3	Q96P20	1036 aa		33.24	■■■□□ 2.91
ABCA2-213	ENST00000466707	ADAMTS8	Q9UP79	889 aa		33.24	■■■□□ 2.91
ABCA2-213	ENST00000466707	NLRP10	Q86W26	655 aa		33.23	■■■□□ 2.91
ABCA2-213	ENST00000466707	GPC2	Q8N158	579 aa		33.23	■■■□□ 2.91
ABCA2-213	ENST00000466707	DDX21	Q9NR30	783 aa	Known RBP eCLIP	33.23	■■■□□ 2.91
ABCA2-213	ENST00000466707	HSPA1A	P0DMV8	641 aa	Known RBP	33.22	■■■□□ 2.91
ABCA2-213	ENST00000466707	HSPA1B	P0DMV9	641 aa	Known RBP	33.22	■■■□□ 2.91
ABCA2-213	ENST00000466707	CHPF2	Q9P2E5	772 aa		33.22	■■■□□ 2.91
ABCA2-213	ENST00000466707	MKRN1	Q9UHC7	482 aa	Known RBP	33.22	■■■□□ 2.91
ABCA2-213	ENST00000466707	ABCC4	O15439	1325 aa		33.22	■■■□□ 2.91
ABCA2-213	ENST00000466707	TAF1	P21675	1872 aa		33.21	■■■□□ 2.91
ABCA2-213	ENST00000466707	ITGBL1	O95965	494 aa	Predicted RBP	33.21	■■■□□ 2.91
ABCA2-213	ENST00000466707	DDX60	Q8IY21	1712 aa	Known RBP	33.2	■■■□□ 2.91
ABCA2-213	ENST00000466707	LARGE2	Q8N3Y3	721 aa		33.2	■■■□□ 2.91
ABCA2-213	ENST00000466707	HCLS1	P14317	486 aa	Predicted RBP	33.19	■■■□□ 2.9
ABCA2-213	ENST00000466707	GRIPAP1	Q4V328	841 aa		33.19	■■■□□ 2.9
ABCA2-213	ENST00000466707	HSP90AB3P	Q58FF7	597 aa		33.19	■■■□□ 2.9
ABCA2-213	ENST00000466707	GJA3	Q9Y6H8	435 aa		33.19	■■■□□ 2.9
ABCA2-213	ENST00000466707	EIF6	P56537	245 aa	Known RBP	33.18	■■■□□ 2.9
ABCA2-213	ENST00000466707	TCIRG1	Q13488	830 aa		33.18	■■■□□ 2.9
ABCA2-213	ENST00000466707	ZNF428	Q96B54	188 aa		33.18	■■■□□ 2.9
ABCA2-213	ENST00000466707	CLEC11A	Q9Y240	323 aa		33.18	■■■□□ 2.9
ABCA2-213	ENST00000466707	ATP6V0A2	Q9Y487	856 aa		33.18	■■■□□ 2.9
ABCA2-213	ENST00000466707	HDGFL1	Q5TGJ6	251 aa		33.17	■■■□□ 2.9
ABCA2-213	ENST00000466707	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.16	■■■□□ 2.9
ABCA2-213	ENST00000466707	CNTNAP1	P78357	1384 aa		33.16	■■■□□ 2.9
ABCA2-213	ENST00000466707	MAP1S	Q66K74	1059 aa	Predicted RBP	33.15	■■■□□ 2.9
ABCA2-213	ENST00000466707	PNMA8A	Q86V59	439 aa	Predicted RBP	33.15	■■■□□ 2.9
ABCA2-213	ENST00000466707	TRMT112	Q9UI30	125 aa	Known RBP	33.15	■■■□□ 2.9
ABCA2-213	ENST00000466707	PPIP5K2	O43314	1243 aa		33.14	■■■□□ 2.9
ABCA2-213	ENST00000466707	SCNN1D	P51172	638 aa		33.14	■■■□□ 2.9
ABCA2-213	ENST00000466707	AOC3	Q16853	763 aa		33.14	■■■□□ 2.9
ABCA2-213	ENST00000466707	HOXB7	P09629	217 aa		33.13	■■■□□ 2.89
ABCA2-213	ENST00000466707	SH3TC1	Q8TE82	1336 aa		33.12	■■■□□ 2.89
ABCA2-213	ENST00000466707	LRRC37A	A6NMS7	1700 aa		33.12	■■■□□ 2.89
ABCA2-213	ENST00000466707	NIM1K	Q8IY84	436 aa		33.12	■■■□□ 2.89
ABCA2-213	ENST00000466707	CFAP44	Q96MT7	982 aa		33.12	■■■□□ 2.89
ABCA2-213	ENST00000466707	EPS15	P42566	896 aa		33.11	■■■□□ 2.89
ABCA2-213	ENST00000466707	CNTROB	Q8N137	903 aa		33.11	■■■□□ 2.89
ABCA2-213	ENST00000466707	MBIP	Q9NS73	344 aa		33.11	■■■□□ 2.89
ABCA2-213	ENST00000466707	DUOX1	Q9NRD9	1551 aa		33.11	■■■□□ 2.89
ABCA2-213	ENST00000466707	COL4A1	P02462	1669 aa		33.1	■■■□□ 2.89
ABCA2-213	ENST00000466707	TMEM88B	A6NKF7	163 aa		33.1	■■■□□ 2.89
ABCA2-213	ENST00000466707	PLBD2	Q8NHP8	589 aa		33.1	■■■□□ 2.89
ABCA2-213	ENST00000466707	RTFDC1	Q9BY42	306 aa	Predicted RBP	33.1	■■■□□ 2.89
ABCA2-213	ENST00000466707	DUSP27	Q5VZP5	1158 aa		33.09	■■■□□ 2.89
ABCA2-213	ENST00000466707	BBOX1	O75936	387 aa		33.08	■■■□□ 2.89
ABCA2-213	ENST00000466707	LMOD1	P29536	600 aa	Predicted RBP	33.08	■■■□□ 2.89
ABCA2-213	ENST00000466707	SP8	Q8IXZ3	490 aa		33.08	■■■□□ 2.89
ABCA2-213	ENST00000466707	ISCA1	Q9BUE6	129 aa		33.08	■■■□□ 2.89
ABCA2-213	ENST00000466707	TMX4	Q9H1E5	349 aa	Predicted RBP	33.08	■■■□□ 2.89
ABCA2-213	ENST00000466707	DBF4	Q9UBU7	674 aa	Predicted RBP	33.08	■■■□□ 2.89
ABCA2-213	ENST00000466707	GRAP	Q13588	217 aa		33.07	■■■□□ 2.88
ABCA2-213	ENST00000466707	ANKRD13D	Q6ZTN6	518 aa		33.07	■■■□□ 2.88
ABCA2-213	ENST00000466707	DDX46	Q7L014	1031 aa	Known RBP	33.07	■■■□□ 2.88
ABCA2-213	ENST00000466707	GRAPL	Q8TC17	118 aa	Predicted RBP	33.07	■■■□□ 2.88
ABCA2-213	ENST00000466707	ATP5J2-PTCD1	G3V325	749 aa		33.06	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms